New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 808878 | 11 (0.680) | 3 (0.200) | 3/238 | NT | 19.9% | coding (483/1335 nt) | PP_0695 | hypothetical protein |
? | NC_002947 | = 808918 | 14 (0.930) | coding (443/1335 nt) | PP_0695 | hypothetical protein |
GACGTATTCGTCCCAGGTGGCCAGCACTTCGGCATAACGCTGGCGCAGCGGAATCTGGCGGTTGCTGGTCTTGGCCCGTTCGGCCACGGCCACCAGTGCCTGCTCGTCGTTGTCGAGCTTTTTCAGCACATCGCGCACGCGCATGTCGAGCAGGCGCAACTGGCGTGCCAGGTCGTCGCTGTCGCGGTTGTCGAAGGCATCCTGGATGTGCCCGGCCAGGCGCTCCAGGTGGCGCAAGTAGGCTTCGATCTCCAGGCACAGGCC > NC_002947/808773‑809036 | gACGTATTCGTCCCAGGTGGCCAGCACTTCGGCATAACGCTGGCGCAGCGGAATCTGGCGGTTGCTGGTCTTGGCCCGTTCGGCCACGGCCACCAGTGCCTGCTCGTCGTTGTCGAGCTTTTTCAGCACATCGCGCACGCGCATGTcgag < 1:307445‑M2/150‑5 (MQ=255) gTATTCGTCCCAGGTGGACAGCACAACAGCATAAGGATGATGAAGTAAATTCTAGCGTGTGCGTGTTGTTGCCCGTTCGGCTACGGCCCCCAGTGCCTGCTAGTCGTTGTCGCGCTTTTTCAGCACATTGCGCACGCGCATGTCGAGCAg < 2:97873/150‑1 (MQ=255) gtGCGGGTCTTGGCCCGTTCGGCCACGGCCACCAGTGCCTGGTCGTCGTTGTCGAGCTTTTTCAGCACATCGCGCACGGGCATGTCGAGCAGGCGCAACTGGCGTGCCAGGTCGTCGCTGTCGCGGTTGTCGAAGGCATCCTGGATGTGc < 2:85041/149‑1 (MQ=255) cTTGGCCCGTTCGGCCACGGCCACCAGTGCCTGCTCGTCGTTGTCGAGCTTTTTCAGCACATCGCGCACGCGCATGTCGAGCAGGCGCAACTGGCGTGCCAGGTCGTCGCTGTCGCGGTTGTCGAAGGCATCCTGGATGTGCCCGGCCAg > 1:414198/1‑150 (MQ=255) gCCCGTTCGGCCACGGCCACCAGTGCCTGCTCGTCGTTGTCGAGCTTTTTCAGCACATCGCGCACGCGCATGTCGAGCAGGCGCAACTGGc < 1:291442/91‑1 (MQ=255) gCCCGTTCGGCCACGGCCACCAGTGCCTGCTCGTCGTTGTCGAGCTTTTTCAGCACATCGCGCACGCGCATGTCGAGCAGGCGCAACTGGc > 2:291442/1‑91 (MQ=255) cccGTTCGGCCACGGCCACCAGTGCCTGCTCGTCGTTGTCGAGCTTTTTCAGCACATCGCGCACGCGCATGTCGAGCAGGCGCAACTGGCGTGCCAGGTCGTCGCTGTCGCGGTTGTCGAAGGCATCCTGGATGTGCCCGGCCAGgcgc > 1:397167/1‑149 (MQ=255) cccGTTCGGCCACGGCCACCAGTGCCTGCTCGTCGTTGTCGAGCTTTTTCAGCACATCGCGCACGCGCATGTCGAGCAGGCGCAACTGGCGTGCCAGGTCGTCGCTGTCGCGGTTGTCGAAGGCATCCTGGATGTGCCCGGCCAGgcgc < 2:397167/149‑1 (MQ=255) gccacggccacCAGTGCCTGCTCGTCGTTGTCGAGCTTTTTCAGCACATCGCGCACGCGCATGTCGAGCAGGCGCAACTGGCGTGCCAGGTCGTCGCTGTCGCGGTTGTCGAAGGCATCCTGGATGTGCCCGGCCAGGCGCTCCAGGTgg > 1:363999/1‑150 (MQ=255) ccacggccacCAGTGCCTGCTCGTCGTTGTCGAGCTTTTTCAGCACATCGCGCACGCGCATGTCGAGCAGGCGCAACTGGCGTGCCAGGTCGTCGCTGTCGCGGTTGTCGAAGGCATCCTGGATGTGCCCGGCCAGGCGCTCCAGGTGgc < 2:363999/150‑1 (MQ=255) cacggccacCAGTGCCTGCTCGTCGTTGTCGAGCTTTTTCAGCACATCGCGCACGCGCATGTCGAGCAGGCGCAACTGGCGTGCCAGGTCGTCGCTGTCGCGGTTGTCGAAGGCATCCTGGATGTGCCCGGCCAGGCGCTCCAGGTGgcg > 1:16557/1‑150 (MQ=255) ccTGCTCGTCGTTGTCGAGCTTTTTCAGCACATCGCGCACGCGCATGTcgagcaggcactggtggccgtggccgaacgggccaagaccagcaaccgccagattccgctgcgccagcgttat < 1:44431‑M2/121‑74 (MQ=255) ccTGCTCGTCGTTGTCGAGCTTTTTCAGCACATCGCGCACGCGCATGTcgagcaggcactggtggccgtggccgaacgggccaagaccagcaaccgccagattccgctgcgccagcgttat > 2:44431‑M2/1‑48 (MQ=255) cTGCTCGTCGTTGTCGAGCTTTTTCAGCACATCGCGCACGCGCATGTcgagcaggcactggtggccgtggccgaacgggccaagaccagcaaccgccagattccgctgcgccagcgttatgccgaagtgctggccacctgggacgaatac < 1:225174‑M2/150‑104 (MQ=255) gAGCTTTTTCAGCACATCGCGCACGCGCATGTCGAGCAGGCGCAACTGGCGTGCCAGGTCGTCGCTGTCGCGGTTGTCGAAGGCATCCTGGATGTGCCCGGCCAGGCGCTCCAGGTGGCGCAAGTAGGCTTCGATCTCCAGGCACAGGcc > 1:178246/1‑150 (MQ=255) tttttCAGCACATCGCGCACGCGCATGTCGAGCAGGCGCAACTGGCGTGCCAGGTCGTCGCTg > 2:190604/1‑63 (MQ=255) tttttCAGCACATCGCGCACGCGCATGTCGAGCAGGCGCAACTGGCGTGCCAGGTCGTCGCTg < 1:190604/63‑1 (MQ=255) tCGCGCACGCGCATGTCGAGCAGGCGCAACTGGCGTGCCAGGTCGTCGCTGTCGCGGTTGTCGAAGGCATCCTGGATGTGCCCGGCCAGGCGCTCCAGGTGGCGCAAGTAGGCTTCg > 1:71476/1‑117 (MQ=255) tCGCGCACGCGCATGTCGAGCAGGCGCAACTGGCGTGCCAGGTCGTCGCTGTCGCGGTTGTCGAAGGCATCCTGGATGTGCCCGGCCAGGCGCTCCAGGTGGCGCAAGTAGGCTTCg < 2:71476/117‑1 (MQ=255) | GACGTATTCGTCCCAGGTGGCCAGCACTTCGGCATAACGCTGGCGCAGCGGAATCTGGCGGTTGCTGGTCTTGGCCCGTTCGGCCACGGCCACCAGTGCCTGCTCGTCGTTGTCGAGCTTTTTCAGCACATCGCGCACGCGCATGTCGAGCAGGCGCAACTGGCGTGCCAGGTCGTCGCTGTCGCGGTTGTCGAAGGCATCCTGGATGTGCCCGGCCAGGCGCTCCAGGTGGCGCAAGTAGGCTTCGATCTCCAGGCACAGGCC > NC_002947/808773‑809036 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |