New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5689974 =	63 (1.400)	5 (0.120)	3/238	NT	7.8%	intergenic (‑25/+23)	pilH/pilG	twitching motility protein PilH/pilus biosynthesis/twitching motility protein PilG
	?	NC_002947	5689999 =	57 (1.320)					coding (400/402 nt)	pilG	pilus biosynthesis/twitching motility protein PilG

GTTGCTGGCCTTGAGCACCTGGTAGCCGTGCTTTTCCAGCCATTCGGTCAATCTGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGAACTGATCGGAACCGACCACCCGCCCGCGGGCCTTGTCGAACAGGCCATCGCGGGACGA  >  NC_002947/5689851‑5690146                                                                                                                                                     |                                                                                                                                                    atgcccgcgggcgggtggcaggttccgacccgttcctgacccagccgtccagcaaggaagcactgctcgacgcgatccgcgcccatgtgcccgggtttgccgcacctcaacaacacgcaccctGACCGCGCCATGGCGGGGCTCGGTCAg                                                                                                                                                    >  2:1157140‑M1/124‑150 (MQ=255)  ttGCTGGCCTTGAGCACCTGGTAGCCGTGCTTTTCCAGCCATTCGGTCAATCTGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAgg                                                                                                                                                   <  2:476426/150‑1 (MQ=255)   tGCTGGCCTTGAGCACCTGGTAGCCGTGCTTTTCCAGCCATTCGGTCAATCTGTACATCTCTGTTGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAggg                                                                                                                                                  <  1:159807/150‑1 (MQ=255)      tGGCCTTGAGCACCTGGTAGCCGTGCTTTTCCAGCCATTCGGTCAATCTGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCTGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGc                                                                                                                                               >  2:1020312/1‑150 (MQ=255)      tGGCCTTGAGCACCTGGTAGCCGTGCTTTTCCAGCCATTCGGTCAATCTGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGc                                                                                                                                               >  2:451495/1‑150 (MQ=255)      tGGCCTTGAGCACCTGGTAGCCGTGCTTTTCCAGCCATTCGGTCAATCTGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGc                                                                                                                                               >  1:1180956/1‑150 (MQ=255)        gCCTTGAGCACCTGGTAGCCGTGCTTTTCCAGCCATTCGGTCAATCTGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCgt                                                                                                                                             <  1:4143/150‑1 (MQ=255)          cTTGAGCACCTGGTAGCCGTGCTTTTCCAGCCATTCGGCCAATCTGTACATCTCTGTAGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCgtgt                                                                                                                                           >  2:935976/1‑150 (MQ=255)              aGCACCTGGTAGCCGTGCTTTTCCAGCCATTCGGTCAATCTGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTgttgtt                                                                                                                                       <  2:1181245/150‑1 (MQ=255)              aGCACCTGGTAGCCGTGCTTTTCCAGCCATTCGGTCAATCTGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTgttgtt                                                                                                                                       <  1:589336/150‑1 (MQ=255)                 aCCTGGTAGCCGTGCTTTTCCAGCCATTCGGTCAATCTGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAg                                                                                                                                    <  2:548022/150‑1 (MQ=255)                    tGGTAGCCGTGCTTTTCCAGCCATTCGGTCAATCTGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGAGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTg                                                                                                                                 >  1:468225/1‑150 (MQ=255)                      gTAGCCGTGCTTTTCCAGCCATTCGGTCAATCTGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCg                                                                                                                               >  2:111652/1‑150 (MQ=255)                      gTAGCCGTGCTTTTCCAGCCATTCGGTCAATCTGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCg                                                                                                                               <  2:1087051/150‑1 (MQ=255)                       tAGCCGTGCTTTTCCAGCCATTCGGTCAATCTGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCgg                                                                                                                              <  1:401689/150‑1 (MQ=255)                              gCTTTTCCAGCCATTCGGTCAATCTGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCACAccc                                                                                                                       >  1:499982/1‑150 (MQ=255)                              gCTTTTCCAGCCATTCGGTCAATCTGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAAccc                                                                                                                       >  1:173070/1‑150 (MQ=255)                                ttttCCAGCCATTCGGTCAATCTGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCgg                                                                                                                     <  2:612319/150‑1 (MQ=255)                                              ggTCAATCTGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCgg                                                                                                       <  1:1023165/150‑1 (MQ=255)                                                      tGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTc                                                                                               <  2:1180956/150‑1 (MQ=255)                                                        ggaagaactgctcgacgcgatccgcgcccatgtgcccgggtttgccgcacctcaacaacacgcaccctGACCGCGCCATGGCGGGGCTCGGTCAg                                                                                                                                                    >  2:905773‑M1/69‑95 (MQ=255)                                                        ggaagaactgctcgacgcgatccgcgcccatgtgcccgggtttgccgcacctcaacaacacgcaccctGACCGCGCCATGGCGGGGCTCGGTCAg                                                                                                                                                    <  1:905773‑M1/27‑1 (MQ=255)                                                        ggaagaactgctcgacgcgatccgcgcccatgtgcccgggtttgccgcacctcaacaacacgcaccctGACCGCGCCATGGCGGGGCTCGGTCAGGGTGc                                                                                                                                               <  2:877336‑M1/32‑1 (MQ=255)                                                        ggaagaactgctcgacgcgatccgcgcccatgtgcccgggtttgccgcacctcaacaacacgcaccctGACCGCGCCATGGCGGGGCTCGGTCAGGGTGc                                                                                                                                               >  1:877336‑M1/69‑100 (MQ=255)                                                           aTCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCa                                                                                          >  1:25208/1‑150 (MQ=255)                                                                      cGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTg                                                                               <  2:25208/150‑1 (MQ=255)                                                                        aGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCt                                                                             <  2:980801/150‑1 (MQ=255)                                                                          tcgtcgACAATCAGAACTCGGGCCACGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGa                                                                           >  2:899817/1‑150 (MQ=255)                                                                            gtcgACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAAc                                                                         <  2:331301/150‑1 (MQ=255)                                                                               gACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGc                                                                      >  2:758436/1‑150 (MQ=255)                                                                                aCAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCCGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGAGGATCGCGTGGAGCAGTTCTTCCTTGCTGAACGGcg                                                                     >  1:448152/1‑149 (MQ=255)                                                                                  aaTCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTg                                                                   <  2:173070/150‑1 (MQ=255)                                                                                   aTCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTgg                                                                  >  2:802127/1‑150 (MQ=255)                                                                                       gAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAg                                                              <  1:451495/150‑1 (MQ=255)                                                                                        aaCTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAgg                                                             <  1:111652/150‑1 (MQ=255)                                                                                         aCTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGa                                                            >  1:1075166/1‑150 (MQ=255)                                                                                         aCTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGCCGCGGATTGCGTCGGGCAGTTCTCCCTTGCTGAACGGCTTGGTCAGGa                                                            <  2:499982/150‑1 (MQ=255)                                                                                          cTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGaa                                                           >  1:987032/1‑150 (MQ=255)                                                                                          cTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGAGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGaa                                                           <  2:468225/150‑1 (MQ=255)                                                                                           tCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGAAc                                                          <  2:987032/150‑1 (MQ=255)                                                                                             gggCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTgg                                                                  >  1:691925/1‑140 (MQ=255)                                                                                             gggCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTgg                                                                  <  2:691925/140‑1 (MQ=255)                                                                                             gggCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTg                                                                   <  1:757409/139‑1 (MQ=255)                                                                                             gggCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTg                                                                   >  2:757409/1‑139 (MQ=255)                                                                                               gCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGAACTGAt                                                      <  2:994681/150‑1 (MQ=255)                                                                                                ccATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGAACTGATc                                                     >  2:566982/1‑150 (MQ=255)                                                                                                    gCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGAACTGATCGGaa                                                 <  2:1075166/150‑1 (MQ=255)                                                                                                    gCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGAACTGATCGGaa                                                 >  2:515183/1‑150 (MQ=255)                                                                                                     cTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCTCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGAACTGATCGGAAc                                                >  2:479061/1‑150 (MQ=255)                                                                                                      tGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGAACTGATCg                                                    <  1:1024982/145‑1 (MQ=255)                                                                                                      tGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGAACTGATCg                                                    >  2:1024982/1‑145 (MQ=255)                                                                                                        tttCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAg                                                              <  2:391238/133‑1 (MQ=255)                                                                                                        tttCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAg                                                              >  1:391238/1‑133 (MQ=255)                                                                                                        tttCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGAACTGATCGGAACCGa                                             >  1:961403/1‑150 (MQ=255)                                                                                                         ttCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGAACTGATCGGAACCGac                                            >  2:803293/1‑150 (MQ=255)                                                                                                         ttCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGAACTGATCGGAACCGac                                            <  2:245519/150‑1 (MQ=255)                                                                                                            cccATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGAACTGATCGGAACCGaccac                                         >  1:813542/1‑150 (MQ=255)                                                                                                             ccATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGAACTGATCGGAACCGaccacc                                        >  2:1120551/1‑150 (MQ=255)                                                                                                                   ggAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTTTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCTGGAACTGATCGGAACCGACCAcccgcccc                                  >  2:1061561/1‑149 (MQ=255)                                                                                                                     gcaccctgaccgagccccgccatggcgcggtcAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTcc                                                                                  >  1:877336‑M2/33‑100 (MQ=255)                                                                                                                     gcaccctgaccgagccccgccatggcgcggtcAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTcc                                                                                  <  2:877336‑M2/68‑1 (MQ=255)                                                                                                                     aaaGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCtt                                                                                >  1:841355/1‑102 (MQ=255)                                                                                                                     aaaGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCtt                                                                                <  2:841355/102‑1 (MQ=255)                                                                                                                      aaGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCTCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGAACTGATCGGAACCGACCACCCGCCCGCgg                               <  1:479061/150‑1 (MQ=255)                                                                                                                          ctgaccgagccccgccatggcgcggtcAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTcc                                                                                  <  1:905773‑M2/68‑1 (MQ=255)                                                                                                                          ctgaccgagccccgccatggcgcggtcAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTcc                                                                                  >  2:905773‑M2/28‑95 (MQ=255)                                                                                                                          ctgaccgagccccgccatggcgcggtcAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTGCTTCCTTGCTGGACGGCTGGGTCAGGAACGGGTCGGAACCTGCCACCCGCCCGCGggcat                           >  2:1157140‑M2/28‑148 (MQ=255)                                                                                                                              CCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGAACTGATCGGAACCGACCACCCGCCCGCGGGCCTTGTc                       >  2:520916‑M1/1‑150 (MQ=255)                                                                                                                              CCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGAACTGATCGGAACCGACCACCCGCCCGCGGGCCTTGTc                       >  1:515183‑M1/1‑150 (MQ=255)                                                                                                                                   ccATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGAACTGATCGGAACCGGCCACCCGCCCGCGGGCCTTGTCGAACa                  <  1:802127/150‑1 (MQ=255)                                                                                                                                    cATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGAACTGATCGGAACCGACCACCCGCCCGCGGGCCTTGTCGAACAg                 <  1:1120551/150‑1 (MQ=255)                                                                                                                                                  gtcAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGAACTGATCGGAACCGACCACCCGCCCGCGGGCCTTGTCGAACAGGCCATCGCGGgacg   >  2:1155483‑M2/4‑150 (MQ=255)                                                                                                                                                   tcAGGGTGCGTTTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTGGAGCAGTTCTTCCTTGCTGAACGGCGTGGTCAGGAACTGATCGGAACCGACCACCCGCCCGCGGGCCTTGTCGAACAGGCCATCGCGGgacga  <  1:1061561‑M2/148‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                    GTTGCTGGCCTTGAGCACCTGGTAGCCGTGCTTTTCCAGCCATTCGGTCAATCTGTACATCTCTGTCGGCGAGTCGTCGACAATCAGAACTCGGGCCATGCTGTTTCCCCATCAGGAAAGTAGGACCGCGCCATGGCGGGGCTCGGTCAGGGTGCGTGTTGTTGAGGTGCGGCAAACCCGGGCACATGGGCGCGGATCGCGTCGAGCAGTTCTTCCTTGCTGAACGGCTTGGTCAGGAACTGATCGGAACCGACCACCCGCCCGCGGGCCTTGTCGAACAGGCCATCGCGGGACGA  >  NC_002947/5689851‑5690146

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.