| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5669477 | 42 (0.930) | 5 (0.120) | 4/220 | NT | 10.3% | intergenic (+27/‑98) | ahcY/metF | adenosylhomocysteinase/5,10‑methylenetetrahydrofolate reductase |
| ? | NC_002947 | = 5669498 | 50 (1.250) | intergenic (+48/‑77) | ahcY/metF | adenosylhomocysteinase/5,10‑methylenetetrahydrofolate reductase | |||||
CCCTGGAAATGGTCCGCGGCTTCGGCGGCGTGGTCACCCAGCTGACCAAGCAGCAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTGCCGCCAGACGCTTGTTGCCAGAGGAACGCCTGATGTCACAAG > NC_002947/5669335‑5669626 | cccTGGAAATGGTCCGCGGCTTCGGCGGCGTGGTCACCCAGCTGACCAAGCAGCAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAg < 2:1176985/150‑1 (MQ=255)cccTGGAAATGGTCCGCGGCTTCGGCGGCGTGGTCACCCAGCTGACCAAGCAGCAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAg > 2:517833/1‑150 (MQ=255) ccTGGAAATGGTCCGCGGCTTCGGCGGCGTGGTCACCCAGCTGACCAAGCAGCAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAgg < 1:958516/150‑1 (MQ=255) gAAATGGTCCGCGGCTTCGGCGGCGTGGTCACCCAGCTGACCAAGCAGCAAGCCGACTACATCGGCGTGACCGTCGAATGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAGGCATa > 1:449020/1‑150 (MQ=255) gcgGCTTCGGCGGCGTGGTCACCCAGCTGACCAAGCAGCAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTt < 2:824972‑M2/150‑2 (MQ=255) gcggcgTGGTCACCCAGCTGACCAAGCAGCAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAacggcacggtatgcctttgcctgccacttgc < 1:194155‑M1/150‑32 (MQ=255) ggcgTGGTCACCCAGCTGACCAAGCAGCAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTtgccacttgcag < 2:154121‑M2/150‑13 (MQ=255) gACCAAGCAGCAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATc < 2:449020/150‑1 (MQ=255) aCCAAGCAGCAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCt > 1:531387/1‑150 (MQ=255) ccAAGAAGTAAGCCGACTACTTCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCtt < 2:66274/150‑1 (MQ=255) cAAGCAGCAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTg > 1:359039/1‑150 (MQ=255) agcagcAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGaa < 2:949622/150‑1 (MQ=255) gcaAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAacggcacggtatgcctttgcctgccacttgca > 2:974199‑M1/1‑91 (MQ=255) gcaAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAacggcacggtatgcctttgcctgccacttgca < 1:974199‑M1/123‑33 (MQ=255) gcaAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAgg < 1:163579/99‑1 (MQ=255) gcaAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAgg > 2:163579/1‑99 (MQ=255) aaGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAacggcacggtatgcctttgcctgccacttgc > 1:490214‑M1/1‑93 (MQ=255) aaGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAacggcacggtatgcctttgcctgccacttgc < 2:490214‑M1/124‑32 (MQ=255) aCTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGAt < 1:307624/132‑1 (MQ=255) aCTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGAt > 2:307624/1‑132 (MQ=255) aCTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGc < 2:1171781/150‑1 (MQ=255) tACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCa < 2:359039/150‑1 (MQ=255) tCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGa > 2:1114136/1‑150 (MQ=255) tCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCAAGACCGGCCATCACCGa > 2:373383/1‑150 (MQ=255) ggCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTgg < 1:154121/150‑1 (MQ=255) gCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGAAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGc > 1:50537/1‑150 (MQ=255) cccGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGATGTTCACCGATCTGGCt < 1:947710/150‑1 (MQ=255) gTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCa > 2:658546/1‑136 (MQ=255) gTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCa < 1:658546/136‑1 (MQ=255) ttCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACATATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTa < 1:517833/150‑1 (MQ=255) ttCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAacgac < 1:277635/113‑1 (MQ=255) ttCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAacgac > 2:277635/1‑113 (MQ=255) aaGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACtt > 2:364636/1‑150 (MQ=255) aGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACCGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTg < 1:988959/150‑1 (MQ=255) gCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGAAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTTGCTGGTACTTGc < 2:50537/150‑1 (MQ=255) cGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAg < 1:1133198/150‑1 (MQ=255) gCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCtt > 1:1044944/1‑98 (MQ=255) gCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCtt < 2:1044944/98‑1 (MQ=255) gCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCtt < 2:1044716/98‑1 (MQ=255) gCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCtt > 1:1044716/1‑98 (MQ=255) gCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGc > 2:205051/1‑137 (MQ=255) gCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGc < 1:205051/137‑1 (MQ=255) gCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTTACCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTgc > 1:1127951/1‑150 (MQ=255) tACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAATCGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTgccgc < 1:259267/150‑1 (MQ=255) gCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTGCCGCCAGACGCTTGTTGCCagag < 1:19965/150‑1 (MQ=255) cTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCTAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTGCCGCCAGACGCTTGTTGCCAGAgg > 2:513796/1‑150 (MQ=255) ttGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCAcc > 2:487018/1‑101 (MQ=255) ttGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCAcc < 1:487018/101‑1 (MQ=255) cTGCAAGT‑‑‑‑GGCAacggcacggtatgcctttgcctgccacttgcagcttcaagcttgccgcttagtagcggtaggcgtgcggcttgaacgggccttcgacggtcacgccgatgtagtcggcttgctgcttggtcagctgggtgaccacgcc < 2:154121‑M1/150‑139 (MQ=255) tGCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTtgccacttgcagcttcaagcttgccgcttagtagcggtaggcgtgcggcttgaacgggccttcgacggtcacgccgatgtagtcggcttgc > 2:974199‑M2/1‑32 (MQ=255) tGCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTtgccacttgcagcttcaagcttgccgcttagtagcggtaggcgtgcggcttgaacgggccttcgacggtcacgccgatgtagtcggcttgc < 1:974199‑M2/123‑92 (MQ=255) tGCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTGCCGCCAGACGCTTGTTGCCAGAGGAACGCCTg > 2:631238/1‑150 (MQ=255) gCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTtgcctgccacttgcagcttcaagcttgccgcttagtagcggtaggcgtgcggcttgaacgggccttcgacggtcacgccgatgtagtcggctt < 2:490214‑M2/124‑94 (MQ=255) gCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTtgcctgccacttgcagcttcaagcttgccgcttagtagcggtaggcgtgcggcttgaacgggccttcgacggtcacgccgatgtagtcggctt > 1:490214‑M2/1‑31 (MQ=255) gCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTtgccacttgcagcttcaagcttgccgcttagtagcggtaggcgtgcggcttgaacgggccttcgacggtcacgccgatgtagtcggcttgctgcttggtcagctgggtgaccacgccgc < 1:194155‑M2/150‑120 (MQ=255) gcaggcaAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTGCCGCCAGACGCTTGTTGCCAGAGGAACGCCTGATGTcaca > 2:808745/1‑150 (MQ=255) caggcaAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTGCCGCCAGACGCTTGTTGCCAGAGGAACGCCTGATGTCACaa > 1:346288/1‑150 (MQ=255) caggcaAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTGCCGCCAGACGCTTGTTGCCAGAGGAACGCCTGATGTCACaa < 1:631238/150‑1 (MQ=255) aggcaAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTGCCGCCAGACGCTTGTTGCCAGAGGAACGCCTGATGTCACAAg > 2:366114/1‑150 (MQ=255) aacggcacggtatgcctttgcctgccacttgcagcttcaagcttgccgcttagtagcggtaggcgtgcggcttgaacgggccttcgacggtcacgccgatgtagtcggcttgctgcttggtcagctgggtgaccacgccgccgaagccgc < 2:824972‑M1/150‑150 (MQ=255) | CCCTGGAAATGGTCCGCGGCTTCGGCGGCGTGGTCACCCAGCTGACCAAGCAGCAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGT‑‑‑‑GGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTGCCGCCAGACGCTTGTTGCCAGAGGAACGCCTGATGTCACAAG > NC_002947/5669335‑5669626 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |