New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1426221 = | NA (NA) | 3 (0.200) | 3/242 | NT | 100% | coding (112/1422 nt) | PP_1250 | group II intron‑encoding maturase |
? | NC_002947 | 1430033 = | 0 (0.000) | coding (64/1422 nt) | PP_1252 | group II intron‑encoding maturase |
TGACCACGCGTTGATACGCACGTCTGAGGTTGGCCGGTGCAAGCACCCGCTCCATCAGCGTGTCCGGCTCCGCGTTCGTCCACGTCACGGACGCCGTCGATACCTTTGCactgtca‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1426329‑1426221 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACTGTCATCCCGAGCTCCGGCCAGAAGCCGAGGGTGACGCCTGACAGTGCAAAGGTATCGACGGCGTCCGTGACGTGGACGAACGCGGAGCCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGACGTGCGTATCAACGTGTG > NC_002947/1430033‑1430185 TGACCACGCGTTGATACGCACGTCTGAGGTTGGCCGGTGCAAGCACCCGCTCCATCAGCGTGTCCGGCTCCGCGTTCGTCCACGTCACGGACGCCGTCGATACCTTTGCACTGTCATCCCGAGCTCCGGCCAGAAGCCGAGGGTGACGCC > 2:376879/1‑150 GCGTTGATACGCACGTCTGAGGTTGGCCGGTGCAAGCACCCGCTCCATCAGCGTGTCCGGCTCCGCGTTCGTCCACGTCACGGACGCCGTCGATACCTTTGCACTGTCATCCCGAGCTCCGGCCAGAAGCCGAGGGTGACGCCTGACAGT < 1:376879/150‑1 GATACGCACGCCTGAGGTTGGCCGGTGCAAGCACCCGCTCCATCAGCGTGTCCGGCTCCGCGTTCGTCCACGTCGCTGACGCCGCCGGCACCTTTGCACTGTCATCCCGAATCCCGGCCAGAAGCCGAGGGTGATGCCTGACAGTGCAAA < 1:19643/150‑1 ACTGTCATCCCGAGCTCCGGCCAGAAGCCGGGGGTGACGCCTGACAGTGCAAAGGTATCGACGGCGTCCGTGACGTGGACGAACGCGGAGCCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGACGTGCGTATCAACGT < 2:270546/150‑1 GTCATCCCGAGCTCCGGCCAGAAGCCGAGGGTGACGCCTGACAGTGCAAAGGTATCGACGGCGTCCGTGACGTGGACGAACGCGGAGCCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGACGTGCGTATCACCGTatc < 2:333214/150‑4 TCATCCCGAGCTCCGGCCAGAAGCCGAGGGTGACGCCTGACAGTGCAAAGGTATCGACGGCGTCCGTGACGTGGACGAACGCGGAGCCGGACACGC > 1:244996/1‑96 TCATCCCGAGCTCCGGCCAGAAGCCGAGGGTGACGCCTGACAGTGCAAAGGTATCGACGGCGTCCGTGACGTGGACGAACGCGGAGCCGGACACGC < 2:244996/96‑1 TGACCACGCGTTGATACGCACGTCTGAGGTTGGCCGGTGCAAGCACCCGCTCCATCAGCGTGTCCGGCTCCGCGTTCGTCCACGTCACGGACGCCGTCGATACCTTTGCactgtca‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1426329‑1426221 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACTGTCATCCCGAGCTCCGGCCAGAAGCCGAGGGTGACGCCTGACAGTGCAAAGGTATCGACGGCGTCCGTGACGTGGACGAACGCGGAGCCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGACGTGCGTATCAACGTGTG > NC_002947/1430033‑1430185 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |