New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3254059 =49 (1.090)3 (0.070) 3/240 NT 5.9% coding (1722/2202 nt) PP_2852 sulfatase domain‑containing protein
?NC_002947 3254088 = 48 (1.100)coding (1693/2202 nt) PP_2852 sulfatase domain‑containing protein

GATACTGGGCGCCAATGAGGTTGTCGGCCCAGTCATCGTCAATGCGCTTGCGCAACTTGATCGGCGAAGGGCCGCCGAACTGGTAGCGCAGGTTGAGCGGGGTTTGCAGCAAGGATTGGTCGAGTACCACGGCCAAGGCACCGATCTGTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGATGAAGCCCTCACTGGCATAACGCCGGCAGCGCTGTTGGAAGTCACATTCGGTGAACAGGCCCTGGCCGTTGTGGTAGCGCAGCATGCCGTTGGTGTAGGA  >  NC_002947/3253911‑3254208
                                                                                                                                                    |                                                                                                                                                     
gactacgacagcggccgcgagatgatctcctacaccaacggcatgctgcgctaccacaacggccagggcctgttcaccgaatgtgacttccaacagcgctgccggcgttatgccagtgagggcttcatcgccgaccacgcccgctacctt                                                                                                                                                      >  1:219138‑M1/149‑150 (MQ=255)
    cTGGGCGCCAATGAGGTTGTCGGCCCAGTCATCGTCAATGCGCTTGCGCAACTTGATCGGCGAAGGGCCGCCGAACTGGTAGCGCAGGTTGAGCGGGGTTTGCAGCAAGGATTGGTCGAGTACCACGGCCAAGGCACCGATCTGTTGGcc                                                                                                                                                  <  1:476944/150‑1 (MQ=255)
           tcAATGAGTTTGTCGGCCCAGTCATCGTCAATTCGCTTGCGCAACTTGATCGGCGAAGGGCCGCCGAACTGGTAGCGCAGGTTGAGCGGGGTTTGCAGCAAGGATTGGTCGAGTACCACGGCCAAGGCACCGATCTGTTGGCCCAGCAgg                                                                                                                                           <  1:71998/149‑1 (MQ=255)
             aaTGAGGTTGTCGGCCCAGTCATCGTCAATGCGCTTGCGCAACTTGATCGGCGAAGGGCCGCCGAACTGGTAGCGCAGGTTGAGCGGGGTTTGCAGCAAGGATTGGTCGAGTACCACGGCCAAGGCACCGATCTGTTGGCCCAGCAGGCt                                                                                                                                         >  2:968998/1‑150 (MQ=255)
               tGAGGTTGTCGGCCCAGTCATCGTCAATGCGCTTGCGCAACTTGATCGGCGAAGGGCCGCCGAACTGGTAGCGCAGGTTGAGCGGGGTTTGCAGCAAGGATTGGTCGAGTACCACGGCCAAGGCACCGATCTGTTGGCCCAGCAGGCTGt                                                                                                                                       <  2:420134/150‑1 (MQ=255)
                 aGGTTGTCGGCCCAGTCATCGTCAATGCGCTTGCGCAACTTGATCGGCGAAGGGCCGCCGAACTGGTAGCGCAGGTTGAGCGGGGTTTGCAGCAAGGATTGGTCGAGTACCACGGCCAAGGCACCGATCTGTTGGCCCAGCAGGCTGTcg                                                                                                                                     >  2:594759/1‑150 (MQ=255)
                  ggTTGTCGGCCCAGTCATCGTCAATGCGCTTGCGCAACTTGATCGGCGAAGGGCCGCCGAACTGGTAGCGCAGGTTGAGCGGGGTTTGCAGCAAGGATTGGTCGAGTACCACGGCCAAGGCACCGATCTGTTGGCCcagca                                                                                                                                             <  2:917371/141‑1 (MQ=255)
                  ggTTGTCGGCCCAGTCATCGTCAATGCGCTTGCGCAACTTGATCGGCGAAGGGCCGCCGAACTGGTAGCGCAGGTTGAGCGGGGTTTGCAGCAAGGATTGGTCGAGTACCACGGCCAAGGCACCGATCTGTTGGCCcagca                                                                                                                                             >  1:917371/1‑141 (MQ=255)
                  ggTTGTCGGCCCAGTCATCGTCAATGCGCTTGCGCAACTTGATCGGCGAAGGGCCGCCGAACTGGTAGCGCAGGTTGAGCGGGGTTTGCAGCAAGGATTGGTCGAGTACCACGGCCAAGGCACCGATCTGTTGGCCCAGCAGGCTGTcgg                                                                                                                                    <  1:555960/150‑1 (MQ=255)
                       tCGGCCCAGTCATCGTCAATGCGCTTGCGCAACTTGATCGGCGAAGGGCCGCCGAACTGGTAGCGCAGGTTGAGCGGGGTTTGCAGCAAGGATTGGTCGAGTACCACGGCCAAGGCACCGATCTGTTGGCCCAGCAGGCTGTcggccggc                                                                                                                               <  1:594759/150‑1 (MQ=255)
                                   caacggcatgctgcgctaccacaacggccagggcctgttcaccgaatgtgacttccaacagcgctgccggcgttatgccagtgagggcttcatcgccgaccaggcccgctaccTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCgg                                                                                                                   >  1:845290‑M1/114‑150 (MQ=255)
                                        aaTGCGCTTGCGCAACTTGATCGGCGAAGGGCCGCCGAACTGGTAGCGCAGGTTGAGCGGGGTTTGCAGCAAGGATTGGTCGAGTACCACGGCCAAGGCACCGATCTGTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTg                                                                                                              <  1:720129/150‑1 (MQ=255)
                                                    cAACTTGATCGGCGAAGGGCCGCCGAACTGGTAGCGCAGGTTGAGCGGGGTTTGCAGCAAGGATTGGTCGAGTACCACGGCCAAGGCACCGATCTGTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGATGaa                                                                                                  <  2:662107/150‑1 (MQ=255)
                                                       cTTGATCGGCGAAGGGCCGCCGAACTGGTAGCGCAGGTTGAGCGGGGTTTGCAGCAAGGATTGGTCGAGTACCACGGCCAAGGCACCGATCTGTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGATGAAGcc                                                                                               >  2:835335/1‑150 (MQ=255)
                                                        ttGATCGGCGAAGGGCCGCCGAACTGGTAGCGCAGGTTGAGCGGGGTTTGCAGCAAGGATTGGTCGAGTACCACGGCCAAGGCACCGATCTGTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGAt                                                                                                     <  2:594575/143‑1 (MQ=255)
                                                        ttGATCGGCGAAGGGCCGCCGAACTGGTAGCGCAGGTTGAGCGGGGTTTGCAGCAAGGATTGGTCGAGTACCACGGCCAAGGCACCGATCTGTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGAt                                                                                                     >  1:594575/1‑143 (MQ=255)
                                                            tCGGCGAAGGGCCGCCGAACTGGTAGCGCAGGTTGAGCGGGGTTTGCAGCAAGGATTGGTCGAGTACCACGGCCAAGGCACCGATCTGTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGATGAAGCCCTCAc                                                                                          >  1:830584/1‑150 (MQ=255)
                                                            tCGGCGAAGGGCCGCCGAACTGGTAGCGCAGGTTGAGCGGGGTTTGCAGCAAGGATTGGTCGAGTACCACGGCCAAGGCACCGATCTGTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGATGAAGCCCTCAc                                                                                          >  1:658616/1‑150 (MQ=255)
                                                                 gAAGGGCCGCCGAACTGGTAGCGCAGGTTGAGCGGGGTTTGCAGCAAGGATTGGTCGAGTACCACGGCCAAGGCACCGATCTGTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGATGAAGc                                                                                                >  2:1004001/1‑139 (MQ=255)
                                                                 gAAGGGCCGCCGAACTGGTAGCGCAGGTTGAGCGGGGTTTGCAGCAAGGATTGGTCGAGTACCACGGCCAAGGCACCGATCTGTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGATGAAGc                                                                                                <  1:1004001/139‑1 (MQ=255)
                                                                  aaGGGCCGCCGAACTGGTAGCGCAGGTTGAGCGGGGTTTGCAGCAAGGATTGGTCGAGTACCACGGCCAAGGCACCGATCTGTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGATGAAGCCCTCACTGGCAt                                                                                    <  1:165307/150‑1 (MQ=255)
                                                                   aGGGCCGCCGAACTGGTAGCGCAGGTTGAGCGGGGTTTGCAGCAAGGATTGGTCGAGTACCACGGCCAAGGCACCGATCTGTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGATGAAGCCCTCACTGGCATa                                                                                   <  1:968998/150‑1 (MQ=255)
                                                                        cgccgAACTGGTAGCGCAGGTTGAGCGGGGTTTGCAGCAAGGATTGGTCGAGTACCACGGCCAAGGCACCGATCTGTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGATGAAGCCCTCACTGGCATAACGcc                                                                              <  2:761891/150‑1 (MQ=255)
                                                                         gccgAACTGGTAGCGCAGGTTGAGCGGGGTTTGCAGCAAGGATTGGTCGAGTACCACGGCCAAGGCACCGATCTGTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGATGAAGCCCTCACTGGCATAACGCCg                                                                             >  2:981660/1‑150 (MQ=255)
                                                                               cTGGTAGCGCAGGTTGAGCGGGGTTTGCAGCAAGGATTGGTCGAGTACCACGGCCAAGGCACCGATCTGTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGATGAAGCCCTCACTGGCATAACGCCGGCAgcg                                                                       <  1:917989/150‑1 (MQ=255)
                                                                                      cgcAGGTTGAGCGGGGTTTGCAGCAAGGATTGGTCGAGTACCACGGCCAAGGCACCGATCTGTTGGCCCAGCAGGCTGTCggccggcc                                                                                                                              <  1:1132728/88‑1 (MQ=255)
                                                                                      cgcAGGTTGAGCGGGGTTTGCAGCAAGGATTGGTCGAGTACCACGGCCAAGGCACCGATCTGTTGGCCCAGCAGGCTGTCggccggcc                                                                                                                              >  2:1132728/1‑88 (MQ=255)
                                                                                        cAGGTTGAGCGGGGTTTGCAGCAAGGATTGGTCGAGTACCACGGCCAAGGCACCGATCTGTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGATGAAGCCCTCACTGGCATAACGCCGGCAGCGCTGTTGGaa                                                              <  2:606538/150‑1 (MQ=255)
                                                                                                 cGGGGTTTGCAGCAAGGATTGGTCGAGTACCACGGCCAAGGCACCGATCTGTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGATGAAGCCCTCACTGGCATAACGCCGGCAGCGCTGTTGGAAGTCACATTc                                                     >  1:912996/1‑150 (MQ=255)
                                                                                                  ggggTTTGCAGCAAGGATTGGTCGAGTACCACGGCCAAGGCACCGATCTGTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGATGAAGCCCTCACTGGCATAACGCCGGCAGCGCTGTTGGAAGTCACATTCg                                                    >  2:1110987/1‑150 (MQ=255)
                                                                                                  ggggTTTGCAGCAAGGATTGGTCGAGTACCACGGCCAAGGCACCGATCTGTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGATGAAGCCCTCACTGGCATAACGCCGGCAGCGCTGTTGGAAGTCACATTCg                                                    >  1:188109/1‑150 (MQ=255)
                                                                                                   gggTTTGCAGCAAGGATTGGTCGAGTACCACGGCCAAGGCACCGATCTGTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGATGAAGCCCTCACTGGCATAACGCCGGCAGCGCTGTTGGAAGTCACATTCgg                                                   <  1:981660/150‑1 (MQ=255)
                                                                                                   gggTTTGCAGCAAGGATTGGTCGAGTACCACGGCCAAGGCACCGATCTGTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGATGAAGCCCTCACTGGCATAACGCCGGCAGCGCTGTTGGAAGTCACATTCgg                                                   >  2:174933/1‑150 (MQ=255)
                                                                                                    ggTTTGCAGCAAGGATTGGTCGAGTACCACGGCCAAGGCACCGATCTGTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGATGAAGCCCTCACTGGCATAACGCCGGCAGCGCTGTTGGAAGTCACATTCGGt                                                  <  2:569037/150‑1 (MQ=255)
                                                                                                           agcaAGGATTGGTCGAGTACCACGGCCAAGGCACCGATCTGTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGATGAAGCCCTCACTGGCATAACGCCGGCAGCGCTGTTGGAAGTCACATTCGGTGAACAgg                                           >  2:424583/1‑150 (MQ=255)
                                                                                                               gccagtgagggcttcatcgccgaccaggcccgctaccTTGGCCCAGCAGGCTGTCGGCCGGCCCAAgg                                                                                                                         <  1:1191756‑M1/31‑1 (MQ=255)
                                                                                                               gccagtgagggcttcatcgccgaccaggcccgctaccTTGGCCCAGCAGGCTGTCGGCCGGCCCAAgg                                                                                                                         >  2:1191756‑M1/38‑68 (MQ=255)
                                                                                                                       tCGAGTACCACGGCCAAGGCACCGATCTGTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGATGAAGCCCTCACTGGCATAACGCCGGCAGCGCTGTTGGAAGTCACATTCGGTGAACAGGCCCTGGCCGTtg                               >  1:133545/1‑150 (MQ=255)
                                                                                                                       tCGAGTACCACGGCCAAGGCACCGATCTGTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGATGAAGCCCTCACTGGCATAACGCCGGCAGCGCTGTTGGAAGTCACATTCGGTGAACAGGCCCTGGCCGTtg                               >  2:246640/1‑150 (MQ=255)
                                                                                                                         gAGTACCACGGCCAAGGCACCGATCTGTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGATGAAGCCCTCACTGGCATAACGCCGGCAGCGCTGTTGGAAGTCACATTCGGTGAACAGGCCCTGGCCGTtgtg                             <  2:133545/150‑1 (MQ=255)
                                                                                                                         gAGTACCACGGCCAAGGCACCGATCTGTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGATGAAGCCCTCACTGGCATAACGCCGGCAGCGCTGTTGGAAGTCACATTCGGTGAACAGGCCCTGGCCGTtgtg                             >  2:895693/1‑150 (MQ=255)
                                                                                                                          aGTACCACGGCCAAGGCACCGATCTGTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGATGAAGCCCTCACTGGCATAACGCCGGCAGCGCTGTTGGAAGTCACATTCGGTGAACAGGCCCTGGCCGTTGTgg                            <  1:1110987/150‑1 (MQ=255)
                                                                                                                              ccACGGCCAAGGCACCGATCTGTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGATGAAGCCCTCACTGGCa                                                                                     <  1:847786/89‑1 (MQ=255)
                                                                                                                              ccACGGCCAAGGCACCGATCTGTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGATGAAGCCCTCACTGGCa                                                                                     >  2:847786/1‑89 (MQ=255)
                                                                                                                               cACGGCCACAGCAACGATCTGTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGATGAAGCCCTCACTGGCATAACGCCGGCAGCGCTGTTGGAAGTCACATTCGGTGAACAGGCCCTGGCCGTTGTGGTAgcg                       >  2:653398/1‑150 (MQ=255)
                                                                                                                               cACGGCCAAGGCACCGATCTGTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGATGAAGCCCt                                                                                             >  2:456043/1‑80 (MQ=255)
                                                                                                                               cACGGCCAAGGCACCGATCTGTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGATGAAGCCCt                                                                                             <  1:456043/80‑1 (MQ=255)
                                                                                                                                   gCCAAGGCACCGATCTGTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGATGAAGCCCTCACTGGCATAACGCCGGCAGCGCTGTTGGAAGTCACATTCGGTGAACAGGCCCTGGCCGTTGTGGTAGCgcagg                   <  2:830584/150‑2 (MQ=255)
                                                                                                                                      aaGGCACCGATCTGTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGATGAAGCCCTCACTGGCATAACGCCGGCAGCGCTGTTGGAAGTCACATTCGGt                                                  >  2:1186182/1‑116 (MQ=255)
                                                                                                                                      aaGGCACCGATCTGTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGATGAAGCCCTCACTGGCATAACGCCGGCAGCGCTGTTGGAAGTCACATTCGGt                                                  <  1:1186182/116‑1 (MQ=255)
                                                                                                                                         gCACCGATCTGTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGATGAAGCCCTCACTGGCATAACGCCGGCAGCGCTGTTGGAAGTCACATTCGGTGAACAGGCCCTGGCCGTTGTGGTAGCGCAGCATGCCg             >  1:854468/1‑150 (MQ=255)
                                                                                                                                             cGATCTGTTGGCCCAGCAGGCTGTGGGCAGGCCCAAGNTGGAGGACGNGGTCATCGATGAAGGCCTCACGGGCATAGCGCCGGCAGCGCTGTTGGAAGTCACAGTCGGTGAACAGGCCCTGGCCGTTGTGGTAGCGCAACATGGCGTTgg         >  1:329566/1‑150 (MQ=255)
                                                                                                                                             cGATCTGTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGATGAAGCCCTCACTGGCATAACGCCGGCAGCGCTGTTGGAAGTCACATTCGGTGAACAGGCCCTGGCCGTTGTGGTAGCGCAGCATGCCGTTgg         <  1:424583/150‑1 (MQ=255)
                                                                                                                                               aTCTGTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGATGAAGCCCTCACTGGCATAACGCCGGCAGCGCTGTTGGAAGTCACATTCg                                                    <  1:1180144/105‑1 (MQ=255)
                                                                                                                                               aTCTGTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGATGAAGCCCTCACTGGCATAACGCCGGCAGCGCTGTTGGAAGTCACATTCg                                                    >  2:1180144/1‑105 (MQ=255)
                                                                                                                                                    TTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGATGAAGCCCTCACTGGCATAACGCCGGCAGCGCTGTTg                                                                 <  2:1118621‑M1/87‑1 (MQ=255)
                                                                                                                                                    TTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGATGAAGCCCTCACTGGCATAACGCCGGCAGCGCTGTTg                                                                 >  1:1118621‑M1/1‑87 (MQ=255)
                                                                                                                                                    TTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGATGAAGCCCTCACTGGCATAACGCCGGCAGCGCTGTTGGAAGTCACATTCGGTGAACAGGCCCTGGCCGTTGTGGTAGCGCAGCATGCCGTTGGTGTAGga  >  1:835335‑M1/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
GATACTGGGCGCCAATGAGGTTGTCGGCCCAGTCATCGTCAATGCGCTTGCGCAACTTGATCGGCGAAGGGCCGCCGAACTGGTAGCGCAGGTTGAGCGGGGTTTGCAGCAAGGATTGGTCGAGTACCACGGCCAAGGCACCGATCTGTTGGCCCAGCAGGCTGTCGGCCGGCCCAAGGTAGCGGGCCTGGTCGGCGATGAAGCCCTCACTGGCATAACGCCGGCAGCGCTGTTGGAAGTCACATTCGGTGAACAGGCCCTGGCCGTTGTGGTAGCGCAGCATGCCGTTGGTGTAGGA  >  NC_002947/3253911‑3254208

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.