| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4207297 = | 34 (0.750) | 6 (0.140) | 6/234 | NT | 15.2% | coding (523/6624 nt) | PP_3691 | DNA helicase‑related protein |
| ? | NC_002947 | 4207320 = | 35 (0.820) | coding (500/6624 nt) | PP_3691 | DNA helicase‑related protein | |||||
GCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATGCCGCAAACCACCCCACTGATTTCGGGGCAGAAGGTCTACGACTTGCTCAATACGTGCAACCTCCTTTCTGCCACTCTCGGCTTCTTT > NC_002947/4207173‑4207468 | aggttgcacgtattgagcaagtcgtagaccttctgccccgaaatcagtggggtggtttgcggcatattcctgacatgacggctgccttcgttcagccgaatgatccagcagttgaacgactcttGAAGCAGCTCAGCCGT‑CTGCTTCAag > 2:946436‑M1/125‑150 (MQ=255) ctggcGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAaga < 1:359214/150‑1 (MQ=255) cAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTc < 1:997942/150‑1 (MQ=255) cAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTc < 1:694138/150‑1 (MQ=255) cAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTc < 1:422642/150‑1 (MQ=255) aTGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGAGATGGGGGAAGTTCACTTTGGCGCAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCaa > 1:317991/1‑150 (MQ=255) tctCGAGCTTCAGCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAActgctg < 1:51953/148‑1 (MQ=255) gAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCACCACCCTCGTAACCATACAGCGATGAGGACAGTTTATTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGACGTTAAACTGCTGGaga > 2:51953/1‑148 (MQ=255) ttCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTc > 1:1137634/1‑150 (MQ=255) tCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCt > 2:840149/1‑150 (MQ=255) tCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGACCAGTTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCt < 1:919227/150‑1 (MQ=255) tGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAAc < 1:753367/150‑1 (MQ=255) tCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCg > 2:930338/1‑150 (MQ=255) cAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAg > 1:411768/1‑150 (MQ=255) gAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATg < 1:133640/150‑1 (MQ=255) catattcctgacatgacggctgccttcgttcagccgaatgatccagcagttgaacgactcttgaagcagctcagccgtctgcttcAAGAGTCGTTCAActgctg > 2:295327‑M2/86‑104 (MQ=255) catattcctgacatgacggctgccttcgttcagccgaatgatccagcagttgaacgactcttgaagcagctcagccgtctgcttcAAGAGTCGTTCAActgctg < 1:295327‑M2/19‑1 (MQ=255) cACCCTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATGCCGCAAACCACCCCACTGATTTc > 1:352558/1‑150 (MQ=255) cccTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATGCCGCAAACCACCCCACTGATTTCgg < 2:411768/150‑1 (MQ=255) cccTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATGCCGCAAACCACCCCACTGATTTCgg < 2:663878/150‑1 (MQ=255) ccTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATGCCGCAAACCACCCCACTGATTTCggg < 1:930338/150‑1 (MQ=255) ccTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATGCCGCAAACCACCCCACTGATTTCggg > 1:518781/1‑150 (MQ=255) ccTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATGCCGCAAACCACCCCACTGATTTCggg < 2:1137634/150‑1 (MQ=255) aCCATCCAGCGATGAGGACAGTTCACGTTGGCGAAGCAGCTCAGCCGG‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATGCCGCAAACCACCCCACTGATTTAGGGGCAGAAg > 2:567263/1‑150 (MQ=255) ccATCCTGCGATTAGGACAATTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTGAACTGCTGGATCCTTCGGCTGAACGAAGCCAGCCGTTATGTCAGGAATATGCCGCAAACCGCCCCGCTGATTTCGGGGCAGAAgg < 1:240528/150‑1 (MQ=255) aTCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATGCCGCAAACCACCCCACTGATTTCGGGGCAGAAGGTc < 2:352558/150‑1 (MQ=255) tCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATGCCGCAAACCACCCCACTGATTTCGGGGCAGAAGGTCt < 1:840149/150‑1 (MQ=255) cagcagttgaacgactcttGAAGCAGA‑CGGCTGAGCTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATg > 2:295327‑M1/20‑104 (MQ=255) cagcagttgaacgactcttGAAGCAGA‑CGGCTGAGCTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATg < 1:295327‑M1/85‑1 (MQ=255) aGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTgg < 2:306291/61‑1 (MQ=255) aGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTgg > 1:306291/1‑61 (MQ=255) ggACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATGCCGCAAACCACCCCACTGATTTCGGGGCAGAAGGTCTACGACTTGCTc > 1:489850/1‑150 (MQ=255) gACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGaa < 1:619513/77‑1 (MQ=255) gACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGaa > 2:619513/1‑77 (MQ=255) tttGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATGCCg > 1:48299/1‑94 (MQ=255) tttGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATGCCg < 2:48299/94‑1 (MQ=255) ttGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATGCCGCAAACCACCCCACTGATTTCgg < 1:653857/115‑1 (MQ=255) ttGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATGCCGCAAACCACCCCACTGATTTCgg > 2:653857/1‑115 (MQ=255) ttGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATGCCGCAAACCACCCCACTGATTTCGGGGCAGAAGGTCTACGACTTGCTCCATACGTGCAAc < 2:923998/150‑1 (MQ=255) cttgaagcagacggctgagctgcttcAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATGCCGCAAACCACCCCACTGATTTCGGGGCAGAAGGTCTACGACTTGCTCAATACGTGCAAcct > 2:946436‑M2/27‑150 (MQ=255) aagcagacggctgagctgcttcAAGAGTCGTTCAACTGCTGGATCATTCGGCTGaa < 2:701430‑M2/34‑1 (MQ=255) aagcagacggctgagctgcttcAAGAGTCGTTCAACTGCTGGATCATTCGGCTGaa > 1:701430‑M2/23‑56 (MQ=255) AGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTAAAGCCCTTGAGGCAAACCACCCCACTGATTTCGGGGCAGAAGGTCTACGACTTGCTCAATACGTGCAACCTCCttt < 1:209158‑M1/150‑1 (MQ=255) acggctgagctgcttcAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATGCCGCAAACCACCCCACTGATTTCGGGGCAGAAGGTCTACGACTTGCTCAATACGTGCAACCTCCTTTCTGcc < 1:946436‑M2/134‑1 (MQ=255) aGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATGCCGCAAACCACCCCACTGATTTCGGGGCAGAAGGTCTACGACTTGc < 1:1104945/121‑1 (MQ=255) aGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATGCCGCAAACCACCCCACTGATTTCGGGGCAGAAGGTCTACGACTTGc > 2:1104945/1‑121 (MQ=255) t‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATGCCGCAAACCACCCCACTGATTTCGGGGCAGAAGGTCTACGACTTGCTCAATACGTGCAACCTCCTTTCTGCCACTCTCgg > 2:541987/1‑150 (MQ=255) tgcttcAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATGCCGCAAACCACCCCACTGATTTCGGGGCAGAAGGTCTACGACTTGCTCAATACGTGCAACCTCCTTTCTGCCACTCTCGGct < 2:518781‑M2/144‑1 (MQ=255) cAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATGCCGCAAACCACCCCACTGATTTCGGGGCAGAAGGTCTACGACTTGCTCAATACGTGCAACCTCCTTTCTGCCACTCTCGGCTTCttt < 1:541987‑M2/149‑1 (MQ=255) | GCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTTCACTTTGGCGAAGCAGCTCAGCCGT‑CTGCTTCAAGAGTCGTTCAACTGCTGGATCATTCGGCTGAACGAAGGCAGCCGTCATGTCAGGAATATGCCGCAAACCACCCCACTGATTTCGGGGCAGAAGGTCTACGACTTGCTCAATACGTGCAACCTCCTTTCTGCCACTCTCGGCTTCTTT > NC_002947/4207173‑4207468 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |