New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 808878 | 11 (0.680) | 3 (0.200) | 3/238 | NT | 19.9% | coding (483/1335 nt) | PP_0695 | hypothetical protein |
? | NC_002947 | = 808918 | 14 (0.930) | coding (443/1335 nt) | PP_0695 | hypothetical protein |
GTATTCGTCCCAGGTGGCCAGCACTTCGGCATAACGCTGGCGCAGCGGAATCTGGCGGTTGCTGGTCTTGGCCCGTTCGGCCACGGCCACCAGTGCCTGCTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/808776‑808878 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgctcgACATGCGCGTGCGCGATGTGCTGAAAAAGCTCGACAACGACGAGCAGGCACTGGTGGCCGTGGCCGAACGGGCCAAGACCAGCAACCGCCAGATTCCGCTGCGCCAGCGTTATGCCGAAGTGCTGGCCACCTGGGACGAATACGTC < NC_002947/808918‑808773 GTATTCGTCCCAGGTGGCCAGCACTTCGGCATAACGCTGGCGCAGCGGAATCTGGCGGTTGCTGGTCTTGGCCCGTTCGGCCACGGCCACCAGTGCCTGCTCGACATGCGCGTGCGCGATGTGCTGAAAAAGCTCGACAACGACGAGCAG < 1:225174/150‑1 ATAACGCTGGCGCAGCGGAATCTGGCGGTTGCTGGTCTTGGCCCGTTCGGCCACGGCCACCAGTGCCTGCTCGACATGCGCGTGCGCGATGTGCTGAAAAAGCTCGACAACGACGAGCAGG < 1:44431/121‑1 ATAACGCTGGCGCAGCGGAATCTGGCGGTTGCTGGTCTTGGCCCGTTCGGCCACGGCCACCAGTGCCTGCTCGACATGCGCGTGCGCGATGTGCTGAAAAAGCTCGACAACGACGAGCAGG > 2:44431/1‑121 CTCGACATGCGCGTGCGCGATGTGCTGAAAAAGCTCGACAACGACGAGCAGGCACTGGTGGCCGTGGCCGAACGGGCCAAGACCAGCAACCGCCAGATTCCGCTGCGCCAGCGTTATGCCGAAGTGCTGGCCACCTGGGACGAATACGTC < 1:307445/150‑1 GTATTCGTCCCAGGTGGCCAGCACTTCGGCATAACGCTGGCGCAGCGGAATCTGGCGGTTGCTGGTCTTGGCCCGTTCGGCCACGGCCACCAGTGCCTGCTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/808776‑808878 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgctcgACATGCGCGTGCGCGATGTGCTGAAAAAGCTCGACAACGACGAGCAGGCACTGGTGGCCGTGGCCGAACGGGCCAAGACCAGCAACCGCCAGATTCCGCTGCGCCAGCGTTATGCCGAAGTGCTGGCCACCTGGGACGAATACGTC < NC_002947/808918‑808773 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |