New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1064979 | 67 (1.480) | 3 (0.070) | 3/230 | NT | 5.2% | intergenic (+33/+80) | PP_0922/PP_0923 | hypothetical protein/acyltransferase |
? | NC_002947 | = 1065023 | 48 (1.150) | intergenic (+77/+36) | PP_0922/PP_0923 | hypothetical protein/acyltransferase |
CTGGCGGATTTTCGCGAGTTCTACCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACGTCTTCAACCCCGAACAGCGCCAGGTGAATCGCCTGTTGCGCCTGCAACGCCAGCACCGCACGTTCCTTGCC > NC_002947/1064875‑1065169 | cTGGCGGATTTTCGCGAGTTCTACCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCa > 2:163169‑M2/1‑149 (MQ=255) gCGGATTTTCGCGAGTTCTACCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCaccc > 1:917496‑M2/1‑146 (MQ=255) gCGGATTTTCGCGAGTTCTACCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCAATGCAGTTCGTTTTGGAGCGGGTTCaccc < 2:1182761‑M2/150‑5 (MQ=255) ttCGCGAGTTCTACCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAg < 2:910600/150‑1 (MQ=255) gcgAGTTCTACCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTCGCCTCTTCGCTGGTAAACCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGc > 1:143129/1‑150 (MQ=255) cgAGTTCTACCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGcc > 1:915818/1‑150 (MQ=255) gTTCTACCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGa > 1:715702/1‑150 (MQ=255) cTACCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACa > 2:173623/1‑150 (MQ=255) tACCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGGGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCAATGCGCTCGGTGGAGGAACGGGTTCACCCGCGAAGGGGCAAGAACAg > 2:545451/1‑150 (MQ=39) gCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGt > 2:1119145/1‑150 (MQ=255) gCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCa < 2:751365/150‑1 (MQ=255) cTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAg < 2:715702/150‑1 (MQ=255) cGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCa < 1:1119145/150‑1 (MQ=255) gTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAg < 1:173623/150‑1 (MQ=255) gcggTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGAGTAAACCCGCTCCTACGGCAAATGCGCTCGGGGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCACGGCAGGCATTCAGGCAGccc > 1:632853/1‑150 (MQ=39) gggCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCt < 2:56845/150‑1 (MQ=255) ggATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAg > 1:307251/1‑105 (MQ=255) ggATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAg < 2:307251/105‑1 (MQ=255) cTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTgg > 2:1038893/1‑150 (MQ=255) tGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCATGTCGGGTAAACCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGgc > 1:886504/1‑150 (MQ=255) aCAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCCATGCGCCCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGgcgc > 2:130418/1‑150 (MQ=255) aCAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGt < 2:713664/145‑1 (MQ=255) aCAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGt > 1:713664/1‑145 (MQ=255) gTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCAt < 1:1182761/150‑1 (MQ=255) gtgtgtGGGTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCCGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACg > 2:766400/1‑150 (MQ=255) gtgtgtGGGTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACg > 1:1157605/1‑150 (MQ=255) tgtgGGTGATACTGGCCTCTTCGCGTGTAAACCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACGTCt < 1:422794/150‑1 (MQ=255) tgtgGGTGATACTGGCCTCTTCGCGGGTAAACCAGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTgga < 2:666627/135‑2 (MQ=255) tgtgGGTGATACTGGCCTCTTCGCGGGTAAACCAGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTgga > 1:666627/1‑134 (MQ=255) ggTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCac > 2:1187566‑M2/1‑68 (MQ=255) ggTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCac < 1:1187566‑M2/70‑3 (MQ=255) gTGATACTGGCCTCTTCGCGGGTAAACTCCCTCCTACGGGCAATGCGCGCGGTGTAGGCGCGGGTTCACCCGCGAAAGGGCTAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACGTCTTCAAc < 1:1183925/150‑1 (MQ=38) gTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACGTCTTCAAc < 2:378144/150‑1 (MQ=255) cTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACGTCTTCAACCCCGaa < 2:628089/150‑1 (MQ=255) gCCTCTTCGCGGGTAAACCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACGTCTTCAACCCCGaa > 2:301983/1‑147 (MQ=255) gCCTCTTCGCGGGTAAACCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACGTCTTCAACCCCGaa < 1:301983/147‑1 (MQ=255) gCCTCTTCGCGGGTAAACCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACGTCTTCAACCCCGAACAg > 2:958845/1‑150 (MQ=255) ccTCTTCGCGGGTAAACCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACGTCTTCAACCCCGAACAgc < 1:392490/150‑1 (MQ=255) ctctTCGCGGGTAAACCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACGTCTTCAACCCCAACCAggc > 2:973995/1‑148 (MQ=255) tctTCGCGGGTAAACCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCacccgcgaagaggccagtatcacccacacacctctaactgtcagacatccgccctaccgccgcaaacgcctgcagctgcgggtagaactcgcgaa < 1:529819‑M2/150‑96 (MQ=255) gcgGGTAAACCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACGTCTTCAACCCCGAACAGCGCCAGGt > 1:550751/1‑150 (MQ=255) ggTAAACCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACGTCTTCAACCCCGAACAGCGCCAGGTGaa > 1:543655/1‑150 (MQ=255) gTAAACCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCacccgcgaagaggccagtatcacccacacacctctaactgtca < 2:196134‑M2/89‑44 (MQ=255) gTAAACCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCacccgcgaagaggccagtatcacccacacacctctaactgtca > 1:196134‑M2/1‑46 (MQ=255) gTAAACCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGgcgc > 2:905113/1‑111 (MQ=255) gTAAACCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGgcgc < 1:905113/111‑1 (MQ=255) aCCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACGTCTTCAACCCCGAACAGCGCCAGGTGAATCGcc < 1:973995/150‑1 (MQ=255) cccGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACGTCTTCAACCCCGAACAGCGCCAGGTGAATCGCCt < 1:1176328/150‑1 (MQ=255) cccGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGAGACGTGGGCAGAACAAGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGACGCCATCTCCACGTCTTCAACCCCGACCAGCGCCAGGTGAATCGCCt > 1:633766/1‑150 (MQ=255) ccGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACGTCTTCAACCCCGAACCGCGCCAGGTGAATCGCCTg > 1:111469/1‑150 (MQ=255) gCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACGTCTTCAACCCCGAACAGCGCCAGGTGAATCGCCTGtt > 2:1144473/1‑150 (MQ=255) cTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACGTCTTCAACCCCGAACAGCGCCAGGTGAATCGCCTGTTgcgc < 1:834429/150‑1 (MQ=255) tACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACGTCt < 1:857503/111‑1 (MQ=255) tACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACGTCt > 2:857503/1‑111 (MQ=255) cGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTgg < 1:1146664/93‑1 (MQ=255) cGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTgg > 2:1146664/1‑93 (MQ=255) aaTGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACGTCTTCAACCCCGAACAGCGCCAGGTGAATCGCCTGTTGCGCCTGCAACg > 2:1104159/1‑150 (MQ=255) ggTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCa > 2:547246/1‑90 (MQ=255) ggTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCa < 1:547246/90‑1 (MQ=255) cGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACGTCTTCAACCCCGAACAGCGCCAGGTGAATCGCCTGTTGCGCCTGCAACGCCAGCACCGCACGTTCCtt < 1:1104159/150‑1 (MQ=255) gTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACGTCTTCAACCCCGAACAGCGCCAGGTGAATCGCCTGTTGCGCCTGCAACGCCAGCACCGCACGTTCCTTGcc > 1:848641/1‑150 (MQ=255) gTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACGACTTCAACCCCGAACAGCGCCAGGTGAATCGCCTGTTGCGCCTGCAACGCCAGCACCGCACGTTCCTTGcc > 1:746205/1‑150 (MQ=255) | CTGGCGGATTTTCGCGAGTTCTACCCGCAGCTGCAGGCGTTTGCGGCGGTAGGGCGGATGTCTGACAGTTAGAGGTGTGTGGGTGATACTGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCAATGCGCTCGGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACGTCTTCAACCCCGAACAGCGCCAGGTGAATCGCCTGTTGCGCCTGCAACGCCAGCACCGCACGTTCCTTGCC > NC_002947/1064875‑1065169 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |