New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5669477 | 42 (0.930) | 5 (0.120) | 4/220 | NT | 10.3% | intergenic (+27/‑98) | ahcY/metF | adenosylhomocysteinase/5,10‑methylenetetrahydrofolate reductase |
? | NC_002947 | = 5669498 | 50 (1.250) | intergenic (+48/‑77) | ahcY/metF | adenosylhomocysteinase/5,10‑methylenetetrahydrofolate reductase |
GCGGCTTCGGCGGCGTGGTCACCCAGCTGACCAAGCAGCAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTGCCGCCAGACGCTTGTTGCCAGAGGAACGCCTGATGTCACAAGAACGCCGCTACAGTTTCGAG > NC_002947/5669350‑5669646 | gcgGCTTCGGCGGCGTGGTCACCCAGCTGACCAAGCAGCAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTt < 2:824972‑M2/150‑2 (MQ=255) ggcgTGGTCACCCAGCTGACCAAGCAGCAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTtgccacttgcag < 2:154121‑M2/150‑13 (MQ=255) gACCAAGCAGCAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATc < 2:449020/150‑1 (MQ=255) aCCAAGCAGCAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCt > 1:531387/1‑150 (MQ=255) ccAAGAAGTAAGCCGACTACTTCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCtt < 2:66274/150‑1 (MQ=255) cAAGCAGCAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTg > 1:359039/1‑150 (MQ=255) agcagcAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGaa < 2:949622/150‑1 (MQ=255) aCTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGAt < 1:307624/132‑1 (MQ=255) aCTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGAt > 2:307624/1‑132 (MQ=255) aCTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGc < 2:1171781/150‑1 (MQ=255) tACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCa < 2:359039/150‑1 (MQ=255) tCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGa > 2:1114136/1‑150 (MQ=255) tCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCAAGACCGGCCATCACCGa > 2:373383/1‑150 (MQ=255) ggCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTgg < 1:154121/150‑1 (MQ=255) gCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGAAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGc > 1:50537/1‑150 (MQ=255) cccGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGATGTTCACCGATCTGGCt < 1:947710/150‑1 (MQ=255) gTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCa > 2:658546/1‑136 (MQ=255) gTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCa < 1:658546/136‑1 (MQ=255) ttCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACATATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTa < 1:517833/150‑1 (MQ=255) ttCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAacgac > 2:277635/1‑113 (MQ=255) ttCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAacgac < 1:277635/113‑1 (MQ=255) aaGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACtt > 2:364636/1‑150 (MQ=255) aGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACCGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTg < 1:988959/150‑1 (MQ=255) gCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGAAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTTGCTGGTACTTGc < 2:50537/150‑1 (MQ=255) cGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAg < 1:1133198/150‑1 (MQ=255) gCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCtt > 1:1044944/1‑98 (MQ=255) gCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCtt < 2:1044944/98‑1 (MQ=255) gCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCtt < 2:1044716/98‑1 (MQ=255) gCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCtt > 1:1044716/1‑98 (MQ=255) gCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGc > 2:205051/1‑137 (MQ=255) gCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGc < 1:205051/137‑1 (MQ=255) gCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTACCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTgc > 1:1127951/1‑150 (MQ=255) tACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAATCGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTgccgc < 1:259267/150‑1 (MQ=255) gCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTGCCGCCAGACGCTTGTTGCCagag < 1:19965/150‑1 (MQ=255) cTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCTAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTGCCGCCAGACGCTTGTTGCCAGAgg > 2:513796/1‑150 (MQ=255) ttGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCAcc < 1:487018/101‑1 (MQ=255) ttGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCAcc > 2:487018/1‑101 (MQ=255) tGCAAGTGGCAGGCAAAGGCATACCGTGCCGTtgccacttgcagcttcaagcttgccgcttagtagcggtaggcgtgcggcttgaacgggccttcgacggtcacgccgatgtagtcggcttgc < 1:974199‑M2/123‑92 (MQ=255) tGCAAGTGGCAGGCAAAGGCATACCGTGCCGTtgccacttgcagcttcaagcttgccgcttagtagcggtaggcgtgcggcttgaacgggccttcgacggtcacgccgatgtagtcggcttgc > 2:974199‑M2/1‑32 (MQ=255) tGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTGCCGCCAGACGCTTGTTGCCAGAGGAACGCCTg > 2:631238/1‑150 (MQ=255) gCAAGTGGCAGGCAAAGGCATACCGTGCCGTtgcctgccacttgcagcttcaagcttgccgcttagtagcggtaggcgtgcggcttgaacgggccttcgacggtcacgccgatgtagtcggctt > 1:490214‑M2/1‑31 (MQ=255) gCAAGTGGCAGGCAAAGGCATACCGTGCCGTtgcctgccacttgcagcttcaagcttgccgcttagtagcggtaggcgtgcggcttgaacgggccttcgacggtcacgccgatgtagtcggctt < 2:490214‑M2/124‑94 (MQ=255) gCAAGTGGCAGGCAAAGGCATACCGTGCCGTtgccacttgcagcttcaagcttgccgcttagtagcggtaggcgtgcggcttgaacgggccttcgacggtcacgccgatgtagtcggcttgctgcttggtcagctgggtgaccacgccgc < 1:194155‑M2/150‑120 (MQ=255) gcaggcaAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTGCCGCCAGACGCTTGTTGCCAGAGGAACGCCTGATGTcaca > 2:808745/1‑150 (MQ=255) caggcaAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTGCCGCCAGACGCTTGTTGCCAGAGGAACGCCTGATGTCACaa < 1:631238/150‑1 (MQ=255) caggcaAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTGCCGCCAGACGCTTGTTGCCAGAGGAACGCCTGATGTCACaa > 1:346288/1‑150 (MQ=255) aggcaAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTGCCGCCAGACGCTTGTTGCCAGAGGAACGCCTGATGTCACAAg > 2:366114/1‑150 (MQ=255) gcaAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTCCTTGCAGCTTGCCGCCAGACGCTTGTTGCCAGAGGAACGCCTGATGTCACAAGaa > 2:1124816/1‑150 (MQ=255) gcaAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTGCCGCCAGACGCTTGTTGCCAGAGGAACGCCTGATGTCACAAGaa > 1:250152/1‑150 (MQ=255) aGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATATTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTGCCGCCAGACGCTTGTTGCCAGAgg < 2:912136/126‑1 (MQ=255) aGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATATTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTGCCGCCAGACGCTTGTTGCCAGAgg > 1:912136/1‑126 (MQ=255) ggCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTGCCGCCAGACGCTTGTTGCCAGAGGAACGCCTGATGTCACAAGAAcgccg > 2:446146/1‑150 (MQ=255) gCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTGCCGCCAGACGCTTGTTGCCATAGGAACGCCTGATGTCACAAGAAcgccgc > 2:399956/1‑150 (MQ=255) gCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTGCCGCCAGACGCTTGTTGCCAGAGGAACGCCTGATGTCACAAGAAcgccgc > 1:843679/1‑150 (MQ=255) ccGTGCCGTTACCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTGCCGCCAGACGCTTGTTGCCAGAGGAACGCCTGATGTCACAAGAACGCCGCTACAg < 2:1127951/150‑1 (MQ=255) cGTTCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAAGGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTGCCGCCAGACGCTTGTTGCCAGAGGAACGCCTGATGTCACAAGAACACCGCTACAGt > 2:406868/1‑150 (MQ=255) cGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTGCCGCCAGACGCTTGTTGCCAGAGGAACGCCTGATGTCACAAGAACGCCGCTACAGt > 2:147925/1‑150 (MQ=255) gCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTGCCGCCAGACGCTTGTTGCCAGAGGAACGCCTGATGTCACAAGAACGCCGCTACAGTTTc < 2:346288/150‑1 (MQ=255) gCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTGCCGCCAGACGCTTGTTGCCAGAGGAACGCCTGATGTCACAAGAACGCCGCTACAGTTTc < 1:1129454/150‑1 (MQ=255) gCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTGCCGCCAGACGCTTGTTGCCAGAGGAACGCCTGATGTCACAAGAACGCCGCTACAGTTTc < 1:513796/150‑1 (MQ=255) cGTTTCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTGCCGCCAGACGCTTGTTGCCAGAGGAACGCCTGATGTCACAAGAACGCCGCTACAGTTTCGa < 1:480135/150‑1 (MQ=255) gTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTGCCGCCAGACGCTTGTTGCCAGAGGAACGCCTGATGTCACAAGAACGCCGCTACAGTTTCGAg < 1:373383/150‑1 (MQ=255) | GCGGCTTCGGCGGCGTGGTCACCCAGCTGACCAAGCAGCAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTGCCGCCAGACGCTTGTTGCCAGAGGAACGCCTGATGTCACAAGAACGCCGCTACAGTTTCGAG > NC_002947/5669350‑5669646 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |