New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4794368	37 (0.820)	3 (0.070)	3/238	NT	7.2%	coding (656/984 nt)	PP_4222	protein SyrP
	?	NC_002947	= 4794392	42 (0.970)					coding (632/984 nt)	PP_4222	protein SyrP

ATCGGTGTGCCGTCGCCGTAGTAGACGTTGCGCGGCAAGTCTTCCTCGTCGACGATTTCCAGCAGGCTTTCGCGCACCTCGGCCGGTAGGTTGGAGACATGGAACAGGTGGGCCTGATTGAACCATACCTGATCCCCCGTCCAGGGGTGCGTGGCCACGGCCTGGCAGACCTGGCGCGTGCGCAGCTCACCGTCGTCCTTCCATTCCCAGTCGATGTGGTGCGCGCGGCAATAGGCCTCCACTACGCTGCGGTCCTCGGTGTTGAACACCTGCTCCCAACTCACATCAAGG  >  NC_002947/4794224‑4794514                                                                                                                                                 |                                                                                                                                                   aTCGGTGTGCCGTCGCCGTAGTAGACGTTGCGCGGCAAGTCTTCCTCGTCGACGATTTCCAGCAGGCTTTCGCGCACCTCGGCCGGTAGGTTGGAGACATGGAACAGGTGGGCCTGATTGAACCATACCTGATCCCCCTTCCAGGGGTGc                                                                                                                                               >  2:142434/1‑150 (MQ=255)     gtgtGCCGTCGCCGTAGTAGACGTTGCGCGGCAAGTCTTCCTCGTCGACGATTTCCAGCAGGCTTTCGCGCACCTCGGCCGGTAGGTTGGAGACATGGAACAGGTGGGCCTGATTGAACCATACCTGATCCCCCGTCCAGGGGTGCGTgg                                                                                                                                           <  2:841343/150‑1 (MQ=255)            gTCGCCGTAGTAGACGTTGCGCGGCAAGTCTTCCTCGTCGACGATTTCCAGCAGGCTTTCGCGCACCTCGGCCGGTAGGTTGGAGACATGGAACAGGTGGGCCTGATTGAACCATACCTGATCCCCCGTCCAGGGGTGCGTGGCCACGGc                                                                                                                                    >  2:1170653/1‑150 (MQ=255)                           gTTGCGCGGCAAGTCTTCCTCGTCGACGATTTCCAGCAGGCTTTCGCGCACCTCGGCCGGTAGGTTGGAGACATGGAACAGGTGGGCCTGATTGAACCATACCTGATCCCCCGTCCAGGtctgccaggccgtggccacgcacccctggac                                                                                                                     <  2:1129080‑M1/150‑32 (MQ=255)                              atctggCAAGTCTTCCTCGTCGACGATTTCCAGCAGGCTTTCGCGGCCCTCGGCCGGTAGGTTGGAGACATGGAACAGGTGGGCCTGATTGAACCATACCTGATCCCCCGTCCAGGGGTGCGTGGCCACGGCCTGGCAGACCTGGCGCGt                                                                                                                  <  1:734133/146‑1 (MQ=255)                                     aaGTCTTCCTCGTCGACGATTTCCAGCAGGCTTTCGCGCACCTCGGCCGGTAGGTTGGAGACATGGAACAGGTGGGCCTGATTGAACCATACCTGATCCCCCGTCCAGGGGTGCGTGGCCACGGCCTGGCAGACCTGGCGCGTGCGCAGc                                                                                                           <  2:1067583/150‑1 (MQ=255)                                        tCTTCCTCGTCGACGATTTCCAGCAGGCTTTCGCGCACCTCGGCCGGTAGGTTGGAGACATGGAACAGGTGGGCCTGATTGAACCATACCTGATCCCCCGTCCAGGGGTGCGTGGCCACGGCCTGGCAGACCTGGCGCGTGCGGAGCTCa                                                                                                        <  1:106959/150‑1 (MQ=255)                                        tCTTCCTCGTCGACGATTTCCAGCAGGCTTTCGCGCACCTCGGCCGGTAGGTTGGAGACATGGAACAGGTGGGCCTGATTGAACCATACCTGATCCCCCGTCCAGGGGTGCGTGGCCACGGCCTGGCAGACCTGGCGCGTGCGCAGCTCa                                                                                                        <  1:1170653/150‑1 (MQ=255)                                             cTCGTCGACGATTTCCAGCAGGCTTTCGCGCACCTCGGCCGGTAGGTTGGAGACATGGAACAGGTGGGCCTGATTGAACCATACCTGATCACCCGTCCAGGGGTGCGTGGCCACGGCCTGGCAGACCTGGCGCGTGCGCAGCTCACcgtc                                                                                                   <  2:795186/150‑1 (MQ=255)                                                   gacgaTTTCCAGCAGGCTTTCGCGCACCTCGGCCGGTAGGTTGGAGACATGGAACAGGTGGGCCTGATTGAACCATACCTGATCCCCCGTCCAGGtctgccaggccgtggccacgcaccc                                                                                                                           >  1:248876‑M1/1‑95 (MQ=255)                                                   gacgaTTTCCAGCAGGCTTTCGCGCACCTCGGCCGGTAGGTTGGAGACATGGAACAGGTGGGCCTGATTGAACCATACCTGATCCCCCGTCCAGGtctgccaggccgtggccacgcaccc                                                                                                                           <  2:248876‑M1/120‑26 (MQ=255)                                                   gacgaTTTCCAGCAGGCTTTCGCGCACCTCGGCCGGTAGGTTGGAGACATGGAACAGGTGGGCCTGATTGAACCATACCTGATCCCCCGTCCAGGGGTGCGTGGCCACGGCCTGGCAGACCTGGCGCGTGCGCAGCTCACCGTCGTCCtt                                                                                             <  1:95327/150‑1 (MQ=255)                                                    acgaTTTCCAGCAGGCTTTCGCGCACCTCGGCCGGTAGGTTGGAGACATGGAACAGGTGGGCCTGATTGAACCATACCTGATCCCCCGTCCAGGGGTGCGTGGCCACGGCCTGGCAGACCTGGCGCGTgcg                                                                                                               >  1:642399/1‑131 (MQ=255)                                                    acgaTTTCCAGCAGGCTTTCGCGCACCTCGGCCGGTAGGTTGGAGACATGGAACAGGTGGGCCTGATTGAACCATACCTGATCCCCCGTCCAGGGGTGCGTGGCCACGGCCTGGCAGACCTGGCGCGTgcg                                                                                                               <  2:642399/131‑1 (MQ=255)                                                      gaTTTCCAGCAGGCTTTCGCGCACCTCGGCCGGTAGGTTGGAGACATGGAACAGGTGGGCCTGATTGAACCATACCTGATCCCCCGTCCAGGGGTGCGTGGCCACGGCCTGGCAGACCTGGCGCGTGCGCAGCTCACCGTCGTCCtt                                                                                             <  1:184396/147‑1 (MQ=255)                                                      gaTTTCCAGCAGGCTTTCGCGCACCTCGGCCGGTAGGTTGGAGACATGGAACAGGTGGGCCTGATTGAACCATACCTGATCCCCCGTCCAGGGGTGCGTGGCCACGGCCTGGCAGACCTGGCGCGTGCGCAGCTCACCGTCGTCCtt                                                                                             >  2:184396/1‑147 (MQ=255)                                                          tCCAGCAGGCTTTCGCGCACCTCGGCCGGTAGGTTGGAGACATGGAACAGGTGGGCCTGATTGAACCATACCTGATCCCCCGTCCAGGGGTGCGTGGCCACGGCCTGGCAGACCTGGCGCGTGCGCAGCTCACCGTCGTCCTTCCATTcc                                                                                      >  1:920691/1‑150 (MQ=255)                                                                                    cGGTAGGTTGGAGACATGGAACAGGTGGGCCTGATTGAACCATACCTGATCCCCCGTCCAGGGGTGCGTGGCCACGGCCTGGCAGACCTGGCGCGTGCGCAGCTCACCGTCGTCCt                                                                                              <  1:1139406/116‑1 (MQ=255)                                                                                    cGGTAGGTTGGAGACATGGAACAGGTGGGCCTGATTGAACCATACCTGATCCCCCGTCCAGGGGTGCGTGGCCACGGCCTGGCAGACCTGGCGCGTGCGCAGCTCACCGTCGTCCt                                                                                              >  2:1139406/1‑116 (MQ=255)                                                                                         ggTTGGAGACATGGAACAGGTGGGCCTGATTGAACCATACCTGATCTCAATTCCAGGGGTGCGTGGCCACGGCCTGGCAGACCTGGCGCGTGCGCAGCTCACCGTCGTCCTTCCATTCCCAGTCGATGTGGTGCGCGCGGCAATAGGCCt                                                       >  1:822348/1‑150 (MQ=255)                                                                                              gagaCATGGAACAGGTGGGCCTGATTGAACCATACCTGATCCCCCGTCCAGGGGTGCGTGGCCACGGCCTGGCAGACCTGGCGCGTGCGCAGCTCACCGTCGTCCTTCCATTCCCAGTCGATGTGGTGCGCGCGGCAATAGGCCTCCACt                                                  >  2:842177/1‑150 (MQ=255)                                                                                                   aTGGAACAGGTGGGCCTGATTGAACCATACCTGATCCCCCGTCCAGGGGTGCGTGGCCACGGCCTGGCAGACCTGGCGCGTGCGCAGCTCACCGTCGTCCTTCCATTCCCAGTCGATGTGGTGCGCGCGGCAATAGGcc                                                        <  1:828005/139‑1 (MQ=255)                                                                                                   aTGGAACAGGTGGGCCTGATTGAACCATACCTGATCCCCCGTCCAGGGGTGCGTGGCCACGGCCTGGCAGACCTGGCGCGTGCGCAGCTCACCGTCGTCCTTCCATTCCCAGTCGATGTGGTGCGCGCGGCAATAGGcc                                                        >  2:828005/1‑139 (MQ=255)                                                                                                   aTGGAACAGGTGGGCCTGATTGAACCATACCTGATCCCCCGTCCAGGGGTGCGTGGCCACGGCCTGGCAGACCTGGCGCGTGCGCAGCTCACCGTCGTCCTTCCATTCCCAGTCGATGTGGTGCGCGCGGCAATAGGCCTCCACTACGCt                                             >  2:622648/1‑150 (MQ=255)                                                                                                   aTGGAACAGGTGGGCCTGATTGAACCATACCTGATCCCCCGTCCAGGGGTGCGTGGCCACGGCCTGGCAGACCTGGCGCGTGCGCAGCTCACCGTCGTCCTTCCATTCCCAGTCGATGTGGTGCGCGCGGCAATAGGCCTCCACTACGCt                                             <  1:112139/150‑1 (MQ=255)                                                                                                      gAACAGGTGGGCCTGATTGAACCATACCTGATCCCCCGTCCAGGGGTGCGTGGCCACGGCCTGGCAGACCTGGCGCGTGCGCAGCTCACCGTCGTCCTTCCATTCCCAGTCGATGTGGTGCGCGCGGCAATAGGCCTCCACTACGCTGCg                                          >  2:941145/1‑150 (MQ=255)                                                                                                       aaCAGGTGGGCCTGATTGAACCATACCTGATCCCCCGTCCAGGGGTGCGTGGCCACGGCCTGGCAGACCTGGCGCGTGCGCAGCTCACCGTCGTCCTTCCATTCCCAGTCGATGTGGTGCGCGCGGCAATAGGCCTCCACTACGCTGCgg                                         <  2:614963/150‑1 (MQ=255)                                                                                                            gTGGGCCTGATTGAACCATACCTGATCCCCCGTCCAGGGGTGCGTGGCCACGGCCTGGCAGACCTGGCGCGTGCGCAGCTCACCGTCGTCCTTCCATTCCCAGTCGATGTGGTGCGCGCGGCAATAGGCCTCCACTACGCTGCGGTCCTc                                    >  1:234105/1‑150 (MQ=255)                                                                                                             tGGGCCTGATTGAACCATACCTGATCCCCCGTCCAGGGGTGCGTGGCCACGGCCTGGCAGACCTGGCGCGTGCGCAGCTCACCGTCGTCCTTCCATTCCCAGTCGATGTGGTGCGCGCGGCAATAGGCCTCCACTACGCTGCGGTCCTCg                                   <  1:941145/150‑1 (MQ=255)                                                                                                                gCCTGATTGAACCATACCTGATCCCCCGTCCAGGGGTGCGTGGCCACGGCCTGGCAGACCTGGCGCGTGCGCAGCTCACCGTCGTCCTTCCATTCCCAGTCGATGTGGTGCGCGCGGCAATAGGCCTCCACTACGCTGCGGTCCTCGgtg                                <  1:1163071/150‑1 (MQ=255)                                                                                                                  cTGATTGAACCATACCTGATCCCCCGTCCAGGGGTGCGTGGCCACGGCCTGGCAGACCTGGCGCGTGCGCAGCTCACCGTCGTCCTTCCATTCCCAGTCGAtg                                                                             <  2:779999/103‑1 (MQ=255)                                                                                                                  cTGATTGAACCATACCTGATCCCCCGTCCAGGGGTGCGTGGCCACGGCCTGGCAGACCTGGCGCGTGCGCAGCTCACCGTCGTCCTTCCATTCCCAGTCGAtg                                                                             >  1:779999/1‑103 (MQ=255)                                                                                                                           ccATACCTGATCCCCCGTCCAGGGGTGCGTGGCCACGGCCTGGCAGACCTGGCGCGTGCGCAGCTCACCGTCGTCCTTCCATTCCCAGTCGATGTGGTGCGCGCGGCAATAGGCCTCCACTACGCTGCGGTCCTCGGTGTTGAACACCTg                     >  2:39390/1‑150 (MQ=255)                                                                                                                              tACCTGATCCCCCGTCCAGGGGTGCGTGGCCACGGCCTGGCAGACCTGGCGCGTGCGCAGCTCACCGTCGTCCTTCCATTCCCAGTCGATGTGGTGCGCGCGGCAATAGGCCTCCACTACGCTGCGGTCCTCGGTGTTGAACACCTGCTc                  <  1:39390/150‑1 (MQ=255)                                                                                                                               aCCTGATCCCCCGTCCAGGGGTGCGTGGCCACGGCCTGGCAGACCTGGCGCGTGCGCAGCTCACCGTCGTCCTTCCATTCCCAGTCGATGTGGTGCGCGCGGCAATAGGCCTCCACTACGCTGCGGTCCTCGGTGATAAACACCTGCTcc                 >  2:689128/1‑150 (MQ=255)                                                                                                                                 cTGATCCCCCGTCCAGGGGTGCGTGGCCACGGCCTGGCAGACCTGGCGCGTGCGCAGCTCACCGTCGTCCTTCCATTCCCAGTCGATGTGGTGCGCGCGGCAATAGGCCTc                                                      <  1:1101264/111‑1 (MQ=255)                                                                                                                                 cTGATCCCCCGTCCAGGGGTGCGTGGCCACGGCCTGGCAGACCTGGCGCGTGCGCAGCTCACCGTCGTCCTTCCATTCCCAGTCGATGTGGTGCGCGCGGCAATAGGCCTc                                                      >  2:1101264/1‑111 (MQ=255)                                                                                                                                 cTGATCCCCCGTCCAGGGGTGCGTGGCCACGGCCTGGCAGACCTGGCGCGTGCGCAGCTCACCGTCGTCCTTCCATTCCCAGTCGATGTGGTGCGCGCGGCAATAGGCCTCCACTACGCTGCGGTCCTCGGTGTTGAACACCTGCTCCCa               >  1:944904/1‑150 (MQ=255)                                                                                                                                       ccccGTCCAGGGGTGCGTGGCCACGGCCTGGCAGACCTGGCGCGTGCGCAGCTCACCGTCGTCCTTCCATTTCCAGTCGATGTGGTGCGCGCGGCAATAGGCCTCCACTACGCTGCGGTCCTCGGTGTTGAACACCTGCTCCCAACTcac         >  1:373691/1‑150 (MQ=255)                                                                                                                                       ccccGTCCAGGGGTGCGTGGCCACGGCCTGGCAGACCTGGCGCGTGCGCAGCTCACCGTCGTCCTTCCATTCCCAGTCGATGTGGTGCGCGCGGCAATAGGCCTCCACTACGCTGCGGTCCTCGGTGTTGAACACCTGCTCCCAACTcac         >  1:595454/1‑150 (MQ=255)                                                                                                                                        cccGTCCAGGGGTGCGTGGCCACGGCCTGGCAGACCTGGCGCGTGCGCAGCTCACCGTCGTCCTTCCATTCCCAGTCGATGTGGTGCGCGCGGCAATAGGCCTCCACTACGCTGCGGTCCTCGGTGTTGAACACCTGCTCCCAACTcaca        >  2:986226/1‑150 (MQ=255)                                                                                                                                           gTCCAGGGGTGCGTGGCCACGGCCTGGCAGAcctggacgggggatcaggtatggttcaatcaggcccacctgttccatgtctccaacctaccggccgaggtgcgcgaaagcctgctggaaatcgtcgacgaggaagacttgccgcgcaac     <  2:1129080‑M2/150‑120 (MQ=255)                                                                                                                                              cAGGGGTGCGTGGCCACGGCCTGGCAGACCTGGCGCGTGCGCAGCTCACCGTCGTCCTTCCATTTCCAGTCGATGTGGTGCGCGCGGCAATAGGCCTCCACTACGCTGCGGTCCTCGGTGTTGAACACCTGCTCCCAACTCACATCAAgg  <  2:373691/150‑1 (MQ=255)                                                                                                                                                 gggTGCGTGGCCACGGCCTGGCAGAcctggacgggggatcaggtatggttcaatcaggcccacctgttccatgtctccaacctaccggccgaggtgcgcgaaagcctgctggaaatcgtc                             <  2:248876‑M2/120‑96 (MQ=255)                                                                                                                                                 gggTGCGTGGCCACGGCCTGGCAGAcctggacgggggatcaggtatggttcaatcaggcccacctgttccatgtctccaacctaccggccgaggtgcgcgaaagcctgctggaaatcgtc                             >  1:248876‑M2/1‑25 (MQ=255)                                                                                                                                                 |                                                                                                                                                   ATCGGTGTGCCGTCGCCGTAGTAGACGTTGCGCGGCAAGTCTTCCTCGTCGACGATTTCCAGCAGGCTTTCGCGCACCTCGGCCGGTAGGTTGGAGACATGGAACAGGTGGGCCTGATTGAACCATACCTGATCCCCCGTCCAGGGGTGCGTGGCCACGGCCTGGCAGACCTGGCGCGTGCGCAGCTCACCGTCGTCCTTCCATTCCCAGTCGATGTGGTGCGCGCGGCAATAGGCCTCCACTACGCTGCGGTCCTCGGTGTTGAACACCTGCTCCCAACTCACATCAAGG  >  NC_002947/4794224‑4794514

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.