| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 189530 = | 40 (0.890) | 4 (0.090) | 4/238 | NT | 9.5% | coding (1639/1947 nt) | PP_0165 | GGDEF domain‑containing protein |
| ? | NC_002947 | 189561 = | 38 (0.880) | coding (1670/1947 nt) | PP_0165 | GGDEF domain‑containing protein | |||||
CCCCAAGGCCCTTCAGCGCGTTTTCGAGCTGCTGGGCCAGAATGCGGCGCTCGGTCCGCGGCTGGTTTTTGAAATTGGCGAGGAGCAGTTGCCTGAGCAGGCAGCGTTGGAGCAACTCACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTCGGTGGGCGCTTCAGCATGATTGGCAACCTGGCGCATTTGGGCCTGGCGTACCTGAA‑G‑ATTGACGGCAGTTACATCCGCAACATCGATCATGAGCAGCACAAGCGGCTGTTCATCGAAGCGATCCAG > NC_002947/189412‑189703 | ccccAAGGCCCTTCAGCGCGTTTTCGAGCTGCTGGGCCAGAATGCGGCGCTCGGTCCGCGGCTGGTTTTTGAAATTGGCGAGGAGCAGTTGCCTGAGCAGGCAGCGTTGGAGCAACTCACCCGGCGCCTGCATGGGCTTGGCTTCGGGtt < 2:1021806/150‑1 (MQ=255) cccAAGGCCCTTCAGCGCGTTTTCGAGCTGCTGGGCCAGAATGCGGCGCTCGGTCCGCGGCTGGTTTTTGAAATTGGCGAGGAGCAGTTGCCTGAGCAGGCAGCGTTGGAGCAACTCACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTg > 1:977333/1‑150 (MQ=255) gctgctcatgatcgatgttgcggatgtaactgccgtcaatcttcaggtacgccaggcccaaatgcgccaggttgccaatcatgctgaagcgcccaccgaagcgttgcaaagccaACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTGGCt > 2:12595‑M1/115‑150 (MQ=255) gCCCTTCAGCGCGTTTTCGAGCTGCTGGGCCAGAATGCGGCGCTCGGTCCGCGGCTGGTTTTTGAAATTGGCGAGGAGCAGTTGCCTGAGCAGGCAGCGTTGGAGCAACTCACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTGGCTTTg < 1:151256/150‑1 (MQ=255) aGCGCGTTTTCGAGCTGCTGGGCCAGAATGCGGCGCTCGGTCCGCGGCTGGTTTTTGAAATTGGCGAGGAGCAGTTGCCTGAGCAGGCAGCGTTGGAGCAACTCACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCt < 1:427136/150‑1 (MQ=255) gcgcGTTTTCGAGCTGCTGGGCCAGAATGCGGCGCTCGGTCCGCGGCTGGTTTTTGAAATTGGCGAGGAGCAGTTGCCTGAGCAGGCAGCGTTGGAGCAACTCACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCtt > 2:899456/1‑150 (MQ=255) gcgcGTTTTCGAGCTGCTGGGCCAGAATGCGGCGCTCGGTCCGCGGCTGGTTTTTGAAATTGGCGAGGAGCAGTTGCCTGAGCAGGCAGCGTTGGAGCAACTCACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCtt < 2:523973/150‑1 (MQ=255) cgcgTTTTCGAGCTGCTGGGCCAGAATGCGGCGCTCGGTCCGCGGCTGGTTTTTGAAATTGGCGAGGAGCAGTTGCCTGAGCAGGCAGCGTTGGAGCAACTCACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTc > 2:531775/1‑150 (MQ=255) cgTTTTCGAGCTGCTGGGCCAGAATGCGGCGCTCGGTCCGCGGCTGGTTTTTGAAATTGGCGAGGAGCAGTTGCCTGAGCAGGCAGCGTTGGAGCAACTCACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTCgg < 2:968062/150‑1 (MQ=255) gTTTTCGAGCTGCTGGGCCAGAATGCGGCGCTCGGTCCGCGGCTGGTTTTTGAAATTGGCGAGGAGCAGTTGCCTGAGCAGGCAGCGTTGGAGCAACTCACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTCGGt < 2:1009967/150‑1 (MQ=255) gAGCTGCTGGGCCAGAATGCGGCGCTCGGTCCGCGGCTGGTTTTTGAAATTGGCGAGGAGCAGTTGCCTGAGCAGGCAGCGTTGGAGCAACTCACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTCGGTGGgcgc > 1:741829/1‑150 (MQ=255) ggCCAGAATGCGGCGCTCGGTCCGCGGCTGGTTTTTGAAATTGGCGAGGAGCAGTTGCCTGAGCAGGCAGCGTTGGAGCAACTCACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTCGGTGGGCGCTTCAGCATg > 2:52437/1‑150 (MQ=255) ccAGAATGCGGCGCTCGGTCCGCGGCTGGTTTTTGAAATTGGCGAGGAGCAGTTGCCTGAGCAGGCAGCGTTGGAGCAACTCACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTCGGTGGGCGCTTCAGCATGAt > 2:875364/1‑150 (MQ=255) ccAGAATGCGGCGCTCGGTCCGCGGCTGGTTTTTGAAATTGGCGAGGAGCAGTTGCCTGAGCAGGCAGCGTTGGAGCAACTCACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTCGGTGGGCGCTTCAGCATGAt > 2:594753/1‑150 (MQ=255) cAGAATGCGGCGCTCGGTCCGCGGCTGGTTTTTGAAATTGGCGAGGAGCAGTTGCCTGAGCAGGCAGCGTTGGAGCTACTCACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTCGGTGGGCGCTTCAGCATGAtt < 1:571513/150‑1 (MQ=255) aatcttcaggtacgccaggcccaaatgcgccaggttgccaatcatgctgaagcgcccaccgaagcgttgcaaagccaACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTg < 1:731726‑M1/33‑1 (MQ=255) aatcttcaggtacgccaggcccaaatgcgccaggttgccaatcatgctgaagcgcccaccgaagcgttgcaaagccaACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTg > 2:731726‑M1/78‑110 (MQ=255) ggcgCTCGGTCCGCGGCTGGTTTTTGAAATTGGCGAGGAGCAGTTGCCTGAGCAGGCAGCGTTGGAGCAACTCACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTCGGTGGGCGCTTCAGCATGATTGGCAACCt > 1:1199/1‑150 (MQ=255) gcTCGGTCCGCGGCTGGTTTTTGAAATTGGCGAGGAGCAGTTGCCTGAGCAGGCAGCGTTGGAGCAACTCACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTCGGTGGGCGCTTCAGCATGATTGGCAACCTGgc < 2:474222/150‑1 (MQ=255) tCCGCGGCTGGTTTTTGAAATTGGCGAGGAGCAGTTGCCTGAGCAGGCAGCGTTGGAGCAACTCACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTCGGTGGGCGCTTCAGCATGATTGGCAACCTGGCGCAttt < 1:700869/150‑1 (MQ=255) cgGCTGGTTTTTGAAATTGGCGAGGAGCAGTTGCCTGAGCAGGCAGCGTTGGAGCAACTCACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTCGGTGGGCGCTTCAGCATGATTGGCAACCTGGCGCATTTGGGc < 1:594753/150‑1 (MQ=255) gCTGGTTTTTGAAATTGGCGAGGAGCAGTTGCCTGAGCAGGCAGCGTTGGAGCAACTCACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTCGGTGGGCGCTTCAGCATGATTGGCAACCTGGCGCATTTGGGCCt < 1:647374/150‑1 (MQ=255) tttGAAATTGGCGAGGAGCAGTTGCCTGAGCAGGCAGCGTTGGAGCAACTCACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTCGGTGGGCGCTTCAGCATGATTGGCAACCTGGCGCATTTGGGCCTGGCGTAc < 2:741829/150‑1 (MQ=255) aaTTGGCGAGGAGCAGTTGCCTGAGCAGGCAGCGTTGGAGCAACTCACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTCGGTGGGCGCTTCAGCATGATTGGCAACCTGGCGCATTTGGGCCTGGCGTACCTGaa < 1:405634/150‑1 (MQ=255) ttGGCGAGGAGCAGTTGCCTGAGCAGGCAGCGTTGGAGCAACTCACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTCGGTGGGCGCTTCAGCATGATTGGCAACCTGGCGCATTTGGGCCTGGCGTACCTGAA‑G‑a > 2:1078612/1‑150 (MQ=255) ttGGCGAGGAGCAGTTGCCTGAGCAGGCAGCGTTGGAGCAACTCACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTCGGTGGGCGCTTCAGCATGATTGGCAACCTGGCGCATTTGGGCCTGGCGTACCTGAA‑G‑a < 1:531775/150‑1 (MQ=255) gCAGTTGCCTGAGCAGGCAGCGTTGGAGCAACTCACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTCGGTGGGCGCTTCAGCATGATTGGCAACCTGGCGCATTTGGGCCTGGCGTACCTGAA‑G‑ATTGACGGCAg < 1:1078612/150‑1 (MQ=255) gCAGTTGCCTGAGCAGGCAGCGTTGGAGCAACTCACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTCGGTGGGCGCTTCAGCATGATTGGCAACCTGGCGCATTTGGGCCTGGCGTACCTGAA‑G‑ATTGACGGCAg < 2:1199/150‑1 (MQ=255) aGTTGCCTGAGCAGGCAGCGTTGGAGCAACTCACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTCGGTGGGCTCTTCAGCATGATTGGCAACCTGGCGCATTTGGGCCTGGCGTACCTGAA‑G‑ATTGACGGCAGtt > 2:982026/1‑150 (MQ=255) gTTGCCTGAGCAGGCAGCGTTGGAGCAACTCACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTCGGTgg > 1:46009/1‑84 (MQ=255) gTTGCCTGAGCAGGCAGCGTTGGAGCAACTCACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTCGGTgg < 2:46009/84‑1 (MQ=255) agCGTTGGAGCAACTCACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTCGGTGGGCGCTTCAGCATGATTGGCAAc < 2:757892/91‑1 (MQ=255) agCGTTGGAGCAACTCACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTCGGTGGGCGCTTCAGCATGATTGGCAAc > 1:757892/1‑91 (MQ=255) ggAGCAACTCACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTCGGTGGGCGCTTCAGCATGATTGGCAACCTGGCGCATTTGGGCCTGGCGTACCTGAA‑G‑ATTGACGGCAGTTACATCCGCAACATCGATCATGa < 1:186844/150‑1 (MQ=255) gAGCAACTCACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTCGGTGGGCGCTTCAGCATGATTGGCAACCTGGCGCATTTGGGCCTGGCGTACCTGAA‑G‑ATTGACGGCAGTTACATCCGCAACATCGATCATGag > 1:967380/1‑150 (MQ=255) agccaacccgaagccaagcccatgcaggcgccgggtTGGCTTTGCAACGCTTCGGTGGGCGCTTCAGCATGATTGGCAACCTGGCGCATTTGGGCCTGGCGTACCTGAA‑G‑ATTGACGGCAGTTACATCCGCAACATCGATCATGagcagc > 2:12595‑M2/37‑150 (MQ=255) caacccgaagccaagcccatgcaggcgccgggtTGGCTTTGCAACGCTTCGGTGGGCGCTTCAGCATGATTGGCAACCTGGCGCATTTGGGCCTGGCGTACCTGAA‑G‑Att < 1:731726‑M2/77‑1 (MQ=255) caacccgaagccaagcccatgcaggcgccgggtTGGCTTTGCAACGCTTCGGTGGGCGCTTCAGCATGATTGGCAACCTGGCGCATTTGGGCCTGGCGTACCTGAA‑G‑Att > 2:731726‑M2/34‑110 (MQ=255) GGCGCCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTCGGTGGGCGCTTCAGGATCCTTCTCAACCTGGCGCATTTGGGCCTGGCGTACATGAA‑G‑ATTGACGGCAGTTACATCCGCAACATCGATCATGAGCAGCACAAGCGGc > 1:875364‑M1/1‑150 (MQ=255) gcgcCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTCGGTGGGCGCTTCAGCATGATTGGCAACCTGGCGCATTTgg > 1:1108076/1‑83 (MQ=255) gcgcCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTCGGTGGGCGCTTCAGCATGATTGGCAACCTGGCGCATTTgg < 2:1108076/83‑1 (MQ=255) gcCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTCGGTGGGCGCTTCAGCATGATTGGCAACCTGGCGCATTTGGGCCTGGCGTACCTGa < 1:923638/96‑1 (MQ=255) gcCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTCGGTGGGCGCTTCAGCATGATTGGCAACCTGGCGCATTTGGGCCTGGCGTACCTGa > 2:923638/1‑96 (MQ=255) cTGCATGGGGTTGGCTTCGGGTTGGCTTTGCAACGCTTCGGTGGGCGCTTCAGCATGATTGGCAACCTGGCGCATTTGGGCCTGGCGTACCTGAA‑G‑ATTGACGGCAGTTACATCCGCAACATCGATCATGAGCAGCACAAGCGGCTGTTc > 2:743732/1‑150 (MQ=255) cTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTCGGTGGGCGCTTCAGCATGGTTGGCAACCTGACGCATTTGGGCCTGGCGTACCTGAA‑G‑ATTGACGGCAGGTACATCCGCAACATCGATCATGAGAAGCACAAGCGGCTGTTc > 1:180376/1‑150 (MQ=255) cTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTCGGTGGGCGCTTCAGCATGATTGGCAACCTGGCGAATTTGGACCTGGCGTACCTGAA‑G‑ATTGACGGCAGTTACATCCGCAACATCGATCATGAGCAGCACAAGCGGCTGTTc > 1:569280/1‑150 (MQ=255) agcccatgcaggcgccgggtTGGCTTTGCAACGCTTCGGTGGGCGCTTCAGCATGATTGGCAACCTGGCGCATTTGGGCCTGGCGTACCTGAA‑G‑ATTGACGGCAGTTACATCCGCAACATCGATCATGAGCAGCACAAGCGGCTGTTCAt < 1:12595‑M2/130‑1 (MQ=255) tGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTCGGTGGGCTCTTCAGCATGATTGGCAACCTGGCGCATTTGGGCCTGGCGTACCTGAA‑G‑ATTGACGGCAGTTACATCCGCAACATCGATCATGAGCAGCACAAGCGGCTGTTCATCGa < 1:982026/150‑1 (MQ=255) gcttCGGGTTGGCTTTGCAACGCTTCGGTGGGCGCTTCAGCATGATTGGCAACCTGGCGCATTTGGGCCTGGCGTACCTGAA‑G‑ATTGACGGCAGTTACATCCGCAACATCGATCATGAGCAGCACAAGCGGCTGTTCATCGAAGCGATcc < 1:743732/150‑1 (MQ=255) ttCGGGTTGGCTTTGCAACGCTTCGGTGGGCGGTTCAGCATGATTGTCAACCGGGCGAATTAGGGCCTTGCGCAACTAATTGCCATGAAG‑‑ACTTAGAGCCGCAACATCGATCATGAGCAGCACAAGCGGCTGTTCATCGAAGCGATCCAg > 1:1178142/1‑150 (MQ=255) ttCGGGTTGGCTTTGCAACGCTTCGGTGGGCGCTTCAGCATGATTGGCAACCTGGCGCATTTGGGCCTGGCGTACCTGAA‑G‑ATTGACGGCAGTTACATCCGCAACATCGATCATGAGCAGCACAAGCGGCTGTTCATCGAAGCGATCCAg < 1:899456/150‑1 (MQ=255) ttCGGGTTGGCTTTGCAACGCTTCGGTGGGCGCTTCAGCATGATTGGCAACCTGGCGCATTTGGGCCTGGCGTACCTGAA‑G‑ATTGACGGCAGTTACATCCGCAACATCGATCATGAGCAGCACAAGCGGCTGTTCATCGAAGCGATCCAg > 1:860791/1‑150 (MQ=255) | CCCCAAGGCCCTTCAGCGCGTTTTCGAGCTGCTGGGCCAGAATGCGGCGCTCGGTCCGCGGCTGGTTTTTGAAATTGGCGAGGAGCAGTTGCCTGAGCAGGCAGCGTTGGAGCAACTCACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTCGGTGGGCGCTTCAGCATGATTGGCAACCTGGCGCATTTGGGCCTGGCGTACCTGAA‑G‑ATTGACGGCAGTTACATCCGCAACATCGATCATGAGCAGCACAAGCGGCTGTTCATCGAAGCGATCCAG > NC_002947/189412‑189703 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |