New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1426221 = | NA (NA) | 3 (0.200) | 3/242 | NT | 100% | coding (112/1422 nt) | PP_1250 | group II intron‑encoding maturase |
? | NC_002947 | 1430033 = | 0 (0.000) | coding (64/1422 nt) | PP_1252 | group II intron‑encoding maturase |
CCGTAGTAAGTGGCGGTTAACCGCGCCACCAAGGGCCGAACAGGTTATGCCGCCAGTAGGCGTCGCCGTCTCGTTGGTAACCGTAATGCAGAAATTTCCCACAGCGGAAACTGTCATCCCGAGCTCCGGCCAGAAGCCGAGGGTGACGCCTGACAGTGCAAAGGTATCGACGGCGTCCGTG‑ACGTGGACGAACGCGGAGCCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGACGTGCGTATCAACGT > NC_002947/1429924‑1430182 | tgaccacgcgttgatacgcacgtctgaggttggccggtgcaagcacccgctccatcagcgtgtccggctccgcgttcgtccacgtcacggacgccgtcgatacctttgcACTGTCATCCCGAGCTCCGGCCAGAAGCCGAGGGTGACGcc > 2:376879‑M2/110‑150 (MQ=255) gcgttgatacgcacgtctgaggttggccggtgcaagcacccgctccatcagcgtgtccggctccgcgttcgtccacgtcacggacgccgtcgatacctttgcACTGTCATCCCGAGCTCCGGCCAGAAGCCGAGGGTGACGCCTGACAGt < 1:376879‑M2/48‑1 (MQ=255) gatacgcacgcctgaggttggccggtgcaagcacccgctccatcagcgtgtccggctccgcgttcgtccacgtcgctgacgccgccggcacctttgcACTGTCATCCCGAATCCCGGCCAGAAGCCGAGGGTGATGCCTGACAGTGCaaa < 1:19643‑M2/53‑1 (MQ=255) aCTGTCATCCCGAGCTCCGGCCAGAAGCCGAGGGTGACGCCTGACAGTGCAAAGGTATCGACGGCGTCCGTGCACG‑GCGCGGACGCGGCGCCGGACAAGCTGAGAGGACGTGGGCCCGCAGCGGGCACCCTCAGACGTGCGAATCAACgt > 1:321469/1‑150 (MQ=2) ACTGTCATCCCGAGCTCCGGCCAGAAGCCGGGGGTGACGCCTGACAGTGCAAAGGTATCGACGGCGTCCGTG‑ACGTGGACGAACGCGGAGCCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGACGTGCGTATCAACgt < 2:270546‑M2/150‑1 (MQ=255) | CCGTAGTAAGTGGCGGTTAACCGCGCCACCAAGGGCCGAACAGGTTATGCCGCCAGTAGGCGTCGCCGTCTCGTTGGTAACCGTAATGCAGAAATTTCCCACAGCGGAAACTGTCATCCCGAGCTCCGGCCAGAAGCCGAGGGTGACGCCTGACAGTGCAAAGGTATCGACGGCGTCCGTG‑ACGTGGACGAACGCGGAGCCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGACGTGCGTATCAACGT > NC_002947/1429924‑1430182 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |