New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 403253	56 (1.240)	7 (0.170)	7/228	NT	11.5%	intergenic (‑53/+116)	msrA/PP_0337	peptide methionine sulfoxide reductase MsrA/sensory box protein
	?	NC_002947	= 403315	56 (1.350)					intergenic (‑115/+54)	msrA/PP_0337	peptide methionine sulfoxide reductase MsrA/sensory box protein

ACCAGGATTTCCGAACGCAGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTCGCGCCCGGGAATCGGCCGGTCGAACAGGTAGCCCTGGCCCACGTC  >  NC_002947/403175‑403461                                                                                                                                              |                                                                                                                                                   aCCAGGATTTCCGAACGCAGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGtgcccgcga                                                                                                                                           <  2:220042‑M2/150‑10 (MQ=255) aCCAGGATTTCCGAACGCAGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGtgcccgcga                                                                                                                                           <  1:1190542‑M2/150‑10 (MQ=255) aCCAGGATTTCCGAACGCAGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGtgcccgcga                                                                                                                                           <  1:141262‑M2/150‑10 (MQ=255)   cAGGATTTCCGAACGCAGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGaaa                                                                                                                                         >  2:418386/1‑150 (MQ=255)   cAGGATTTCCGAACGCAGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGaaa                                                                                                                                         >  1:410130/1‑150 (MQ=255)    aGGATTTCCGAACGCAGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAg                                                                                                                                        <  2:346101/150‑1 (MQ=255)     ggATTTTCGATCGCAGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAgg                                                                                                                                       <  1:168291/150‑1 (MQ=255)        tttCCGAACGCAGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGcc                                                                                                                                    <  2:410130/150‑1 (MQ=255)           ccGAACGCAGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGa                                                                                                                                 >  2:1077931/1‑150 (MQ=255)                cGCAGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGc                                                                                                                            <  1:879931/150‑1 (MQ=255)                   aGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTATGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTc                                                                                                                         <  1:62987/150‑1 (MQ=255)                   aGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTc                                                                                                                         <  1:220042/150‑1 (MQ=255)                    ggACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCt                                                                                                                        >  2:916236/1‑150 (MQ=255)                    ggACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCt                                                                                                                        >  2:1087827/1‑150 (MQ=255)                    ggACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCACCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCctct                                                                                                                        >  1:1030388/1‑150 (MQ=255)                       ccATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCtata                                                                                                                     <  2:141262/150‑1 (MQ=255)                       ccATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCtata                                                                                                                     <  1:1077931/150‑1 (MQ=255)                         aTGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGt                                                                                                                   <  1:188333/150‑1 (MQ=255)                               gTTCCTCTGTGTTTATCCAGTGGGGTATGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCGC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGGGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGa                                                                                                             <  1:513185/150‑1 (MQ=255)                                    tctGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGAtt                                                                                                        >  1:722069/1‑150 (MQ=255)                                    tctGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGAtt                                                                                                        <  1:806472/150‑1 (MQ=255)                                      tgtgTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTAc                                                                                                      >  1:895889/1‑150 (MQ=255)                                         gtTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGGGGTCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCa                                                                                                   <  1:336370/150‑1 (MQ=255)                                            tATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCt                                                                                                <  2:307503/150‑1 (MQ=255)                                                 aGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGaaa                                                                                                                                         >  2:190924/1‑104 (MQ=255)                                                 aGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGaaa                                                                                                                                         <  1:190924/104‑1 (MQ=255)                                                 aGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAg                                                                                           <  1:251049/150‑1 (MQ=255)                                                   tGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGc                                                                                         >  2:719451/1‑150 (MQ=255)                                                       gTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCAcc                                                                                     >  1:438826/1‑150 (MQ=255)                                                             gTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCa                                                                               <  2:895889/150‑1 (MQ=255)                                                                tGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGGGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCAcgc                                                                            <  1:603999/150‑1 (MQ=255)                                                                    ccTTCGCGGGCATGCCCGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCtata                                                                                                                     <  2:453735/105‑1 (MQ=255)                                                                    ccTTCGCGGGCATGCCCGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCtata                                                                                                                     >  1:453735/1‑105 (MQ=255)                                                                     cTTCGCGGGCATGCCCGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGAtt                                                                                                        >  1:856748/1‑117 (MQ=255)                                                                     cTTCGCGGGCATGCCCGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGAtt                                                                                                        <  2:856748/117‑1 (MQ=255)                                                                      ttCGCGGGCATGCCCGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAg                                                                      >  2:348059/1‑150 (MQ=255)                                                                         gcgGGCATGCCCGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAgcgc                                                                   <  1:1087827/150‑1 (MQ=255)                                                                             gCATGCCCGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCTGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCa                                                               <  2:1130849/150‑1 (MQ=255)                                                                               aTGCCCGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGc                                                             >  2:161156/1‑150 (MQ=255)                                                                                 gCCCGCTCCCACAGGAACACCACAACCTTTGAAACC‑TGTGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCg                                                           >  1:700676/1‑150 (MQ=18)                                                                                  cccGCTCCCCCAGCTACAGCAC‑AGGTGTGAAAGGGTGGGGGGTTCCTGTGGGCGCGGGCGTGCCTGTTACAGTGCCCGAATGGCTTCTATAGTGACCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGc                                                          <  1:811223/150‑1 (MQ=255)                                                                                   ccGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGtgcccgcgaaggcccaaacccctaccccactgaataaacacagaggaacggccatggtcctgcgttcggaaatcctg                                                                       >  2:130519‑M2/1‑59 (MQ=255)                                                                                   ccGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGtgcccgcgaaggcccaaacccctaccccactgaataaacacagaggaacggccatggtcctgcgttcggaaatcctg                                                                       <  1:130519‑M2/136‑78 (MQ=255)                                                                                   ccGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCt                                                         >  2:612372/1‑150 (MQ=255)                                                                                     gCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGtgcccgcgaaggcccaaacccctaccccactgaataaacacagaggaacggccatggtcctgcgttcggaaatcctggtgaacaaaaacgtca                                                       <  2:883383‑M2/150‑94 (MQ=255)                                                                                      cTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGCTGCCGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCgg                                                      >  1:319851/1‑150 (MQ=255)                                                                                         ccACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGATGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCa                                                   >  1:801707/1‑150 (MQ=255)                                                                                         ccACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCa                                                   >  1:1009453/1‑150 (MQ=255)                                                                                         ccACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACACGGATAGCGCTTCAGCCGCTCGGCCa                                                   >  2:69635/1‑150 (MQ=255)                                                                                           acaGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCGTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGt                                                 >  2:472056/1‑150 (MQ=255)                                                                                           acaGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGtgcccgcgaaggcccaaacccctaccccactgaataaacacagaggaacggccatggtcctgcgttcggaaatcctggtgaacaaaaacgtcatgccca                                                 <  1:174983‑M2/150‑100 (MQ=255)                                                                                               gTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCg                                                                                    >  1:664181/1‑111 (MQ=255)                                                                                               gTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCg                                                                                    <  2:664181/111‑1 (MQ=255)                                                                                               gTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCAtgcccgcgaaggcgcaaacccctaccccactgaataaacacagaggaacggccatggtcctgcgttcggaaatcctggtgaacaaaaacgtcatgcccactgc                                             <  2:318616‑M2/150‑104 (MQ=255)                                                                                                    gCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTCGCGCCCg                                        >  1:555100/1‑150 (MQ=255)                                                                                                      ac‑aGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTCGCGCCCggg                                      >  2:892574/1‑150 (MQ=255)                                                                                                              tCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTCGCGCCCGGGAATCGGc                               <  1:348059/150‑1 (MQ=255)                                                                                                                 aaGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTCGCGCCCGGGAATCGGCCgg                            >  1:520418/1‑150 (MQ=255)                                                                                                                    gTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCtt                                                                 >  1:497044/1‑110 (MQ=255)                                                                                                                    gTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCtt                                                                 <  2:497044/110‑1 (MQ=255)                                                                                                                    gTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTCGCGCCCGGGAATCGGCCGGTCg                         >  1:1141626/1‑150 (MQ=255)                                                                                                                    gTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTCGCGCCCGGGAATCGGCCGGTCg                         >  1:823905/1‑150 (MQ=255)                                                                                                                       gtggtgTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTCGCGCCCGGGAATCGGCCGGTCGAAc                      <  2:1083648/150‑1 (MQ=255)                                                                                                                        tggtgTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACTGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTCGCGCCCGGGAATCGGCCGGTCGAACa                     <  1:916236/150‑1 (MQ=255)                                                                                                                             ttCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTCGCGCCCGGGAATCGGCCGGTCGAACAGGTa                 <  2:537136/149‑1 (MQ=255)                                                                                                                             ttCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTCGCGCCCGGGAATCGGCCGGTCGAACAGGTa                 >  1:537136/1‑149 (MQ=255)                                                                                                                                 tgtgGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCg                                                                                    >  1:1043191/1‑78 (MQ=255)                                                                                                                                 tgtgGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCg                                                                                    <  2:1043191/78‑1 (MQ=255)                                                                                                                                   tgGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTCGCGCCCGGGAATCGGCCGGTCGAACAGGTAGCCCTgg          <  2:555100/150‑1 (MQ=255)                                                                                                                                   tgGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTCGCGCCCGGGAATCGGCCGGTCGAACAGGTAGCCCTgg          <  2:823905/150‑1 (MQ=255)                                                                                                                                     ggAGCGGGCGtgcccgcgaaggcccaaacccctaccccactgaataaacacagaggaacggccatggtcctgcgttcggaaatcctggtgaacaaaaacgtcatgcccactgcggaacaggccctgcctggccgcgacacgccaatgagc        >  1:883383‑M2/1‑10 (MQ=255)                                                                                                                                     ggAGCGGGCGtgcccgcgaaagggcccaaacccctaccccactgaataaacacagaggaacggccatggtcctgcgttcggaaatcctggtgaacaaaaacgtcatgcccactgcggaacaggccctgcctggccgcgacacgccaatga        <  2:472228‑M2/150‑141 (MQ=255)                                                                                                                                          gggCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTCGCGCCCGGGAATCGGCCGGTCGAACAGGTAGCCCTGGCCCACGt   <  2:520418/150‑1 (MQ=255)                                                                                                                                           ggCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTCGCGCCCGGGAATCGGCCGGTCGAACAGGTAGCCCTGGCCCACGTc  >  1:463603/1‑150 (MQ=255)                                                                                                                                              |                                                                                                                                                   ACCAGGATTTCCGAACGCAGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCAC‑AGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTCGCGCCCGGGAATCGGCCGGTCGAACAGGTAGCCCTGGCCCACGTC  >  NC_002947/403175‑403461

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.