New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5145922 =	50 (1.110)	5 (0.120)	3/238	NT	10.2%	coding (880/1323 nt)	srmB	ATP‑dependent DEAD‑box RNA helicase
	?	NC_002947	5145955 =	40 (0.920)					coding (847/1323 nt)	srmB	ATP‑dependent DEAD‑box RNA helicase

GCCAGGCCTTCGCCACCGGCACGGCCGGTACGGCCCACACGGTGTACGTACTCGTCACCGCTACGTGGCATGTCGAAGTTGATCACCAGGTCCAGGCCGTCGATATCCAGGCCACGGGCTGCCACGTCGGTCGCCACCAGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCGGTCCTTCTGGTCCTTTTCGCCATGCAGCACGAAAGCCTTCACGTCCTTGGCCACCAGGTGACCGTAGATGCGGTCGGCCATGGCGCGGGTGTTGGTGAAGATGATCGCC  >  NC_002947/5145774‑5146067                                                                                                                                                     |                                                                                                                                                  gCCAGGCCTTCGCCACCGGCACGGCCGGTACGGCCCACACGGTGTACGTACTCGTACACGCTACGTGGCTGGTCGGTGGTGATCACCAGGTCCAGGCCGTCGATATCCAGGCCACGGGCTGCCACGTCGGTCGCCACCAGCACTTTGGAg                                                                                                                                                  >  1:750725/1‑150 (MQ=38)   cAGGTCTTCGCCACCGGCACGGCCGGTACGGCCCACACGGTGTACGTACTCGTCACCGCTACGTGGCATGTCGAAGTTGATCACCAGGTCCAGGCCGTCGATATCCAGGCCACGGGCTGCCACGTCGGTCGCCACCAGCACTTTGGAGCt                                                                                                                                                <  2:1081500/150‑1 (MQ=255)          tCGCCACCGGCACGGCCGGTACGGCCCACACGGTGTACGTACTCGTCACCGCTACGTGGCATGTCGAAGTTGATCACCAGGTCCAGGCCGTCGATATCCAGGCCACGGGCTGCCACGTCGGTCGCCACCAGCACTTTGGAGCTGCCCTGc                                                                                                                                         <  2:1054917/150‑1 (MQ=255)               aCCGGCACGGCCGGTACGGCCCACACGGTGTACGTACTCGTCACCGCTACGTGGCATGTCGAAGTTGATCACCAGGTCCAGGCCGTCGATATCCAGGCCACGGGCTGCCACGTCGGTCGCCACCAGCACTTTGGAGCTGCCCTGCTAGac                                                                                                                                    <  2:952851/150‑2 (MQ=255)                     aaggCCGGTACGGCCCACACGGTGTACGTACTCGTCACCGCTACGTGGCATGTCGAAGTTGATCACCAGGTCCAGGCAGTCTAAGGCTAGGCCACGGGCTGCCACGTCGGTCGCCACCAGCAATTTGGAGCTGCCCTGCTTGAAGCGCTc                                                                                                                              >  1:75069/3‑150 (MQ=255)                       ggCCGGTACGGCCCACACGGTGTACGTACTCGTCACCGCTACGTGGCATGTCGAAGTTGATCACCAGGTCCAGGCCGTCGATATCCAGGCCACGGGCTGCCACGTCGGTCGCCACCAGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGa                                                                                                                            <  2:750725/150‑1 (MQ=255)                              aCGGCCCACACGGTGTACGTACTCGTCACCGCTACGTGGCATGTCGAAGTTGATCACCAGGTCCAGGCCGTCGATATCCAGGCCACGGGCTGCCACGTCGGTCGCCACCAGCACTTTGGAGCTGc                                                                                                                                              >  2:51957/1‑125 (MQ=255)                              aCGGCCCACACGGTGTACGTACTCGTCACCGCTACGTGGCATGTCGAAGTTGATCACCAGGTCCAGGCCGTCGATATCCAGGCCACGGGCTGCCACGTCGGTCGCCACCAGCACTTTGGAGCTGc                                                                                                                                              <  1:51957/125‑1 (MQ=255)                               cGGCCCACACGGTTTAAGTACTCGTCACCGCTACTTGGCATGCCGAAGTTGATCACCAGGTCCAGGCCGTCGATATCCAGGCCACGGGCTGCCACGTCGGTCGCCACCAGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGc                                                                                                                    <  1:488460/150‑1 (MQ=255)                                    ggcgatcatcttcaccaacacccgcgccatggccgaccgcatctacggtcacctggtggccaaggacgtgaaggctttcgtgctgcatggcgaaaaggaccagcaggaccgcaAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCg                                                                                                               >  2:835128‑M1/114‑150 (MQ=255)                                     acacGGTGTACGTACTCGTCACCGCTACGTGGCATGTCGAAGTTGATCACCAGGTCCAGGCCGTCGATATCCAGGCCACCGTTGGCCACGTCGGTCGCCACCAGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCgg                                                                                                              >  1:677845/1‑150 (MQ=255)                                                gtacTCGTCACCGCTACGTGGCATGTCGAAGTTGATCACCAGGTCCAGGCCGTCGATATCCAGGCCACGGGCTGCCACGTCGGTCGCCACCAGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCg                                                                                                               <  1:1175484/138‑1 (MQ=255)                                                gtacTCGTCACCGCTACGTGGCATGTCGAAGTTGATCACCAGGTCCAGGCCGTCGATATCCAGGCCACGGGCTGCCACGTCGGTCGCCACCAGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCg                                                                                                               >  2:1175484/1‑138 (MQ=255)                                                gtacTCGTCACCGCTACGTGGCATGTCGAAGTTGATCACCAGGTCCAGGCCGTCGATATCCAGGCCACGGGCTGCCACGTCGGTCGCCACCAGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCGGTCCTTCTGGTc                                                                                                   <  1:918530/150‑1 (MQ=255)                                                 tacTCGTCACCGCTACGTGGCATGTCGAAGTTGATCACCAGGTCCAGGCCGTCGATATCCAGGCCACGGGCTGCCACGTCGGTCGCCACCAGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCg                                                                                                               >  1:993139/1‑137 (MQ=255)                                                 tacTCGTCACCGCTACGTGGCATGTCGAAGTTGATCACCAGGTCCAGGCCGTCGATATCCAGGCCACGGGCTGCCACGTCGGTCGCCACCAGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCg                                                                                                               <  2:993139/137‑1 (MQ=255)                                                  acTCGTCACCGCTACGTGGCATGTCGAAGTTGATCACCAGGTCCAGGCCGTCGATATCCAGGCCACGGGCTGCCACGTCGGTCGCCACCAGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCGGTCCTTCTGGTCCt                                                                                                 <  1:931256/150‑1 (MQ=255)                                                         aCCGCTACGTGGCATGTCGAAGTTGATCACCAGGTCCAGGCCGTCGATATCCAGGCCACGGGCTGCCACGTCGGTCGCCACCAGCACTTTGGAGCTGccc                                                                                                                                            <  1:165719/100‑1 (MQ=255)                                                         aCCGCTACGTGGCATGTCGAAGTTGATCACCAGGTCCAGGCCGTCGATATCCAGGCCACGGGCTGCCACGTCGGTCGCCACCAGCACTTTGGAGCTGccc                                                                                                                                            >  2:165719/1‑100 (MQ=255)                                                           cGCTACGTGGCATGTCGAAGTTGATCACCAGGTCCAGGCCGTCGATATCCAGGCCACGGGCTGCCACGTCGGTCGCCACCAGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCGGTCCTTCTGGTCCTTTTCGCCAt                                                                                        <  1:1110049/150‑1 (MQ=255)                                                                    gCATGTCGAAGTTGATCACCAGGTCCAGGCCGTCGATATCCAGGCCACGGGCTGCCACGTCGGTCGCCACCAGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCGGTCCTTCTGGTCCTTTTCGACATgca                                                                                     <  2:873828/144‑1 (MQ=255)                                                                    gCATGTCGAAGTTGATCACCAGGTCCAGGCCGTCGATATCCAGGCCACGGGCTGCCACGTCGGTCGCCACCAGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCGGTCCTTCTGGTCCTTTTCGACATgca                                                                                     >  1:873828/1‑144 (MQ=255)                                                                            aaGTTGATCACCAGGTCCAGGCCGTCGATATCCAGCCCACGGGCTGCCACGTCGGTCGCCACCAGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCAAGTCTGCGGTCCTTCTGGTCCTTTTCGCCATGCAGCACGAAAGCCTTc                                                                       <  2:644762/150‑1 (MQ=255)                                                                              gTTGATCACCAGGTCCAGGCCGTCGATATCCAGGCCACGGGCTGCCACGTCGGTCGCCACCAGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCGGTCCTTCTGGTCCTTTTCGCCATGCAGCACGAAAGCCTTCAc                                                                     >  2:707600/1‑150 (MQ=255)                                                                                 gATCACCAGGTCCAGGCCGTCGATATCCAGGCCACGGGCTGCCACGTCGGTCGCCACCAGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCGGTCCTTCTGGTCCTTTTCGCCATGCAGCACGaaa                                                                             >  2:922904/1‑139 (MQ=255)                                                                                 gATCACCAGGTCCAGGCCGTCGATATCCAGGCCACGGGCTGCCACGTCGGTCGCCACCAGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCGGTCCTTCTGGTCCTTTTCGCCATGCAGCACGaaa                                                                             <  1:922904/139‑1 (MQ=255)                                                                                      ccAGGTCCAGGCCGTCGATATCCAGGCCACGGGCTGCCACGTCGGTCGCCACCAGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCGGTCCTTCTGGTCCTTTTCGCCATGCAGCACGAAAGCCTTCACGTCCTTgg                                                             <  2:476208/150‑1 (MQ=255)                                                                                       cAGGTCCAGGCCGTCGATATCCAGGCCACGGGCTGCCACGTCGGTCGCCACCAGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCGGTCCTTc                                                                                                        <  2:263297/106‑1 (MQ=255)                                                                                       cAGGTCCAGGCCGTCGATATCCAGGCCACGGGCTGCCACGTCGGTCGCCACCAGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCGGTCCTTc                                                                                                        >  1:263297/1‑106 (MQ=255)                                                                                       cAGGTCCAGGCCGTCGATATCCAGGCCACGGGCTGCCACGTCGGTCGCCACCAGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCGGTCCTTCTGGTCCTTTTCGCCATGCAGCACGAAAGCCTTCACGTCCtt                                                               >  2:433859/1‑147 (MQ=255)                                                                                       cAGGTCCAGGCCGTCGATATCCAGGCCACGGGCTGCCACGTCGGTCGCCACCAGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCGGTCCTTCTGGTCCTTTTCGCCATGCAGCACGAAAGCCTTCACGTCCtt                                                               <  1:433859/147‑1 (MQ=255)                                                                                         ggTCCAGGCCGTCGATATCCAGGCCACGGGCTGCCACGTCGGTCGCCACCAGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCGGTCCTTCTGGTCCTTTTCGCCATGCAGCACGAAAGCCTTCACGTCCTTGGcca                                                          >  2:1088825/1‑150 (MQ=255)                                                                                           tCCAGGCCGTCGATATCCAGGCCACGGGCTGCCACGTCGGTCGCCACCAGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCGGTCCTTCTGGTCCTTTTCGCCATGCAGCACGAAAGCCTTCACGTCCTTGGccacc                                                        >  2:64312/1‑150 (MQ=255)                                                                                             cAGGCCGTCGATATCCAGGCCACGGGCTGCCACGTCGGTCGCCACCAGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCGGTCCTTCTGGTCCTTTTCGCCATGCAGCACGAAAGCCTTCACGTCCTTGGCCACCAg                                                      >  1:16547/1‑150 (MQ=255)                                                                                                   gTCGATATCCAGGCCACGGGCTGCCACGTCGGTCGCCACCAGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCGGTCCTTCTGGTCCTTTTCGCCATGCAGCACGAAAGCCTTCACTTCCTTGGCCACCAGGTGAcc                                                <  1:844427/150‑1 (MQ=255)                                                                                                    tCGATATCCAGGCCACGGGCTGCCACGTCGGTCGCCACCAGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCGGTCCTTCTGGTCCTTTTCGCCATGCAGCACGAAAGCCTTCACGTCCTTGGCCACCAGGTGACCg                                               >  1:186791/1‑150 (MQ=255)                                                                                                      gATATCCAGGCCACGGGCTGCCACGTCGGTCGCCACCAGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCGGTCCTTCTGGTCCTTTTCGCCATGCAGCACGAAAGCCTTCACGTCCTTGGCCACCAGGTGACCGTa                                             >  1:645841/1‑150 (MQ=255)                                                                                                       atatCCAGGCCACGGGCTGCCACGTCGGTCGCCACCAGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGc                                                                                                                >  1:470521/1‑82 (MQ=255)                                                                                                       atatCCAGGCCACGGGCTGCCACGTCGGTCGCCACCAGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGc                                                                                                                <  2:470521/82‑1 (MQ=255)                                                                                                        tatCCAGGCCACGGGCTGCCACGTCGGTCGCCACCAGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCGGTCCTTCTGGTCCTTTTCGCCATGCAGCACGAAAGCCTTCACGTCCt                                                                >  1:487477/1‑129 (MQ=255)                                                                                                        tatCCAGGCCACGGGCTGCCACGTCGGTCGCCACCAGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCGGTCCTTCTGGTCCTTTTCGCCATGCAGCACGAAAGCCTTCACGTCCt                                                                <  2:487477/129‑1 (MQ=255)                                                                                                         gaaggctttcgtgctgcatggcgaaaaggaccagaaggaccgcaAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGc                                                                                                                <  1:33449‑M1/36‑1 (MQ=255)                                                                                                         gaaggctttcgtgctgcatggcgaaaaggaccagaaggaccgcaAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGc                                                                                                                >  2:33331‑M1/45‑80 (MQ=255)                                                                                                         gaaggctttcgtgctgcatggcgaaaaggaccagaaggaccgcaAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGc                                                                                                                >  2:33449‑M1/45‑80 (MQ=255)                                                                                                         gaaggctttcgtgctgcatggcgaaaaggaccagaaggaccgcaAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGc                                                                                                                <  1:33331‑M1/36‑1 (MQ=255)                                                                                                             aGGCCACGGGCTGCCACGTCGGTCGCCACCAGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCGGTCCTTCTGGTCCTTTTCGCCATGCAGCACGAAAGCCTTCACGTCCTTGGCCACCAGGTGACCGTAGATGCgg                                      <  1:64312/150‑1 (MQ=255)                                                                                                                    gggCTGCCACGTCGGTCGCCACCAGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCGGTCCTTCTGGTCCTTTTCGCCATGCAGCACGAAAGCCTTCACGTCCTTGGCCACCAGGTGACCGTAGATGCGGTCGGCCa                               <  2:842970/150‑1 (MQ=255)                                                                                                                             cGTCGGTCGCCACCAGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCGGTCCTTCTGGTCCTTTTCGCCATGTAGCACGAAAGCCTTCACGTCCTTGGCCACCAGGTGACCGTAGATGCGGTCGGCCATGGCGCggg                      <  2:677845/150‑1 (MQ=255)                                                                                                                                cggtcgCCACCAGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCGGTCCTTCTGGTCCTTTTCGCCATGCAGCACGAAAGCCTTCACGTCCTTGGCCACCAGGTGACCGTAGATGCGGTCGGCCATGGCGCGGgtgt                   >  1:674190/1‑150 (MQ=255)                                                                                                                                  gtcgCCACCAGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCGGTCCTTCTGGTCCTTTTCGCCATGCAGCACGAAAGCCTTCACGTCCTTGGCCACCAGGTGACCGTAGATGCGGTCGGCCATGGCGCGGGTGTTg                 <  2:674190/150‑1 (MQ=255)                                                                                                                                     gCCACCAGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCGGTCCTTCTGGTCCTTTTCGCCACGAGGCAGGATATCCCACATGGGCTGGGCTACCAGGTGTCCGTCGATTCTTTTCGCTATTGCGCGGGTGTTGGTg              >  1:928684/1‑150 (MQ=255)                                                                                                                                      ccaccaGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCGGTTCTTCTGGTCCTTTTCGCCATGCAGCACGAAAGCCTTCACGTCCTTGGCCACCAGGTGACCGTAGATGCGGTCGGCCATGGCGCGGGTGTTGGTGa             >  1:1015912/1‑150 (MQ=255)                                                                                                                                      ccaccaGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCGGTCCTTCTGGTCCTTTTCGCCATGCAGCACGAAAGCCTTCACGTCCTTGGCCACCAGGTGACCGTAGATGCGGTCGGCCATGGCGCGGGTGTTGGt               <  2:507014/148‑1 (MQ=255)                                                                                                                                      ccaccaGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCGGTCCTTCTGGTCCTTTTCGCCATGCAGCACGAAAGCCTTCACGTCCTTGGCCACCAGGTGACCGTAGATGCGGTCGGCCATGGCGCGGGTGTTGGt               >  1:507014/1‑148 (MQ=255)                                                                                                                                        accaGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCGGTCCTTCTGGTCCTTTTCGCCATGCAGCACGAAAGCCTTCACGTCCTTGGCCACCAGGTGACCGTAGATGCGGTCGGCCATGGCGCGGGTGTTGGTGAAg           >  1:212491/1‑150 (MQ=255)                                                                                                                                         ccaGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCGGTCCTTCTGGTCCTTTTCGCCATGCAGCACGAAAGCCTTCACGTCCTTGGCCACCAGGTGACCGTAGATGCGGTCGGCCATGGCGCGGGTGTTGGTGAAga          <  2:16547/150‑1 (MQ=255)                                                                                                                                          caGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCGGTCCTTCTGGTCCTTTTCGCCATGCAGCACGAAAGCCTTCACGTCCTTGGCCACCAGGTGACCGTAGATGCGGTCGGCCATGGCGCGGGTGTTGGTGAAgat         >  1:139982/1‑150 (MQ=255)                                                                                                                                                 ttGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCGGTCCTTCTGGTCCTTTTCGCCATGCAGCACGAAAGCCTTCACGTCCTTGGCCACCAGGTGACCGTAGATGCGGTCGGCCATGGCGCGGGTGTTGGTGAAGATGATCGcc  <  2:1016986/150‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                  GCCAGGCCTTCGCCACCGGCACGGCCGGTACGGCCCACACGGTGTACGTACTCGTCACCGCTACGTGGCATGTCGAAGTTGATCACCAGGTCCAGGCCGTCGATATCCAGGCCACGGGCTGCCACGTCGGTCGCCACCAGCACTTTGGAGCTGCCCTGCTTGAAGCGCTCGATGGCCAGCTTGCGGTCCTTCTGGTCCTTTTCGCCATGCAGCACGAAAGCCTTCACGTCCTTGGCCACCAGGTGACCGTAGATGCGGTCGGCCATGGCGCGGGTGTTGGTGAAGATGATCGCC  >  NC_002947/5145774‑5146067

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.