New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5689974 =	63 (1.400)	5 (0.120)	3/238	NT	7.8%	intergenic (‑25/+23)	pilH/pilG	twitching motility protein PilH/pilus biosynthesis/twitching motility protein PilG
	?	NC_002947	5689999 =	57 (1.320)					coding (400/402 nt)	pilG	pilus biosynthesis/twitching motility protein PilG

GGGCCAGGGCCACGCCGTCGGCACCGTTGCTGGCCTTGAGCACCTGGTAGCCGTGCTTTTCCAGCCATTCGGTCAATCTGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGAACTGATCGGAACCGACCACCCGCCCGCGG  >  NC_002947/5689826‑5690117                                                                                                                                                     |                                                                                                                                                tcgtcccgcgatggcctgttcgacaaggcccgcgggcgggtggtcggttccgatcagttcctgaccacgccgttcagcaaggaagaactgctccacgcgatccgcgcccatgtgcccgggtttgccgcacctcaacaaaacgcaccctGa                                                                                                                                                <  1:1061561‑M1/2‑1 (MQ=255)  cgtcccgcgatggcctgttcgacaaggcccgcgggcgggtggtcggttccgatcagttcctgaccaagccgttcagcaaggaagaactgctcgacgcgatccgcgcccatgtgcccgggtttgccgcacctcaacaacacgcaccctGAc                                                                                                                                               >  2:1155483‑M1/148‑150 (MQ=255)    ccagggccaCGCCGTCGGCACCGTTGCTGGCCTTGAGCACCTGGTAGCCGTGCTTTTCCAGCCATTCGGTCAATCTGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACcg                                                                                                                                             >  1:245519/1‑150 (MQ=255)        ggccaCGCCGTCGGCACCGTTGCTGGCCTTGAGCACCTGGTAGCCGTGCTTTTCCAGCCATTCGGTCAATCTGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGcc                                                                                                                                         >  2:1023165/1‑150 (MQ=255)              gCCGTCGGCACCGTTGCTGGCCTTGAGCACCTGGTAGCCGTGCTTTTCCAGCCATTCGGTCAATCTGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCg                                                                                                                                   <  2:1127934/150‑1 (MQ=255)              gCCGTCGGCACCGTTGCTGGCCTTAAGCACCTGGTAGACGTGCTTTTCCAGCCATTCGGTCAATCTGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCg                                                                                                                                   <  1:498777/150‑1 (MQ=255)                     gCACCGTTGCTGGCCTTGAGCACCTGGTAGCCGTGCTTTTCCAGCCATTCGGTCAATCTGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCg                                                                                                                            <  1:469257/150‑1 (MQ=255)                          atgcccgcgggcgggtggcaggttccgacccgttcctgacccagccgtccagcaaggaagcactgctcgacgcgatccgcgcccatgtgcccgggtttgccgcacctcaacaacacgcaccctGACCGCGCCATGGCGGGGCTCGGTCAg                                                                                                                       >  2:1157140‑M1/124‑150 (MQ=255)                           ttGCTGGCCTTGAGCACCTGGTAGCCGTGCTTTTCCAGCCATTCGGTCAATCTGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAgg                                                                                                                      <  2:476426/150‑1 (MQ=255)                            tGCTGGCCTTGAGCACCTGGTAGCCGTGCTTTTCCAGCCATTCGGTCAATCTGTACATCTCTGTTGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAggg                                                                                                                     <  1:159807/150‑1 (MQ=255)                               tGGCCTTGAGCACCTGGTAGCCGTGCTTTTCCAGCCATTCGGTCAATCTGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCTGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGc                                                                                                                  >  2:1020312/1‑150 (MQ=255)                               tGGCCTTGAGCACCTGGTAGCCGTGCTTTTCCAGCCATTCGGTCAATCTGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGc                                                                                                                  >  2:451495/1‑150 (MQ=255)                               tGGCCTTGAGCACCTGGTAGCCGTGCTTTTCCAGCCATTCGGTCAATCTGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGc                                                                                                                  >  1:1180956/1‑150 (MQ=255)                                 gCCTTGAGCACCTGGTAGCCGTGCTTTTCCAGCCATTCGGTCAATCTGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCgt                                                                                                                <  1:4143/150‑1 (MQ=255)                                   cTTGAGCACCTGGTAGCCGTGCTTTTCCAGCCATTCGGCCAATCTGTACATCTCTGTAGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCgtgt                                                                                                              >  2:935976/1‑150 (MQ=255)                                       aGCACCTGGTAGCCGTGCTTTTCCAGCCATTCGGTCAATCTGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTgttgtt                                                                                                          <  2:1181245/150‑1 (MQ=255)                                       aGCACCTGGTAGCCGTGCTTTTCCAGCCATTCGGTCAATCTGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTgttgtt                                                                                                          <  1:589336/150‑1 (MQ=255)                                          aCCTGGTAGCCGTGCTTTTCCAGCCATTCGGTCAATCTGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAg                                                                                                       <  2:548022/150‑1 (MQ=255)                                             tGGTAGCCGTGCTTTTCCAGCCATTCGGTCAATCTGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGAGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTg                                                                                                    >  1:468225/1‑150 (MQ=255)                                               gTAGCCGTGCTTTTCCAGCCATTCGGTCAATCTGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCg                                                                                                  >  2:111652/1‑150 (MQ=255)                                               gTAGCCGTGCTTTTCCAGCCATTCGGTCAATCTGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCg                                                                                                  <  2:1087051/150‑1 (MQ=255)                                                tAGCCGTGCTTTTCCAGCCATTCGGTCAATCTGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCgg                                                                                                 <  1:401689/150‑1 (MQ=255)                                                       gCTTTTCCAGCCATTCGGTCAATCTGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCACAccc                                                                                          >  1:499982/1‑150 (MQ=255)                                                       gCTTTTCCAGCCATTCGGTCAATCTGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAAccc                                                                                          >  1:173070/1‑150 (MQ=255)                                                         ttttCCAGCCATTCGGTCAATCTGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCgg                                                                                        <  2:612319/150‑1 (MQ=255)                                                              cAGCCATTCGGTCAATCTGTACATCTCTGTCGGCGAGTCGTCGAAAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACcgc                                                                                                                                            >  2:899548/1‑93 (MQ=255)                                                              cAGCCATTCGGTCAATCTGTACATCTCTGTCGGCGAGTCGTCGAAAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACcgc                                                                                                                                            <  1:899548/93‑1 (MQ=255)                                                                       ggTCAATCTGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCgg                                                                          <  1:1023165/150‑1 (MQ=255)                                                                               tGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTc                                                                  <  2:1180956/150‑1 (MQ=255)                                                                                 ggaagaactgctcgacgcgatccgcgcccatgtgcccgggtttgccgcacctcaacaacacgcaccctGACCGCGCCATGGCGGGGCTCGGTCAg                                                                                                                       <  1:905773‑M1/27‑1 (MQ=255)                                                                                 ggaagaactgctcgacgcgatccgcgcccatgtgcccgggtttgccgcacctcaacaacacgcaccctGACCGCGCCATGGCGGGGCTCGGTCAg                                                                                                                       >  2:905773‑M1/69‑95 (MQ=255)                                                                                 ggaagaactgctcgacgcgatccgcgcccatgtgcccgggtttgccgcacctcaacaacacgcaccctGACCGCGCCATGGCGGGGCTCGGTCAGGGTGc                                                                                                                  >  1:877336‑M1/69‑100 (MQ=255)                                                                                 ggaagaactgctcgacgcgatccgcgcccatgtgcccgggtttgccgcacctcaacaacacgcaccctGACCGCGCCATGGCGGGGCTCGGTCAGGGTGc                                                                                                                  <  2:877336‑M1/32‑1 (MQ=255)                                                                                    aTCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCa                                                             >  1:25208/1‑150 (MQ=255)                                                                                               cGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTg                                                  <  2:25208/150‑1 (MQ=255)                                                                                                 aGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCt                                                <  2:980801/150‑1 (MQ=255)                                                                                                   tcgtcgACAATCAGAACTCGGGCCACGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGa                                              >  2:899817/1‑150 (MQ=255)                                                                                                     gtcgACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAAc                                            <  2:331301/150‑1 (MQ=255)                                                                                                        gACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGc                                         >  2:758436/1‑150 (MQ=255)                                                                                                         aCAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCCGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGAGGATCGCGTGGAGCAGTTCTTCCTTGCTGAACGGcg                                        >  1:448152/1‑149 (MQ=255)                                                                                                           aaTCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTg                                      <  2:173070/150‑1 (MQ=255)                                                                                                            aTCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTgg                                     >  2:802127/1‑150 (MQ=255)                                                                                                                gAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAg                                 <  1:451495/150‑1 (MQ=255)                                                                                                                 aaCTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAgg                                <  1:111652/150‑1 (MQ=255)                                                                                                                  aCTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGa                               >  1:1075166/1‑150 (MQ=255)                                                                                                                  aCTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGCCGCGGATTGCGTCGGGCAGTTCTCCCTTGCTGAACGGCTTGGTCAGGa                               <  2:499982/150‑1 (MQ=255)                                                                                                                   cTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGaa                              >  1:987032/1‑150 (MQ=255)                                                                                                                   cTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGAGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGaa                              <  2:468225/150‑1 (MQ=255)                                                                                                                    tCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGAAc                             <  2:987032/150‑1 (MQ=255)                                                                                                                      gggCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTgg                                     <  2:691925/140‑1 (MQ=255)                                                                                                                      gggCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTgg                                     >  1:691925/1‑140 (MQ=255)                                                                                                                      gggCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTg                                      >  2:757409/1‑139 (MQ=255)                                                                                                                      gggCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTg                                      <  1:757409/139‑1 (MQ=255)                                                                                                                        gCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGAACTGAt                         <  2:994681/150‑1 (MQ=255)                                                                                                                         ccATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGAACTGATc                        >  2:566982/1‑150 (MQ=255)                                                                                                                             gCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGAACTGATCGGaa                    >  2:515183/1‑150 (MQ=255)                                                                                                                             gCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGAACTGATCGGaa                    <  2:1075166/150‑1 (MQ=255)                                                                                                                              cTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCTCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGAACTGATCGGAAc                   >  2:479061/1‑150 (MQ=255)                                                                                                                               tGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGAACTGATCg                       <  1:1024982/145‑1 (MQ=255)                                                                                                                               tGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGAACTGATCg                       >  2:1024982/1‑145 (MQ=255)                                                                                                                                 tttCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAg                                 >  1:391238/1‑133 (MQ=255)                                                                                                                                 tttCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAg                                 <  2:391238/133‑1 (MQ=255)                                                                                                                                 tttCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGAACTGATCGGAACCGa                >  1:961403/1‑150 (MQ=255)                                                                                                                                  ttCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGAACTGATCGGAACCGac               >  2:803293/1‑150 (MQ=255)                                                                                                                                  ttCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGAACTGATCGGAACCGac               <  2:245519/150‑1 (MQ=255)                                                                                                                                     cccATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGAACTGATCGGAACCGaccac            >  1:813542/1‑150 (MQ=255)                                                                                                                                      ccATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGAACTGATCGGAACCGaccacc           >  2:1120551/1‑150 (MQ=255)                                                                                                                                            ggAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTTTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCTGGAACTGATCGGAACCGACCAcccgcccc     >  2:1061561/1‑149 (MQ=255)                                                                                                                                              aaaGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCtt                                                   <  2:841355/102‑1 (MQ=255)                                                                                                                                              aaaGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCtt                                                   >  1:841355/1‑102 (MQ=255)                                                                                                                                               aaGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCTCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGAACTGATCGGAACCGACCACCCGCCCGCgg  <  1:479061/150‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                GGGCCAGGGCCACGCCGTCGGCACCGTTGCTGGCCTTGAGCACCTGGTAGCCGTGCTTTTCCAGCCATTCGGTCAATCTGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGAACTGATCGGAACCGACCACCCGCCCGCGG  >  NC_002947/5689826‑5690117

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.