New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2855879 =	37 (0.820)	3 (0.070)	3/240	NT	6.7%	noncoding (79/87 nt)	PP_mr36	C4 ncRNA
	?	NC_002947	2855956 =	48 (1.100)					noncoding (2/87 nt)	PP_mr36	C4 ncRNA

AAGCGCGTAATCCGTGGCCTGGATCAGGGTGTCTTCAAGGCAGAGGGACCGGTGGGGTGGGTCTGGAACGATCTTGAGCATGGCGTAACTCCAACGTCGGAAAGTGGAGCTACCTCAACCTTGCTGTCAAACAAGATGGTGGCAGCTGTACGCGGGTTGACAGACCGAGACGTTGGCACTCGGCGCACCACAGGGTGCCCACACGTACAGCCGCCATGAAAGCGAGCACATGAGGACAACGTCAGCGGTCTGTCAAAACCGGTCGCTGAATTGGCAGCGACAGGCCGAG  >  NC_002947/2855740‑2856028                                                                                                                                            |                                                                                                                                                      aaGCGCGTAATCCGTGGCCTGGATCAGGGTGTCTTCAAGGCAGAGGGACCGGTGGGGTGGGTCTGGAACGATCTTGAGCATGGCGTAACTCCAACGTCGGAAAGTGGAGCTACCTCAACCTTGCTGTCAAACAAGATGGTGGCAGCTGTa                                                                                                                                             >  2:810404/1‑150 (MQ=255)      cgTAATCCGTGGCCTGGATCAGGGTGTCTTCAAGGCAGAGGGACCGGTGGGGTGGGTCTGGAACGATCTTGAGCATGGCGTAACTCCAACGTCGGAAAGTGGAGCTACCTCAACCTTGCTGTCAAACAAGATGGTGGCAGCTGTACGCgg                                                                                                                                        <  2:915367/150‑1 (MQ=255)           tCCGTGGCCTGGATCAGGGTGTCTTCAAGGCAGAGGGACCGGCGGGGTGGGTCTGGAACGATCTTGAGCATGGCGTAACTCCAACGTCGGAAAGTGGAGCTACCTCAACCTTGCTGTCAAACAAGATGGTGGCAGCTGTACGCGGGTTGa                                                                                                                                   >  2:38809/1‑150 (MQ=255)                     ggATCAGGGTGTCTTCAAGGCAGAGGGACCGGTGGGGTGGGTCTGGAACGATCTTGAGCATGGCGTAACTCCAACGTCGGAAAGTGGAGCTACCTCAACCTTGCTGTCAAACAAGATGGTGGCAGCTGTACGCGGGTTGACAGACCgaga                                                                                                                         <  1:1005817/150‑1 (MQ=255)                               tgattttcgttgcacatggaaatagtcagccctagtctcggcctgtcgctgccaattcagcgaccggttttgacagaccgctgacgttgtcctcatgtgctcgcttacaTGGc                                                                                                                                                    >  2:1166432‑M1/110‑113 (MQ=255)                               tgattttcgttgcacatggaaatagtcagccctagtctcggcctgtcgctgccaattcagcgaccggttttgacagaccgctgacgttgtcctcatgtgctcgcttacaTGGc                                                                                                                                                    <  1:1166432‑M1/4‑1 (MQ=255)                                     aaGGCAGAGGGACCGGTGGGGTGGGTCTGGAACGATCTTGAGCATGGCGTAACTCCAACGTCGGAAAGTGGAGCTACCTCAACCTTGCTGTCAAACAAGATGGTGGCAGCTGTACGCGGGTTGACAGACCGAGACGTTGGCACTCGgcgc                                                                                                         >  2:306181/1‑150 (MQ=255)                                      aGGCAGAGGGACCGGTGGGGTGGGTCTGGAACGATCTTGAGCATGGCGTAACTCCAACGTCGGAAAGTGGAGCTACCTCAACCTTGCTGTCAAACAAGATGGTGGCAGCTGTACGCGGGTTGACAGACCga                                                                                                                           <  2:263694/131‑1 (MQ=255)                                      aGGCAGAGGGACCGGTGGGGTGGGTCTGGAACGATCTTGAGCATGGCGTAACTCCAACGTCGGAAAGTGGAGCTACCTCAACCTTGCTGTCAAACAAGATGGTGGCAGCTGTACGCGGGTTGACAGACCga                                                                                                                           >  1:263694/1‑131 (MQ=255)                                          agagGGACCGGTGGGGTGGGTCTGGAACGATCTTGAGCATGGCGTAACTCCAACGTCGGAAAGTGGAGCTACCTCAACCTTGCTGTCAAACAAGATGGTGGCAGCTGTACGCGGGTTGACAGACCGAGACGTTgg                                                                                                                   >  1:657176/1‑135 (MQ=255)                                          agagGGACCGGTGGGGTGGGTCTGGAACGATCTTGAGCATGGCGTAACTCCAACGTCGGAAAGTGGAGCTACCTCAACCTTGCTGTCAAACAAGATGGTGGCAGCTGTACGCGGGTTGACAGACCGAGACGTTgg                                                                                                                   <  2:657176/135‑1 (MQ=255)                                                aCCGGTGGGGTGGGTCTGGAACGATCTTGAGCATGGCGTAACTCCAACGTCGGAAAGTGGAGCTACCTCAACCTTGCTGTCAAACAAGATGGTGGCAGCTGTACGCGGGTTGACAGACCGAGACGTGGGCACTCGGCGCACCACAGGGTg                                                                                              <  1:163892/150‑1 (MQ=255)                                                  cGGTGGGGTGGGTCTGGAACGATCTTGAGCATGGCGTAACTCCAACGTCGGAAAGTGGAGCTACCTCAACCTTGCTGTCAAACAAGATGGTGGCAGCTGTACGCGGGTTGACAGACCGAGACGTTgg                                                                                                                   <  1:613001/127‑1 (MQ=255)                                                  cGGTGGGGTGGGTCTGGAACGATCTTGAGCATGGCGTAACTCCAACGTCGGAAAGTGGAGCTACCTCAACCTTGCTGTCAAACAAGATGGTGGCAGCTGTACGCGGGTTGACAGACCGAGACGTTgg                                                                                                                   >  2:613001/1‑127 (MQ=255)                                                         gtgggtCTGGAACGATCTTGAGCATGGCGTAACTCCAACGTCGGAAAGTGGAGCTACCTCAACCTTGCTGTCAAACAAGATGGTGGCAGCTGTACGCGGGTTGACAGACCGAGACGTTGGCACTCGGCGCACCACAGGGTGCCCACACGt                                                                                     >  2:608683/1‑150 (MQ=255)                                                            ggtCTGGAACGATCTTGAGCATGGCGTAACTCCAACGTCGGAAAGTGGAGCTACCTCAACCTTGCTGTCAAACAAGATGGTGGCAGCTGTACGCGGGTTGACAGACCGAGACGTTGGCACTCGGCGCACCACAGGGTGcc                                                                                            <  2:820135/140‑1 (MQ=255)                                                            ggtCTGGAACGATCTTGAGCATGGCGTAACTCCAACGTCGGAAAGTGGAGCTACCTCAACCTTGCTGTCAAACAAGATGGTGGCAGCTGTACGCGGGTTGACAGACCGAGACGTTGGCACTCGGCGCACCACAGGGTGcc                                                                                            >  1:820135/1‑140 (MQ=255)                                                                   ctcggcctgtcgctgccaattcagcgaccggttttgacagaccgctgacgttgtcctcatgtgctcgctttcaTGGCAGCTGTACGCGGGTTGACAGACCGAGACGTTGGCACTCGGCGCACCACAGGGTGCCCACACGTACAGCCGCCa                                                                           >  1:914884‑M1/74‑150 (MQ=255)                                                                                   gCGTACCTCCAACGTCGGAAAGTGGAGCTACCTCAACCTTGCTGTCAAACAAGATGGTGGCAGCTGTACGCGGGTTGACAGACCGAGACGTTGGCACTCGGCGCACCACAGGGTGCCCACACGTACAGCCGCCATGAAAGCGa                                                                  <  1:349517/143‑1 (MQ=255)                                                                                   gCGTAACTCCAACGTCGGAAAGTGGCGCTACCTCAACCTTGCTGTCAAACAAGATGGTGGCAGCTGTACGCGGGTTGACAGACCGAGACGTTGGCACTCGGCGCACCACAGGGTGCCCACACGTACAGCCGCCATGAAAGCGa                                                                  >  2:349517/1‑143 (MQ=255)                                                                                    cGTAACCCAAACCTCGGAAAGTGGAGCTACCTCAACCTTGCTGTCACGCATGGGTTTGGCAGCTGTACGCGGGTTGACAGACCGAGACGTTGGCACTCGGCGCACCACAGGGTGCCCACACGTACAGCCGCCATGAAAGCGAGCACATGa                                                          <  1:676986/150‑1 (MQ=255)                                                                                     gTAACTCCAACGTCGGAAAGTGGAGCTACCTCAACCTTGCTGTCAAACAAGATGGTGGCAGCTGTACGCGGGTTGACAGACCGAGACGTTGGCACTCGGCGCACCACAGGGTGCCCACACGTACAGCCGCCATGAAAGCGAGCACATGAg                                                         >  1:1041321/1‑150 (MQ=255)                                                                                          tCCAACGTCGGAAAGTGGAGCTACCTCAACCTTGCTGTCAAACAAGATGGTGGCAGCTGTACGCGGGTTGACAGACCGAGACGTTGGCACTCGGCGCACCACAGGGTGCCCACACGTACAGCCGCCATGAAAGCGAGCACATGAGGACaa                                                    >  1:255104/1‑150 (MQ=255)                                                                                            cAACGTCGGAAAGTGGAGCTACCTCAACCTTGCTGTCAAACAAGATGGTGGCAGCTGTACGCGGGTTGACAGACCGAGACGTTGGCACTCGGCGCACCACAGGGTGCCCACACGTACAGCCGCCATGAAAGCGAGCACATGAGGa                                                       <  2:722/145‑1 (MQ=255)                                                                                            cAACGTCGGAAAGTGGAGCTACCTCAACCTTGCTGTCAAACAAGATGGTGGCAGCTGTACGCGGGTTGACAGACCGAGACGTTGGCACTCGGCGCACCACAGGGTGCCCACACGTACAGACGCCAGGAAAGCGAGCACATGAGGa                                                       >  1:722/1‑145 (MQ=255)                                                                                             accggttttgacagaccgctgacgttgtcctcatgtgctcgctttcaTGGCAGCTGTACGCGGGTTGACAGACCGAGACGTTGGCACTCGGCGCACCACAGGGTGCCCACACGTACAGCCGCCATGAAAGc                                                                    >  2:992484‑M1/48‑131 (MQ=255)                                                                                             accggttttgacagaccgctgacgttgtcctcatgtgctcgctttcaTGGCAGCTGTACGCGGGTTGACAGACCGAGACGTTGGCACTCGGCGCACCACAGGGTGCCCACACGTACAGCCGCCATGAAAGc                                                                    <  1:992484‑M1/84‑1 (MQ=255)                                                                                                gTCGGAAAGTGGAGCTACCTCAACCTTGCTGTCAAACAAGATGGTGGCAGCTGTACGCGGGTTGACAGACCGAGACGTTGGCACTCGGCGCACCACAGGGTGCCCACACGTACAGCCGCCATGAAAGCGAGCACATGAGGACAACGTCAg                                              <  1:38809/150‑1 (MQ=255)                                                                                                   ggAAAGTGGAGCTACCTCAACCTTGCTGTCAAACAAGATGGTGGCAGCTGTACGCGGGTTGACAGACCGAGACGTTGGCACTCGGCGCACCACAGGGTGCCCACACGTACAGCCGCCATGAAAGCGAGCACATGAGGACAACGTCAGCgg                                           <  2:1025449/150‑1 (MQ=255)                                                                                                                  cTCAACCTTGCTGTCAAACAAGATGGTGGCAGCTGTACGCGGGTTGACAGACCGAGACGTTGGCACTCGGCGCACCACAGGGTGCCCACACGTACAGCCGCCATGaaa                                                                      <  1:953027/108‑1 (MQ=255)                                                                                                                  cTCAACCTTGCTGTCAAACAAGATGGTGGCAGCTGTACGCGGGTTGACAGACCGAGACGTTGGCACTCGGCGCACCACAGGGTGCCCACACGTACAGCCGCCATGaaa                                                                      >  2:953027/1‑108 (MQ=255)                                                                                                                      aCCTTGCTGTCAAACAAGATGATGAAAACTGGACGCAAGCTGATAGAGCGAGAGGTGGGCACCCTGCGCACCACAGGGTGCCCACACGTACAGCCGCCATGAAAGCGAGCACATGAGGACAACGTCAGCGGTCTGTCAAAACCGGTCGCt                        >  2:740834/1‑150 (MQ=255)                                                                                                                               tCAAACAAGATGGTGGCAGCTGTACGCGGGTTGACAGACCGAGACGTTGGCACTCGGCGCACCACAGGGTGCCCACACGTACAGCCGCCATGAAAGCGAGCACATGAGGACAACGTCAGCGGTCTGTCAAAACCGGTCGCTGAATTgg                 <  2:713618/148‑1 (MQ=255)                                                                                                                               tCAAACAAGATGGTGGCAGCTGTACGCGGGTTGACAGACCGAGACGTTGGCACTCGGCGCACCACAGGGTGCCCACACGTACAGCCGCCATGAAAGCGAGCACATGAGGACAACGTCAGCGGTCTGTCAAAACCGGTCGCTGAATTgg                 >  1:713618/1‑148 (MQ=255)                                                                                                                               tCAAACAAGATGGTGGCAGCTGTACGCGGGTTGACAGACCGAGACGTTGGCACTCGGCGCACCACAGGGTGCCCACACGTACAGCCGCCATGAAAGCGAGCACATGAGGACAACGTCAGCGGTCTGTCAAAACCGGTCGCTGAATTGGCa               <  1:608683/150‑1 (MQ=255)                                                                                                                                 aaaCAAGATGGTGGCAGCTGTACGCGGGTTGACAGACCGAGACGTTGGCACTCGGCGCACCACAGGGTGCCCACACGTACAGCCGCCATGAAAGCGAGCACATGAGGACAACGTCAGCGGTCTGTCAAAACCGGTCGCTGAATTGGCAGc             >  1:868899/1‑150 (MQ=255)                                                                                                                                  aaCAAGATGGTGGCAGCTGTACGCGGGTTGACAGACCGAGACGTTGGCACTCGGCGCACCACAGGGTGCCCACACGTACAGCCGCCATGAAAGCGAGCACATGAGGACAGCACCAGCGGTCTGTCAAAACCGGTCGCTGAATTGGCAGCg            >  1:968361/1‑150 (MQ=255)                                                                                                                                  aaCAAGATGGTGGCAGCTGTACGCGGGTTGACAGACCGAGACGTTGGCACTCGGCGCACCACAGGGTGCCCACACGTACAGCCGCCATGAAAGCGAGCACATGAGGACAACGTCAGCGGTCTGTCAAAACCGGTCGCTGAATTGGCAGCg            >  2:1112153/1‑150 (MQ=255)                                                                                                                                    cAAGATGGTGGCAGCTGTACGCGGGTTGACAGACCGAGACGTTGGCACTCGGCGCACCACAGGGTGCCCACACGTACAGCCGCCATGAAAGCGAGCACATGAGGACAACGTCAGc                                             >  1:1139730/1‑115 (MQ=255)                                                                                                                                    cAAGATGGTGGCAGCTGTACGCGGGTTGACAGACCGAGACGTTGGCACTCGGCGCACCACAGGGTGCCCACACGTACAGCCGCCATGAAAGCGAGCACATGAGGACAACGTCAGc                                             <  2:1139730/115‑1 (MQ=255)                                                                                                                                      aGATGGTGGCAGCTGTACGCGGGTTGACAGACCGAGACGTTGGCACTCGGCGCACCACAGGGTGCCCACACGTACAGCCGCCATGAAAGCGAGCACATGAGGACAACGTCAGCGGTCTGTCaaaa                                 >  1:358879/1‑125 (MQ=255)                                                                                                                                      aGATGGTGGCAGCTGTACGCGGGTTGACAGACCGAGACGTTGGCACTCGGCGCACCACAGGGTGCCCACACGTACAGCCGCCATGAAAGCGAGCACATGAGGACAACGTCAGCGGTCTGTCaaaa                                 <  2:358879/125‑1 (MQ=255)                                                                                                                                            TGGCAGCTGTACGCGGGTTGACAGACCGAGACGTTGGCACTCGGCGCACCACAGGGTGCCCACACGTACAGCCGCCATGAAAGCGAGCACATGAGGACAACGTCAGCGGTCTGTCAAAACCGGTCGCTGAATTGGCAGCGACAGGCCgag  <  1:827533‑M1/150‑1 (MQ=255)                                                                                                                                            |                                                                                                                                                      AAGCGCGTAATCCGTGGCCTGGATCAGGGTGTCTTCAAGGCAGAGGGACCGGTGGGGTGGGTCTGGAACGATCTTGAGCATGGCGTAACTCCAACGTCGGAAAGTGGAGCTACCTCAACCTTGCTGTCAAACAAGATGGTGGCAGCTGTACGCGGGTTGACAGACCGAGACGTTGGCACTCGGCGCACCACAGGGTGCCCACACGTACAGCCGCCATGAAAGCGAGCACATGAGGACAACGTCAGCGGTCTGTCAAAACCGGTCGCTGAATTGGCAGCGACAGGCCGAG  >  NC_002947/2855740‑2856028

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.