New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4861197	55 (1.220)	12 (0.330)	9/198	NT	19.4%	intergenic (‑103/+134)	ligA/PP_4275	DNA ligase/cell division protein ZipA
	?	NC_002947	= 4861238	56 (1.550)					intergenic (‑144/+93)	ligA/PP_4275	DNA ligase/cell division protein ZipA

TCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCTCGAACTCGACGATACGCTGGCGGTAGT  >  NC_002947/4861091‑4861386                                                                                                                                                    |                                                                                                                                                      tCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAgg                                                                                                                                                     <  1:149741‑M2/150‑3 (MQ=255)    tGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTTTTCGTGGGTAAACCCGCTCACACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagc                                                                                                                                                  >  2:64512‑M2/1‑145 (MQ=255)      ggATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgg                                                                                                                                                >  2:1156298‑M2/1‑143 (MQ=255)        aTTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggt                                                                                                                                              >  1:1182490‑M2/1‑141 (MQ=255)            gTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttac                                                                                                                                          >  1:1015823‑M2/1‑137 (MQ=255)             tcttctCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacc                                                                                                                                         <  2:997375‑M2/150‑15 (MQ=255)             tcttctCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAg                                                                                                                                                      >  2:1032884‑M2/1‑136 (MQ=255)             tcttctCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAg                                                                                                                                                      <  1:1032884‑M2/137‑2 (MQ=255)             tcttctCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGGGATGTACCTGTAggagcgggtttacc                                                                                                                                         <  1:1433‑M2/150‑15 (MQ=255)               ttctCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttaccc                                                                                                                                        <  1:427735‑M2/149‑16 (MQ=255)               ttctCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttaccc                                                                                                                                        >  2:427735‑M2/1‑134 (MQ=255)                 ctctTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcg                                                                                                                                     >  2:1433‑M2/1‑132 (MQ=255)                     tGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaaga                                                                                                                                 >  1:116253‑M2/1‑128 (MQ=255)                      gcaaagcaaaAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgg                                                                                                                                                <  1:491613‑M2/134‑8 (MQ=255)                      gcaaagcaaaAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgg                                                                                                                                                >  2:491613‑M2/1‑127 (MQ=255)                        aaagcaaaAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaagaggc                                                                                                                              >  2:149741‑M2/1‑125 (MQ=255)                        aaagcaaaAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaagaggc                                                                                                                              <  2:1073936‑M2/150‑26 (MQ=255)                          agcaaaAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCg                                                                                                                           >  2:484174/1‑150 (MQ=255)                                    cagcTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCaa                                                                                                                 <  2:949893/150‑1 (MQ=255)                                     agcTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGAAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAac                                                                                                                >  1:25027/1‑150 (MQ=255)                                       cgtGGGGTGGTGCGTGGGGTTCAAGGTGGCGGTTGACTGTGCCAGCCTCTTCGCGGGTGAACTCGCTGCCACAAGGGCGTCACATGCCCGAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAacga                                                                                                              <  2:234533/148‑1 (MQ=37)                                       cTTGGGGTGGTGCGTGGGGTTCCAGCTGTCGATGGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAacga                                                                                                              <  1:191240/150‑1 (MQ=255)                                          ggggTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCACTTCGCGGGTAAACCCGCTCCCCCAACGGTGTCACATGCCCTCGGGCGGTGATGTACCTGTAGGCCCG‑TGATTACCCGCGAAGAGGCCGGCACAGGCAAcgacga                                                                                                           <  1:401547/150‑1 (MQ=255)                                                     tGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCg                                                                                                >  2:23089/1‑150 (MQ=255)                                                     tGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCg                                                                                                >  2:396812/1‑150 (MQ=255)                                                         cgatctggTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCa                                                                                            <  1:634856/144‑1 (MQ=255)                                                            ccAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggt                                                                                                                                              >  2:1033917‑M2/1‑89 (MQ=255)                                                            ccAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggt                                                                                                                                              <  1:1033917‑M2/98‑10 (MQ=255)                                                            ccAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCaa                                                                                                                 <  1:945143/126‑1 (MQ=255)                                                            ccAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCaa                                                                                                                 >  2:945143/1‑126 (MQ=255)                                                            ccAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCa                                                                                         >  2:364066/1‑150 (MQ=255)                                                                gtgtCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGcc                                                                                     >  1:757442/1‑150 (MQ=255)                                                                gtgtCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTCCGCCTGATTGGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAgagatcg                                                                                     >  2:634856/1‑144 (MQ=255)                                                                  gtCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGACACACCACCTAAGGCCCTG‑CGCAACTACAATCTCGATGATGGCCGCCGAGGAGGGCTGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCt                                                                                   >  2:1041526/1‑150 (MQ=12)                                                                   tCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaa                                                                                                                                   <  2:245414‑M2/102‑21 (MQ=255)                                                                   tCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaa                                                                                                                                   >  1:245414‑M2/1‑82 (MQ=255)                                                                    cTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCa                                                                                 <  1:364066/150‑1 (MQ=255)                                                                      gTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgg                                                                                                                                                >  1:1186768‑M2/1‑79 (MQ=255)                                                                      gTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgg                                                                                                                                                <  2:1186768‑M2/86‑8 (MQ=255)                                                                      gTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAgg                                                                               >  1:33955/1‑150 (MQ=255)                                                                         gACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCTTAGGGCGGTGATGTACCTGTATGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGgctg                                                                            <  2:396768/150‑1 (MQ=255)                                                                            tgtgCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaagaggctggcacagtcaacagacacctggaacccc                                                                                                 >  1:874112‑M2/1‑73 (MQ=255)                                                                            tgtgCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaagaggctggcacagtcaacagacacctggaacccc                                                                                                 <  2:874112‑M2/127‑55 (MQ=255)                                                                            tgtgCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGcc                                                                                                                            >  1:908549/1‑99 (MQ=255)                                                                            tgtgCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGcc                                                                                                                            <  2:908549/99‑1 (MQ=255)                                                                            tgtgCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGgctgc                                                                           <  1:972495/148‑1 (MQ=255)                                                                            tgtgCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGgctgc                                                                           >  2:972495/1‑148 (MQ=255)                                                                            tgtgCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGctc                                                                         >  1:215505/1‑150 (MQ=255)                                                                            tgtgCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGctc                                                                         <  2:943285/150‑1 (MQ=255)                                                                                ccAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTc                                                                     <  2:120443/150‑1 (MQ=255)                                                                                 cAGCCTCTTCGCGGGTAAACCCGCTCCCACAGGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCg                                                                    >  2:741712/1‑150 (MQ=255)                                                                                   gCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaagag                                                                                                                                >  2:706462‑M2/1‑66 (MQ=255)                                                                                   gCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaagag                                                                                                                                <  1:706462‑M2/89‑24 (MQ=255)                                                                                   gCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTc                                                                  <  1:484174/150‑1 (MQ=255)                                                                                   gCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTc                                                                  <  1:741712/150‑1 (MQ=255)                                                                                       ctTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGa                                                              <  2:757442/150‑1 (MQ=255)                                                                                       ctTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGa                                                              <  1:1073936/150‑1 (MQ=255)                                                                                         tCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATc                                                            <  2:324601/150‑1 (MQ=255)                                                                                           gcgGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAAGCTGCTCTTTCTTCTGGTTCTg                                                          >  2:69652/1‑150 (MQ=255)                                                                                              ggTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAAcgacga                                                                                                           <  2:564187/98‑1 (MQ=255)                                                                                              ggTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAAcgacga                                                                                                           >  1:564187/1‑98 (MQ=255)                                                                                                tAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAgc                                                     >  2:476570/1‑150 (MQ=255)                                                                                                  aaCCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAgcgc                                                   >  2:348603/1‑150 (MQ=255)                                                                                                   aCCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTGggagcgggtttacccgcgaagaggctggcacagtcaacagacacctggaaccccacgcaccaccccaagctgctcttttgctttgcaagagaagacaaat                                                   <  1:970675‑M2/150‑101 (MQ=255)                                                                                                   aCCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaagaggctggcacagtcaacagacacctggaaccccacgcaccaccccaagctgctcttttgcttt                                                                   >  1:1142112‑M2/1‑50 (MQ=255)                                                                                                   aCCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaagaggctggcacagtcaacagacacctggaaccccacgcaccaccccaagctgctcttttgcttt                                                                   <  2:1142112‑M2/134‑85 (MQ=255)                                                                                                   aCCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGcc                                                                                     <  2:216073/115‑1 (MQ=255)                                                                                                   aCCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGcc                                                                                     >  1:216073/1‑115 (MQ=255)                                                                                                   aCCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCt                                                  >  1:299307/1‑150 (MQ=255)                                                                                                    cccGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaagaggctggcacagtcaacagacacctggaaccccacgcaccaccccaagctgctcttttgctttgcaagagaagacaaatc                                                  <  1:1174805‑M2/150‑102 (MQ=255)                                                                                                    cccGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaagaggctggcacagtcaacagacacctggaaccccacgcaccaccccaagctgctcttttgatttgcaagagaagacaaatc                                                  <  1:1126685‑M2/150‑102 (MQ=255)                                                                                                    cccGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaagaggccggcacagtcaacagacacctggaaccccacgcaccaccccaagctgctcttttgctttgcaagagaagacaaatc                                                  <  2:1006894‑M2/150‑102 (MQ=255)                                                                                                    cccGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCtt                                                 >  1:443774/1‑150 (MQ=255)                                                                                                     ccGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTc                                                >  2:1086893/1‑150 (MQ=255)                                                                                                      cGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCt                                               >  2:52507/1‑150 (MQ=255)                                                                                                       gCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTg                                              <  2:1154424/150‑1 (MQ=255)                                                                                                            cacaAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTCCCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTa                                         <  1:1164377/150‑1 (MQ=255)                                                                                                            cacaAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGgc                                                                              >  2:1000595/1‑113 (MQ=255)                                                                                                            cacaAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGgc                                                                              <  1:1000595/113‑1 (MQ=255)                                                                                                            cacaAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTa                                         >  2:806947/1‑150 (MQ=255)                                                                                                             acaAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaagaggctggcacagtcaacagacacctggaaccccacgcaccaccccaagctgctcttttgctttgcaagagaagacaaatcccat                                              <  1:486331‑M2/145‑106 (MQ=255)                                                                                                             acaAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaagaggctggcacagtcaacagacacctggaaccccacgcaccaccccaagctgctcttttgctttgcaagagaagacaaatcccat                                              >  2:486331‑M2/1‑40 (MQ=255)                                                                                                                      tCACATGCCCTAGGGCGGTGATGTACCTGTAggagcgggtttacccgcgaagaggccggcacagtcaacagacacctggaaccccacgcaccaccccaagctgctcttttgctttgcaagagaagacaaatcccatgaccgccgaaaccc                                >  1:1006894‑M2/1‑31 (MQ=255)                                                                                                                       cacaTGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGgcgc                              <  2:33955/150‑1 (MQ=255)                                                                                                                        acaTGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCt                             >  1:296573/1‑150 (MQ=255)                                                                                                                             cccTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACg                                  <  2:1200336/140‑1 (MQ=255)                                                                                                                             cccTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACg                                  >  1:1200336/1‑140 (MQ=255)                                                                                                                             cccTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCTCGAAc                        <  1:396812/150‑1 (MQ=255)                                                                                                                             cccTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTGTCGTCTGTATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCTCGAAc                        <  1:23089/150‑1 (MQ=255)                                                                                                                              ccTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCTCGAACt                       >  2:166046/1‑150 (MQ=255)                                                                                                                               cTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCTCGAACTc                      >  2:1183873/1‑150 (MQ=255)                                                                                                                               cTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCTCGAACTc                      <  1:1086893/150‑1 (MQ=255)                                                                                                                                  gggCGGTGATGTACCTGTAggagcgggtttacccgcgaagaggctggcacagtcaacagacacctggaaccccacgcaccaccccaagctgctcttttgatttgcaagagaagacaaatcccatgaccgccgaaacccgtatcctcgaac                    >  2:1126685‑M2/1‑19 (MQ=255)                                                                                                                                  gggCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCTCGAACTcgac                   <  2:25027/150‑1 (MQ=255)                                                                                                                                             tACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACg                                  <  2:169788/124‑1 (MQ=255)                                                                                                                                             tACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACg                                  >  1:169788/1‑124 (MQ=255)                                                                                                                                                   tAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCTCGAACTCGACGATACGCTGGCGGTAGt  >  1:58536/1‑150 (MQ=255)                                                                                                                                                    |                                                                                                                                                      TCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCTCGAACTCGACGATACGCTGGCGGTAGT  >  NC_002947/4861091‑4861386

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.