New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 786605 | 33 (2.040) | 3 (0.200) | 3/234 | NT | 10.0% | intergenic (+24/‑281) | PP_0673/ettA | hypothetical protein/ADP/ATP ratio sensor/translation inhibitor |
? | NC_002947 | = 786691 | 24 (1.620) | intergenic (+110/‑195) | PP_0673/ettA | hypothetical protein/ADP/ATP ratio sensor/translation inhibitor |
CCGAGCAGCAACCTGCCCGCAGCGGCGGCTTCAGCGTGAAGTCCGCCTGGGCCGCGCGCCTGGCCGAGCAGGGCGACCGTTGCCGCCTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCC > NC_002947/786460‑786752 | ccGAGCAGCAACCTGCCCGCAGCGGCGGCTTCAGCGTGAAGTCCGCCTGGGCCGCGCGCCTGGCCGAGCAGGGCGACCGTTGCCGCCTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCttt > 2:248755/1‑150 (MQ=255) agcagcAACCTGCCCGCAGCGGCGGCTTCAGCGTGAAGTCCGCCTGGGCCGCGCGCCTGGCCGAGCAGGGCGACCGTTGCCGCCTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTcgc < 1:76291/150‑1 (MQ=255) cTGCCCGCAGCGGCGGCTTCAGCGTGAAGTCCGCCTGGGCCGCGCGCCTGGCCGAGCAGGGCGACCGTTGCCGCCTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGcc < 1:248755/150‑1 (MQ=255) cccGCAGCGGCGGCTTCAGCGTGAAGTCCGCCTGGGCCGCGCGCCTGGCCGAGCAGGGCGACCGTTGCCGCCTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGc > 2:284682/1‑150 (MQ=255) cGCAGCGGCGGCTTCAGCGTGAAGTCCGCCTGGGCCGCGCGCCTGGCCGAGCAGGGCGACCGTTGCCGCCTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTc < 1:32449/150‑1 (MQ=255) gCAGCGGCGGCTTCAGCGTGAAGTCCGCCTGGGCCGCGCGCCTGGCCGAGCAGGGCGACCGTTGCCGCCTGCCGCGCGCCTCACG‑CGAGCAGCGGCACGTCTGAGTCTCTTTGGATGGTGTGTTCGCCCTTTCGCGGGCTCGCCCGCTcc > 1:342778/1‑150 (MQ=255) ggcTTCAGCGTGAAGTCCGCCTGGGCCGCGCGCCTGGCCGAGCAGGGCGACCGTTGCCGCCTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGGCCGCTCCCCCAGGaa > 2:116588/1‑150 (MQ=255) tCAGCGTGAAGTCCGCCTGGGCCGCGCGCCTGGCCGAGCAGGGCGACCGTTGCCGCCTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATcgc < 2:281356/150‑1 (MQ=255) cAGCGTGAAGTCCGCCTGGGCCGCGCGCCTGGCCGAGCAGGGCGACCGTTGCCGCCTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATcgcg < 1:292284/150‑1 (MQ=255) gCGTGAAGTCCGCCTGGGCCGCGCGCCTGGCCGAGCAGGGCGACCGTTGCCGCCTGCCGCTGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGa < 1:284735/150‑1 (MQ=255) cGTGAAGTCCGCCTGGGCCGCGCGCCTGGCCGAGCAGGGCGACCGTTGCCGCCTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGAt > 2:245074/1‑150 (MQ=255) gCCGCGCGCCTGGCCGAGCAGGGCGACCGTTGCCGCCTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTgtgg < 1:228799/150‑1 (MQ=255) gCCGCGCGCCTGGCCGAGCAGGGCGACCGTTGCCGCCTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTgtgg < 1:97559/150‑1 (MQ=255) gggCGACCGTTGCCGCCTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTgg < 2:114196/141‑1 (MQ=255) gggCGACCGTTGCCGCCTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTgg > 1:114196/1‑141 (MQ=255) gCGACCGTTGCCGCCTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCACGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATg > 1:231389/1‑150 (MQ=255) ttGCCGCCTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGa > 2:316367/1‑150 (MQ=255) ccgccTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAaga < 1:245698/150‑1 (MQ=255) ccgccTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAaga < 1:284682/150‑1 (MQ=255) ccgccTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAaga < 2:264583/150‑1 (MQ=255) ccTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCtcttcgcgggcatgcccgctcccacagcgtcaccacagagcctgaagaatccgcgattcctgtgggagcgggcgagcccgcgaaagggc > 2:19425‑M1/1‑61 (MQ=255) cggccGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCtcttcgcgggcatgcccgctcccacagcgtcaccacagagcctgaagaatccgcgattcctgtgggagcgggcgagcccgcgaaagggcc < 1:43258‑M1/148‑91 (MQ=255) cgGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAggccggcaca > 2:342778‑M2/1‑140 (MQ=255) c‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCtcttcgcgggcatgcccgctcccacagcgtcaccacagagcctgaagaatccgcgattcctgtgggagcgggcgagcccgcgaaagggccggcacagcagc < 1:19425‑M1/150‑102 (MQ=255) aGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGctct < 1:321488/97‑1 (MQ=255) aGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGctct > 2:321488/1‑97 (MQ=255) ccAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGACTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAAt > 2:170536/1‑150 (MQ=255) aaCAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCa < 1:116588/150‑1 (MQ=255) tCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAAt < 2:159846/140‑1 (MQ=255) tCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAAt > 1:159846/1‑140 (MQ=255) tCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGt > 1:386401/1‑150 (MQ=255) gAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCAc < 1:170536/150‑1 (MQ=255) ctTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAAAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATca < 1:316367/150‑1 (MQ=255) ggCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACAcc < 1:245074/150‑1 (MQ=255) gctgctGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAggccggcacagcagccgaagagactcagacgtgacgctgtttggccttg < 1:19425‑M2/150‑50 (MQ=255) gctgctGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTAATCACAccc > 1:141197/1‑150 (MQ=255) ctgctgTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAAt < 1:308716/116‑1 (MQ=255) ctgctgTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAAt > 2:308716/1‑116 (MQ=255) tgtgCCGGCCtcttcgcgggcatgcccgctcccacagcgtcaccacagagcctgaagaatccgcgattcctgtgggagcgggcgagcccgcgaaagggccggcacagcagccgaagagactcagacgtgacgctgtttggccttgccccg > 2:342778‑M1/1‑10 (MQ=255) tgCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATc > 2:284029/1‑150 (MQ=255) ggCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAggccggcacagcagccgaagagactcagacgtgacgctgtttggccttgccccgcggccg < 1:43258‑M2/150‑61 (MQ=255) gCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAggccggcacagcagccgaagagactcagacgtgacgctgtttggccttgccccgcggcagg > 2:19425‑M2/1‑89 (MQ=255) | CCGAGCAGCAACCTGCCCGCAGCGGCGGCTTCAGCGTGAAGTCCGCCTGGGCCGCGCGCCTGGCCGAGCAGGGCGACCGTTGCCGCCTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCC > NC_002947/786460‑786752 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |