New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3501501	29 (0.640)	22 (0.500)	22/240	NT	36.6%	coding (192/192 nt)	PP_5567	hypothetical protein
	?	NC_002947	= 5062465	48 (1.100)					coding (1094/1098 nt)	PP_4459	transposase

CTCCATTACCACGTTTTTAGCGCTGCACAACGCCCAACCCTCTCGGTACGTCTGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTACCCAGACACTATGAGCAATGTCTCTTAGGAATAGATTGAATTACTTCCCCAACCCCTTTGCTAGCAGCGCGAAAGCTTTTGATTAGTAGAAG  >  NC_002947/5062316‑5062611                                                                                                                                                      |                                                                                                                                                   cTCCATTACCACGTTTTTAGCGCTGCACAACGCCCAACCCTCTCGGTACGTCTGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGaca                                                                                                                                                    >  2:338707/1‑150 (MQ=255)     aTTACCACGTTTTTAGCGCTGCACAACGCCCAACCCTCTCGGTACGTCTGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACActag                                                                                                                                                <  1:530302‑M2/150‑5 (MQ=255)      ttACCACGTTTTTAGCGCTGCACAACGCCCAACCCTCTCGGTACGTATGGGGTGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACActagc                                                                                                                                               >  1:565224‑M2/1‑145 (MQ=255)          tggggttttagcgcTGCACAACGCCCAACCCTCTCGGTACGTCTGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATACAGGGTGCCCGAGAAGCAATAGCACAAGAGCATAAAGAGCACGTTGTAGCTGAGACAGGACActagcccat                                                                                                                                           <  1:645209‑M2/145‑10 (MQ=255)           aCGCTTTTAGCGCTGCACAACGCCCAACCCTCTCGGTACGTCTGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGGGAGAATAAAGAAAAAGTTGTATCTGAGACAGGACAATAGGGTGTa                                                                                                                                          >  2:516792/1‑150 (MQ=255)            cGTTTTTAGCGCTGCACAACGCCCAACCCTCTCGGTACGTCTGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACActagcccatca                                                                                                                                         >  1:488557‑M2/1‑139 (MQ=255)              tttttAGCGCTGCACAACGCCCAACCCTCTCGGTACGTCTGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACActagcccatcatg                                                                                                                                       <  1:1111930‑M2/150‑14 (MQ=255)                     cgcTGCACAACGCCCAACCCTCTCGGTACGTCTGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGa                                                                                                                                <  2:909330/150‑1 (MQ=255)                        tGCACAACGCCCAACCCTCTCGGTACGTCTGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAg                                                                                                                             >  1:400314/1‑150 (MQ=255)                         gCACAACGCCCAACCCTCTCGGTACGTCTGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAgt                                                                                                                            >  1:662381/1‑150 (MQ=255)                            caACGCCCAACCCTCTCGGTACGTCTGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACActagcccatcatgagcggcacgccgga                                                                                                                         >  1:1082687‑M2/1‑123 (MQ=255)                              aCGCCCAACCCTCTCGGTACGTCTGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGtcgtcg                                                                                                                       <  1:911135/150‑1 (MQ=255)                                gCCCAACCCTCTCGGTACGTCTGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCTGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTNTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGt                                                                                                                     <  1:516792/150‑1 (MQ=255)                                 cccAACCCTCTCGGTACGTCTGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTg                                                                                                                    >  2:818873/1‑150 (MQ=255)                                  ccAACCCTCTCGGTACGTCTGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACActagcccatcatgagcggcacgccggagtcttc                                                                                                                   <  1:786041‑M2/150‑34 (MQ=255)                                    aaCCCTCTCGGTACGTCTGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAgg                                                                                                                 <  2:680627/150‑1 (MQ=255)                                       ccTCTCGGTACGTCTGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGa                                                                                                              <  1:572118/150‑1 (MQ=255)                                        ctctCGGTACGTCTGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAg                                                                                                             >  1:614917/1‑150 (MQ=255)                                         tctcGGTACGTCTGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGc                                                                                                            >  2:839517/1‑150 (MQ=255)                                                 cGTCTGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAg                                                                                                    <  1:790434/150‑1 (MQ=255)                                                  gTCTGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAgg                                                                                                   <  1:839517/150‑1 (MQ=255)                                                     tGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAg                                                                                                                  <  1:423903/132‑1 (MQ=255)                                                     tGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAg                                                                                                                  >  2:423903/1‑132 (MQ=255)                                                       gAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCt                                                                                               >  2:815631/1‑149 (MQ=255)                                                       gAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCt                                                                                               <  1:815631/149‑1 (MQ=255)                                                         gcgcGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTAcc                                                                                            <  2:530302/150‑1 (MQ=255)                                                               aaGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTACCCAGaca                                                                                      >  2:797612/1‑150 (MQ=255)                                                                 ggTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCa                                                                                                                                  >  2:127605/1‑104 (MQ=255)                                                                 ggTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCa                                                                                                                                  <  1:127605/104‑1 (MQ=255)                                                                  gTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACActagcccatcatgagcgggaggccggagtcttcgcagaccagcagcagttcgtagttgaacgccc                                                                                   <  1:734728‑M2/150‑66 (MQ=255)                                                                   tGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTAc                                                                                             >  1:907771/1‑139 (MQ=255)                                                                   tGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTAc                                                                                             <  2:907771/139‑1 (MQ=255)                                                                    gAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTACCCAGACACTATg                                                                                 >  2:681582/1‑150 (MQ=255)                                                                     atctcATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGCCGTTGCTGAGGCGAGCCTGGGGAGGCCCTACCCAGACACTATGa                                                                                <  2:835072/146‑1 (MQ=255)                                                                        aCATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACActagcccatcatgagcggcacgccggagtcttcgcagaccagcagcagttcgtagttgaacgcccacgaca                                                                             <  1:299569‑M2/150‑72 (MQ=255)                                                                          aTCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGt                                                                                                                     >  1:299590/1‑108 (MQ=255)                                                                          aTCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGt                                                                                                                     <  2:299590/108‑1 (MQ=255)                                                                           tCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGTGAGCCTGGGGAGGCCCTACCCAGACACTATGAGCAATg                                                                          <  1:818873/150‑1 (MQ=255)                                                                           tCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTACCCAGACACTATGAGCAATg                                                                          >  2:261882/1‑150 (MQ=255)                                                                             ttGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAgg                                                                                                                                               >  1:231849/1‑79 (MQ=255)                                                                             ttGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAgg                                                                                                                                               <  2:231849/79‑1 (MQ=255)                                                                             ttGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTACCCAGACACTATGAGCAATGtc                                                                        >  2:825012/1‑150 (MQ=255)                                                                             ttGAGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACActagcccatcatgagcggcacgccggagtcttcgcagaccagcagcagttcgtagttgaacgcccacgacagggct                                                                        <  2:44789‑M2/150‑77 (MQ=255)                                                                                      aTCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACActagcccatcatgagcggcacgccggagtcttcgcagaccagcagcagttcg                                                                                                <  2:525669‑M2/117‑53 (MQ=255)                                                                                      aTCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTAGCTGAGACAGGACActagcccatcatgagcggcacgccggagtcttcgcagaccagcagcagttcg                                                                                                >  1:525669‑M2/1‑65 (MQ=255)                                                                                        ccAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTACCCAGACACTATGAGCACTGTCTCTTAGGAATa                                                             >  2:288211/1‑150 (MQ=255)                                                                                               gCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTACCCAGACACTATGAGCAATGTCTCTTAGGAATAGATTGaa                                                      <  1:825012/150‑1 (MQ=255)                                                                                                cccGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAgtc                                                                                                                           >  1:623127/1‑80 (MQ=255)                                                                                                cccGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAgtc                                                                                                                           <  2:623127/80‑1 (MQ=255)                                                                                                  cGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTACCCAGACACTATGAGCAATGTCTCTTAGGAATAGATTGAATTa                                                   >  1:564171/1‑150 (MQ=255)                                                                                                       ggCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTACCCAGACACTATGAGCAATGTCTCTTAGGAATAGATTGAATTACTTcc                                              <  1:797612/150‑1 (MQ=255)                                                                                                        gCAATTGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTACCCAGACACTATGAGCAATGTCTCTTAGGAATAGATTGAATTACTTccc                                             >  2:496407/1‑150 (MQ=255)                                                                                                        gCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACActagcccatcatgagcggcacgccggagtcttcgcagaccagcagcagttcgtagttgaacgcccacgacagggcttcggtgcccttgaa                                                          <  1:1179645‑M2/137‑91 (MQ=255)                                                                                                        gCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACActagcccatcatgagcggcacgccggagtcttcgcagaccagcagcagttcgtagttgaacgcccacgacagggcttcggtgcccttgaa                                                          >  2:1179645‑M2/1‑47 (MQ=255)                                                                                                          aaTGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACActagcccatcatgagcggcacgccggagtcttcgcagaccagcagcagttcgtagt                                                                                            <  1:1179136‑M2/101‑57 (MQ=255)                                                                                                          aaTGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACActagcccatcatgagcggcacgccggagtcttcgcagaccagcagcagttcgtagt                                                                                            >  2:1179136‑M2/1‑45 (MQ=255)                                                                                                                   cgAGAATAAAGAGAACGTTTTATCTGAGACACGGCTCTAGGCTGTAGTTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTACCCAGCCACTATGACCAACGTCTCTTAGGAATAGATTGAATTACTTCCCCAACCCCTTTg                                  <  2:400314/150‑1 (MQ=255)                                                                                                                     agaATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTACCCAGACACTATGAGCAATGTCTCTTAGGAATAGATTGAATTACTTCCCCAACCCCTTTGCt                                >  2:160982/1‑150 (MQ=255)                                                                                                                      gaATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTACCCAGACACTATGAGCAATGTCTCTTAGGAATAGATTGAATTACTTCCCCAACCCCTTTGCTa                               <  2:662381/150‑1 (MQ=255)                                                                                                                          aaaGAGAACGTTTTATCTGAGACAGGACActagcccatcatgagcggcacgccggagtcttcgcagaccagcagcagttcgtagttgaacgcccacgacagggcttcggtgcccttgaaggtttccagcagcagctcctgctcggggttg                           >  2:645209‑M2/1‑29 (MQ=255)                                                                                                                            agagAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTACCCAGACACTATGAGCAATGTCTCTTAGGAATAGATTGAATTACTTCCCCAACCCCTTTGCTAGCAgcg                         >  2:724607/1‑150 (MQ=255)                                                                                                                             gagaACGTTTTATCTGAGACAGGACActagcacatcatgagcggcacgccggagtcttcgcagaccagcagcagttcgtagttgaacgcccacgacagggcttcggtgcccttgaaggtttccagcagcagctcctgctcggggttggcc                        <  1:232313‑M2/150‑125 (MQ=255)                                                                                                                             gagaACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTACCCAGACACTATGAGCAATGTCTCTTAGGAATAGATTGAATTACTTCCCCAACCCCTTTGCTAGCAgcgc                        >  1:418360/1‑150 (MQ=255)                                                                                                                                aaCGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTACCCAGACACTATGAGCAAt                                                                           >  1:232582/1‑96 (MQ=255)                                                                                                                                aaCGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTACCCAGACACTATGAGCAAt                                                                           <  2:232582/96‑1 (MQ=255)                                                                                                                                       tATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTACCCAGACACTATGAGCAATGTCTCTTAGGAATAGATTGAATTACTTCCCCAACCCCTTTGCTAGCAGCGCGAAAGCtttt              <  2:307139/150‑1 (MQ=255)                                                                                                                                        aTCTGAGACAGGACActagcccatcatgagcggcacgccggagtcttcgcagaccagcagcagttcgtagttgaacgcccacgacagggcttcggtgcccttgaaggtttccagcagcagctcctgctcggggttggccaggttgtgaaa             >  1:1141214‑M2/1‑15 (MQ=255)                                                                                                                                         tCTGAGACAGGACActagcccatcatgagcggcacgccggagtcttcgcagaccagcagcagttcgtagttgaacgcccacgacagggcttc                                                                      <  2:680284‑M2/92‑79 (MQ=255)                                                                                                                                         tCTGAGACAGGACActagcccatcatgagcggcacgccggagtcttcgcagaccagcagcagttcgtagttgaacgcccacgacagggcttc                                                                      >  1:680284‑M2/1‑14 (MQ=255)                                                                                                                                          gtGAGAGAGGACACTAGAGTGTAGCTACTCAGACAGTAGTCGGTGAGGCGAGGCTGGGGAGGCCATACCCAGACACTATGAGCAATGTCTATTAGGAATAGATTGAATTGCTTCCCCAACCCCTTTGCTAGCAGCGCGAAAGCTTTTGAt           <  2:256358/149‑1 (MQ=255)                                                                                                                                           tGAGACAGGACActagcccatcatgagcggcacgccggagtcttcgcagaccagcagcagttcgtagttgaacgcccacgacagggcttcggtgcccttgaaggtttccagcagcagctcctgctcggggttggccaggttgtgaaactt          >  2:232313‑M2/1‑12 (MQ=255)                                                                                                                                            gagaCAGGACActagcccatcatgagcagcacgccggagtcttcgcagaccagcagcagttcgtagttgaacgcccacgacagggcttcggtgcccttgaaggtttccagcagcagctcctgctcggggttggccaggttgtgaaacttg         <  2:747093‑M2/150‑140 (MQ=255)                                                                                                                                              gaCAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTACCCAGACACTATGAGCAATGTCTCTTAGGAATAGATTGAAt                                                     <  2:1154488/104‑1 (MQ=255)                                                                                                                                              gaCAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTACCCAGACACTATGAGCAATGTCTCTTAGGAATAGATTGAAt                                                     >  1:1154488/1‑104 (MQ=255)                                                                                                                                               aCAGGACActagcccatcatgagcggcacgccggagtcttcgcagaccagcagcagttcgtagttgaacgcccacgacagggcttcggtgcccttgaaggtttccagcagcagctcctgctcggggttggccaggtt                   >  2:895330‑M2/1‑8 (MQ=255)                                                                                                                                               aCAGGACActagcccatcatgagcggcacgccggagtcttcgcagaccagcagcagttcgtagttgaacgcccacgacagggcttcggtgcccttgaaggtttccagcagcagctcctgctcggggttggccaggtt                   <  1:895330‑M2/137‑130 (MQ=255)                                                                                                                                                   gACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTACCCAGACACTATGAGCAATGTCTCTTAGGAATAGATTGAATTACTTCCCCAACCCCTTTGCTAGCAGCGCGAAAGCTTTTGATTAGTAGAAg  >  2:942333/1‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                   CTCCATTACCACGTTTTTAGCGCTGCACAACGCCCAACCCTCTCGGTACGTCTGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTACCCAGACACTATGAGCAATGTCTCTTAGGAATAGATTGAATTACTTCCCCAACCCCTTTGCTAGCAGCGCGAAAGCTTTTGATTAGTAGAAG  >  NC_002947/5062316‑5062611

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.