New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1370042	29 (0.640)	2 (0.050)	3/238	NT	6.5%	coding (832/1719 nt)	PP_1195	hypothetical protein
	?	NC_002947	= 1370064	30 (0.690)					coding (854/1719 nt)	PP_1195	hypothetical protein

GTGGCGACCCGTATCGAACGGGCACCGGGGTTGAGGGAGGCCAGCGCCATCGGCGCGGTTGATCGCACTGGCAGCCTTCAAGGGTTGAAGTTGGGTACCCGTGTGGCGCCTGCTCGTGAGGTGCTGGTGCGCGG‑CCAGTGGACCGGGCGCCAGCTTGAAGTGGCACAAACCCGTCCAGACCCGAGCCTGCCTTTTGCTGGTCGTGTCCAGCAGGCGGTGGTTGAAGGGCTGGTACAGCGTACACAAGCTCGGCAGTTGGTGGTTGCAGGTCTCAATGTGACATTGGGGCAG  >  NC_002947/1369916‑1370206                                                                                                                                                      |                                                                                                                                               gTGGCGACCCGTATCGAACGGGCACCGGGGTTGAGGGAGGCCAGCGCCATCGGCGCGGTTGATCGCACTGGCAGCCTTCAAGGGTTGAAGTTGGGTACCCGTGTGGCGCCTGCTCGTGAGGTGCTGGTGCGCGG‑CCAGTGGACCGGGCGc                                                                                                                                               <  2:524798‑M2/150‑2 (MQ=255)          cGTATCGAACGGGCACCGGTGTTGAGGGAGGCCAGCGCCATCGGCGCGGTTGATCGCACTGGCAGCCTTCAAGGGTTGAAGTTGGGTACCCGTGTGGCGCCTGCTCGTGAGGTGCTGGCGCCCGGTCCACTGG‑CCGCGCAccagcacctc                                                                                                                                      >  2:78300‑M2/1‑140 (MQ=255)           gTATCGAACGGGCACCGGGGTTGAGGGAGGCCAGTGCCATCGGCGCGGTTGATCGCACTGGCAGCCTTCAAGGGTTAAAGTTGGGTACCCGTGTGGCGCCTGCTCGTGAGGTGCTGGTGCGCGG‑CCAGTAGATCGGGCGCCAGCTTGAAg                                                                                                                                     >  2:528919/1‑150 (MQ=255)            tATCGAACGGGCACCGGGGTTGAGGGAGGCCAGCGTCATCGGCGCGGTTGATCGCACTGGCAGCCTTCAAGGGTTGAAGTTGGGTACCCGTGTGGCGCCTGCTCGTGAGGTGCTGGTGCGCGG‑CCAGTGGACCGGGCGCCAGCTTGAAGt                                                                                                                                    <  2:580200/150‑1 (MQ=255)              tCGAACGGGCACCGGGGTTGAGGGAGGCCAGCGCCATCGGCGCGGTTGATCGCACTGGCAGCCTTCAAGGGTTGAAGTTGGGTACCCGTGTGGCGCCTGCTCGTGAGGTGCTGGTGCGCGG‑CCAGTGGACCGGGCGCCAGCTTGAAGTgg                                                                                                                                  >  1:702779/1‑150 (MQ=255)                         ccGGGGTTGAGGGAGGCCAGCGCCATCGGCGCGGTTGATCGCACTGGCAGCCTTCAAGGGTTGAAGTTGGGTACCCGTGTGGCGCCTGCTCGTGAGGTGCTGGTGCGCGG‑CCAGTGGACCGGGCGCCAGCTTGAAGTGGCACAAACCCGt                                                                                                                       >  2:528305/1‑150 (MQ=255)                                   gggaggCCAGCGCCATCGGCGCGGTTGATCGCACTGGCAGCCTTCAAGGGTTGAAGTTGGGTACCCGTGTGGCGCCTGCTCGTGAGGTGCTGGTGCGCGG‑CCAGTGGACCGGGCGCCAGCTTGAAGTGGCACAAACCCGTCCAGACCCGa                                                                                                             >  1:1095377/1‑150 (MQ=255)                                    ggaggCCAGCGCCATCGGCGCGGTTGATCGCACTGGCAGCCTTCAAGGGTTGAAGTTGGGTACCCGTGTGGCGCCTGCTCGTGAGGTGCTGGTGCGCGG‑CCAGTGGACCGGGCGCCAGCTTGAAGTGGCACAAACCCGTCCAGACCCGAg                                                                                                            >  2:757832/1‑150 (MQ=255)                                                       gcgGTTGATCGCACTGGCAGCCTTCAAGGGTTGAAGTTGGGTACCCGTGTGGCGCCTGCTCGTGAGGTGCTGGTGCGCGG‑CCAGTGGACCGGGCGCCAGCTTGAAGTGGCACAAACCCGTCCAGACCCGAGCCTGCCTTTTGCTGGTCgt                                                                                         >  2:188753/1‑150 (MQ=255)                                                             gATCGCACTGGCAGCCTTCAAGGGTTGAAGTTGGGTACCCGTGTGGCGCCTGCTCGTGAGGTGCTGGTGCGCGG‑CCAGTGGACCGGGCGCCAGCTTGAAGTGGCACAAACCCGTCCAGACCCGAGCCTGCCTTTTGCTGGTCGTGTCcag                                                                                   >  2:164007/1‑150 (MQ=255)                                                             gATCGCACTGGCAGCCTTCAAGGGTTGAAGTTGGGTACCCGTGTGGCGCCTGCTCGTGAGGTGCTGGTGCGCGG‑CCAGTGGACCGGGCGCCAGCTTGAAGTGGCACAAACCCGTCCAGACCCGAGCCTGCCTTTTGCTGGTCGTGTCcag                                                                                   <  2:1095377/150‑1 (MQ=255)                                                               tCGCACTGGCAGCCTTCAAGGGTTGAAGTTGGGTACCCGTGTGGCGCCTGCTCGTGAGGTGCTGGTGCGCGG‑CCAGTGGACCGGGCGCCAGCTTGAAGTGGCACAAACCCGTCCAGACCCGAGCCTGCCTTTTGCTGGTCGTGTCcagca                                                                                 >  1:1134631/1‑150 (MQ=255)                                                                  cACTGGCAGCCTTCAAGGGTTGAAGTTGGGTACCCGTGTGGCGCCTGCTCGTGAGGTGCTGGTGCGCGG‑CCAGTGGACCGGGCGCCAGCTTGAAGTGGCACAAACCCGTCCAGACCCGAGCCTGCCTTTTGCTGGTCGTGTCCAGCAGGc                                                                              <  2:1160333/150‑1 (MQ=255)                                                                      ggCAGCCTTCAAGGGTTGAAGTTGGGTACCCGTGTGGCGCCTGCTCGGGAGGTGCTGGTGCGCGG‑CCAGTGGACCGGGTGCCAGCTTGAAGTGGCACAAACCCGTCCAGACACGAGCCTGCCTTTTGCTGGTCGTGTCCAGCAGGCggtg                                                                          <  1:528919/150‑1 (MQ=255)                                                                       gCAGCCTTCAAGGGTTGAAGTTGGGTACCCGTGTGGCGCCTGCTCGTGAGGTGCTGGTGCGCGG‑CCAGTGGACCGGGCGCCAGCTTGAAGTGGCACAAACCCGTCCAGACCCGAGCCTGCCTTTTGCTGGTCGTGTCCAGCAGGCggtgg                                                                         <  2:158457/150‑1 (MQ=255)                                                                         aGCCTTCAAGGGTTGAAGTTGGGTACCCGTGTGGCGCCTGCTCGTGAGGTGCTGGTGCGCGG‑CCAGTGGACCGGGCGCCAGCTTGAAGTGGCACAAACCCGTCCAGACCCGAGCCTGCCTTTTGCTGGTCGTGTCCAGCAGGCGGTGGtt                                                                       <  1:164007/150‑1 (MQ=255)                                                                            cTTCAAGGGTTGAAGTTGGGTACCCGTGTGGCGCCTGCTCGTGAGGTGCTGGTGCGCGG‑CCAGTGGACCGGGCGCCAGCTTGAAGTGGCACAAACCCGTCCAGACCCGAGCCTGCCTTTTGCTGGTCGTGTCCAGCAGGCGGTGGTTGaa                                                                    <  1:765059/150‑1 (MQ=255)                                                                                  gggTTGAAGTTGGGTACCCGTGTGGCGCCTGCTCGTGAGGTGCTGGTGCGCGG‑CCAGTGGACCGGGCGCCAGCTTGAAGTGGCACAAACCCGTCCAGACCCGAGCCTGCCTTTTGCTGGTCGTGTCCAGCAGGCGGTGGTTGAAGGGCTg                                                              <  1:524798/150‑1 (MQ=255)                                                                                     ttGAAGTTGGGTACCCGTGTGGCGCCTGCTCGTGAGGTGCTGGTGCGCGG‑CCAGTGGACCGGGCGCCAGCTTGAAGTGGCACAAACCCGTCCAGACCCGAGCCTGCCTTTTGCTGGTCGTGTCCAGCAGGCGGTGGTTGAAGGGCTGGTa                                                           >  1:398984/1‑150 (MQ=255)                                                                                         aGTTGGGTACCCGTGTGGCGCCTGCTCGTGAGGTGCTGGTGCGCGG‑CCAGTGGACCGGGCGCCAGCTTGAAGTGGCACAAACCCGTCCAGACCCGAGCCTGCCTTTTGCTGGTCGTGTCCAGCAGGCGGTGGTTGAAGGGCTGGTACAGc                                                       <  2:40030/150‑1 (MQ=255)                                                                                                     gtgtGGCGCCTGCTCGTGAGGTGCTGGTGCGCGG‑CCAGTGGACCGGGCGCCAGCTTGAAGTGGCACAAACCCGTCCAGACCCGAGCCTGCCTTTTGCTGGTCGTGTCCAGCAGGCGGTGGTTGAAGGGCTGGTACAGCGTACACAAGCTc                                           <  2:1193437/150‑1 (MQ=255)                                                                                                     gtgtGGCGCCTGCTCGTGAGGTGCTGGTGCGCGG‑CCAGTGGACCGGGCGCCAGCTTGAAGTGGCACAAACCCGTCCAGACCCGAGCCTGCCTTTTGCTGGTCGTGTCCAGCAGGCGGTGGTTGAAGGGCTGGTACAGCGTACACAAGCTc                                           <  2:702779/150‑1 (MQ=255)                                                                                                         ggCGCCTGCTCGTGAGGTGCTGGTGCGCGG‑CCAGTGGACCGGGCGCCAGCTTGAAGTGGCACAAACCCGTCCAGACCCGAGCCTGCCTTTTGCTGGTCGTGTCCAGCAGGCGGTGGTTGAAGGGCTGGTACAGCGTACACAAGCTCGGCa                                       <  1:757832/150‑1 (MQ=255)                                                                                                          gcgcCTGCTCGTGAGGTGCTGGTGCGCGG‑CCAGTGGACCGGGCGCCAGCTTGAAGTGGCACAAACCCGTCCAGACCCGAGCCTGCCTTTTGCTGGTCGTGTGCAGCAGGCGGTGGTTGAAGGGCTGGTACAGCGTACACAAGCTCGGCAg                                      >  1:73474/1‑150 (MQ=255)                                                                                                                         gTGCTGGTGCGCGG‑CCAGTGGACCGGGCGCCAGCTTGAAGTGGCACAAACCCGTCCAGACCCGAGCCTGCCTTTTGCTGGTCGTGTCCAGCAGGCGGTGGTTGAAGGGCTGGTACAGCGTACACAAGCTCGGCAGTTGGTGGTTGCAGGt                       >  2:1141814/1‑150 (MQ=255)                                                                                                                            cTGGTGCGCGG‑CCAGTGGACCGGGCGccagcacctcacgagcaggcgccacacgggtacccaacttcaacccttgaaggctgccagtgcgatcaaccgcgcc                                                                    >  1:579366‑M2/1‑26 (MQ=255)                                                                                                                            cTGGTGCGCGG‑CCAGTGGACCGGGCGccagcacctcacgagcaggcgccacacgggtacccaacttcaacccttgaaggctgccagtgcgatcaaccgcgcc                                                                    <  2:579366‑M2/102‑77 (MQ=255)                                                                                                                              ggTGCGCGG‑CCAGTGGACCGGGCGCCAGCTTGAAGTGGCACAAACCCGTCCAGACCCGAGCCTGCCTTTTGCTGGTCGTGTCCAGCAGGCGGTGGTTGAAGGGCTGGTACAGCGTACACAAGCTCGGCAGTTGGTGGTTGCAGGTCTCaa                  <  1:188753/150‑1 (MQ=255)                                                                                                                                        ccAGTGGACCGGGCGCCAGCTTGAAGTGGCACAAACCCGTCCAGACCCGAGCCTGCCTTTTGCTGGTCGTGTCCAGCAGGCGGTGGTTGAAGGGCTGGTACAGCGTACACAAGCTCGGCAGTTGGTGGTTGCAGGTCTCAATGTGACAtt         <  1:528305/150‑1 (MQ=255)                                                                                                                                           gTGGACCGGGCGCCAGCTTGAAGTGGCACAAACCCGTCCAGACCCGAGCCTGCCTTTTGCTGGTCGTGTCCATCAGGCAGCACTTGTAGGGGTGGTACAGCGTACACAAGCTCGGCAGTTGGTGGTTGCAGGTCTCAATGTGACATTggg      >  2:37447/1‑150 (MQ=255)                                                                                                                                           gTGGACCGGGCGCCAGCTTGAAGTGGCACAAACCCGTCCAGACCCGAGCCTGCCTTTTGCTGGTCGTGTCCAGCAGGCGGTGGTTGAAGGGCTGGTACAGCGTACACAAGCTCGGCAGTTGGTGGTTGCAGGTCTCAATGTGACATTggg      >  1:582533/1‑150 (MQ=255)                                                                                                                                              gACCGGGCGCCAGCTTGAAGTGGCACAAACCCGTCCAGACCCGAGCCTGCCTTTTGCTGGTCGTGTCCAGCAGGCGGTGGTTGAAGGGCTGGTACAGCGTACACAAGCTCGGCAGtt                                    <  2:764133/117‑1 (MQ=255)                                                                                                                                              gACCGGGCGCCAGCTTGAAGTGGCACAAACCCGTCCAGACCCGAGCCTGCCTTTTGCTGGTCGTGTCCAGCAGGCGGTGGTTGAAGGGCTGGTACAGCGTACACAAGCTCGGCAGtt                                    >  1:764133/1‑117 (MQ=255)                                                                                                                                               aCCGGGCGCCAGCTTGAAGTGGCACAAACCCGTCCAGACCCGAGCCTGCCTTTTGCTGGTCGTGTCCAGCAGGCGGTGGTTGAAGGGCTGGTACAGCGTACACAAGCTCGGCAGTTGGTGGTTGCAGGTCTCAATGTGACATTGgggcag  <  2:73474/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                               GTGGCGACCCGTATCGAACGGGCACCGGGGTTGAGGGAGGCCAGCGCCATCGGCGCGGTTGATCGCACTGGCAGCCTTCAAGGGTTGAAGTTGGGTACCCGTGTGGCGCCTGCTCGTGAGGTGCTGGTGCGCGG‑CCAGTGGACCGGGCGCCAGCTTGAAGTGGCACAAACCCGTCCAGACCCGAGCCTGCCTTTTGCTGGTCGTGTCCAGCAGGCGGTGGTTGAAGGGCTGGTACAGCGTACACAAGCTCGGCAGTTGGTGGTTGCAGGTCTCAATGTGACATTGGGGCAG  >  NC_002947/1369916‑1370206

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.