New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4207297 =	34 (0.750)	6 (0.140)	6/234	NT	15.2%	coding (523/6624 nt)	PP_3691	DNA helicase‑related protein
	?	NC_002947	4207320 =	35 (0.820)					coding (500/6624 nt)	PP_3691	DNA helicase‑related protein

CTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATGCCGCAAACCACCCCACTGATTTCGGGGCAGAAGGTCTACGACTTGCTCAATACGTGCAAC  >  NC_002947/4207148‑4207441                                                                                                                                                      |                                                                                                                                                  aaagaagccgagagtggcagaaaggaggttgcacgtattgagcaagtcgtagaccttctgccccgaaatcagtggggtggtttgcggcatattcctgacatgacggctgccttcgttcagccgaatgatccagcagttgaacgactcttg                                                                                                                                                   <  1:541987‑M1/1‑1 (MQ=255)  ttttGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGa                                                                                                                                                  >  2:422642/1‑150 (MQ=255)    ttGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAag                                                                                                                                                <  2:1046634/150‑1 (MQ=255)     tGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAagc                                                                                                                                               <  2:263644/150‑1 (MQ=255)      agccgagagtggcagaaaggaggttgcacgtattgagcaagtcgtagaccttctgccccgaaatcagtggggtggtttgcggcatattcctgacatgacggctgccttcgttcagccgaatgatccagcagttgaacgactcttGAagca                                                                                                                                              <  2:518781‑M1/6‑1 (MQ=255)                ggcagaaaggaggttgcacgtattgagcaagtcgtagaccttctgccccgaaatcagtggggtggtttgcggcatattcctgacatgacggctgccttcgttcagccgaatgatccagcagttgaacgactcttGAAGCAGCTCAGCCGt                                                                                                                                    <  1:946436‑M1/16‑1 (MQ=255)                   aaaGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTg                                                                                                                                >  2:753367/1‑150 (MQ=255)                   aaaGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTg                                                                                                                                >  2:133640/1‑150 (MQ=255)                     aGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCt                                                                                                                              <  1:1165670/150‑1 (MQ=255)                          aggttgcacgtattgagcaagtcgtagaccttctgccccgaaatcagtggggtggtttgcggcatattcctgacatgacggctgccttcgttcagccgaatgatccagcagttgaacgactcttGAAGCAGCTCAGCCGT‑CTGCTTCAag                                                                                                                         >  2:946436‑M1/125‑150 (MQ=255)                           ctggcGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAaga                                                                                                                        <  1:359214/150‑1 (MQ=255)                                  cAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTc                                                                                                                 <  1:422642/150‑1 (MQ=255)                                  cAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTc                                                                                                                 <  1:997942/150‑1 (MQ=255)                                  cAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTc                                                                                                                 <  1:694138/150‑1 (MQ=255)                                    aTGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGAGATGGGGGAAGTTCACTTTGGCGCAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCaa                                                                                                               >  1:317991/1‑150 (MQ=255)                                          tctCGAGCTTCAGCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAActgctg                                                                                                         <  1:51953/148‑1 (MQ=255)                                              gAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCACCACCCTCGTAACCATACAGCGATGAGGACAGTTTATTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGACGTTAAACTGCTGGaga                                                                                                     >  2:51953/1‑148 (MQ=255)                                                  ttCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTc                                                                                                 >  1:1137634/1‑150 (MQ=255)                                                      tCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCt                                                                                             >  2:840149/1‑150 (MQ=255)                                                      tCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGACCAGTTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCt                                                                                             <  1:919227/150‑1 (MQ=255)                                                          tGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAAc                                                                                         <  1:753367/150‑1 (MQ=255)                                                                     tCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCg                                                                              >  2:930338/1‑150 (MQ=255)                                                                              cAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAg                                                                     >  1:411768/1‑150 (MQ=255)                                                                                     gAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATg                                                              <  1:133640/150‑1 (MQ=255)                                                                                                            cACCCTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATGCCGCAAACCACCCCACTGATTTc                                       >  1:352558/1‑150 (MQ=255)                                                                                                              cccTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATGCCGCAAACCACCCCACTGATTTCgg                                     <  2:663878/150‑1 (MQ=255)                                                                                                              cccTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATGCCGCAAACCACCCCACTGATTTCgg                                     <  2:411768/150‑1 (MQ=255)                                                                                                               ccTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATGCCGCAAACCACCCCACTGATTTCggg                                    >  1:518781/1‑150 (MQ=255)                                                                                                               ccTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATGCCGCAAACCACCCCACTGATTTCggg                                    <  2:1137634/150‑1 (MQ=255)                                                                                                               ccTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATGCCGCAAACCACCCCACTGATTTCggg                                    <  1:930338/150‑1 (MQ=255)                                                                                                                    ttcagccgaatgatccagcagttgaacgactcttGAAGCAGCTCAGCCGT‑CTGCtt                                                                                                                             >  1:701430‑M1/35‑56 (MQ=255)                                                                                                                    ttcagccgaatgatccagcagttgaacgactcttGAAGCAGCTCAGCCGT‑CTGCtt                                                                                                                             <  2:701430‑M1/22‑1 (MQ=255)                                                                                                                      aCCATCCAGCGATGAGGACAGTTCACGTTGGCGAAGCAGCTCAGCCGG‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATGCCGCAAACCACCCCACTGATTTAGGGGCAGAAg                             >  2:567263/1‑150 (MQ=255)                                                                                                                       ccATCCTGCGATTAGGACAATTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTGAACTGCTGGATCCTTCGGCTGAACGAAGCCAGCCGTTATGTCAGGAATATGCCGCAAACCGCCCCGCTGATTTCGGGGCAGAAgg                            <  1:240528/150‑1 (MQ=255)                                                                                                                         aTCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATGCCGCAAACCACCCCACTGATTTCGGGGCAGAAGGTc                          <  2:352558/150‑1 (MQ=255)                                                                                                                          tCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATGCCGCAAACCACCCCACTGATTTCGGGGCAGAAGGTCt                         <  1:840149/150‑1 (MQ=255)                                                                                                                                   cagcagttgaacgactcttGAAGCAGA‑CGGCTGAGCTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATg                                                              <  1:295327‑M1/85‑1 (MQ=255)                                                                                                                                   cagcagttgaacgactcttGAAGCAGA‑CGGCTGAGCTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATg                                                              >  2:295327‑M1/20‑104 (MQ=255)                                                                                                                                    aGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTgg                                                                                                        <  2:306291/61‑1 (MQ=255)                                                                                                                                    aGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTgg                                                                                                        >  1:306291/1‑61 (MQ=255)                                                                                                                                     ggACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATGCCGCAAACCACCCCACTGATTTCGGGGCAGAAGGTCTACGACTTGCTc              >  1:489850/1‑150 (MQ=255)                                                                                                                                      gACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGaa                                                                                      >  2:619513/1‑77 (MQ=255)                                                                                                                                      gACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGaa                                                                                      <  1:619513/77‑1 (MQ=255)                                                                                                                                                tttGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATGCCg                                                           >  1:48299/1‑94 (MQ=255)                                                                                                                                                tttGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATGCCg                                                           <  2:48299/94‑1 (MQ=255)                                                                                                                                                 ttGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATGCCGCAAACCACCCCACTGATTTCgg                                     >  2:653857/1‑115 (MQ=255)                                                                                                                                                 ttGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATGCCGCAAACCACCCCACTGATTTCgg                                     <  1:653857/115‑1 (MQ=255)                                                                                                                                                 ttGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATGCCGCAAACCACCCCACTGATTTCGGGGCAGAAGGTCTACGACTTGCTCCATACGTGCAAc  <  2:923998/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                  CTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATGCCGCAAACCACCCCACTGATTTCGGGGCAGAAGGTCTACGACTTGCTCAATACGTGCAAC  >  NC_002947/4207148‑4207441

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.