New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 786605 | 33 (2.040) | 3 (0.200) | 3/234 | NT | 10.0% | intergenic (+24/‑281) | PP_0673/ettA | hypothetical protein/ADP/ATP ratio sensor/translation inhibitor |
? | NC_002947 | = 786691 | 24 (1.620) | intergenic (+110/‑195) | PP_0673/ettA | hypothetical protein/ADP/ATP ratio sensor/translation inhibitor |
CCTGCCGCGGGGCAAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/786545‑786605 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtgccggccTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCACAGCAGCCGAAGAGACTCAGACGTGACGCTGTTTGGCCTTGCCCCG < NC_002947/786691‑786552 CCTGCCGCGGGGCAAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGC > 2:19425/1‑150 cgGCCGCGGGGCAAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCC < 1:43258/148‑1 CAAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCACAGCAGC < 1:19425/150‑1 TGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCACAGCAGCCGAAGAGACTCAGACGTGACGCTGTTTGGCCTTGCCCCG > 2:342778/1‑150 CCTGCCGCGGGGCAAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/786545‑786605 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtgccggccTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCACAGCAGCCGAAGAGACTCAGACGTGACGCTGTTTGGCCTTGCCCCG < NC_002947/786691‑786552 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |