New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1758576 = | 8 (0.490) | 3 (0.200) | 3/238 | NT | 24.6% | coding (1590/1686 nt) | PP_1563 | terminase large subunit |
? | NC_002947 | 1758613 = | 11 (0.730) | coding (1627/1686 nt) | PP_1563 | terminase large subunit |
CAAACCGCCGGCGGCAAGCACCAGAAAGATGATCAGGCCAGTTTTCATAGGTTTTCCCGTTAGCCAACCACGATCGGGCTGGCAAGAAAGTCATCGAAGTGGCCGGAGTCGTCGATACCGAGCTTGATGGCC‑ACGGCGCAGCCGGTGATCAAGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1758731‑1758576 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcaagctcGGTATCGACGACTCCGGCCACTTCGATGACTTTCTTGCCAGCCCGATCGTGGTTGGCTAACGGGAAAACCTATGAAAACTGGCCTGATCATCTTTCTGGTGCTT > NC_002947/1758613‑1758716 CAAACCGCCGGCGGCAAGCACCAGAAAGATGATCATGGCAGTTTTCATAGGTTTTCCCGTTAGGCAACAACGATCGGGCTGGCAAGAAAGTCATCGAAGTGGCCGGAGTCGTCGATACCGAGCTTGATGGCC‑ACGGCGCAGCCGGTGATC < 2:327981/150‑1 AAACCGCCGGCGGCAAGCACCAGAAAGATGATCAGGCGAGTTTTCATAGGTTTTCCCGTTAGCCAACCACGATCGGGCTGGCTAGAAAGTCATCGAAGTGGCCGGAGTCGTGGATACCGAGCTTGATGGCC‑ACGGCGCAGCCTGTGATCA > 1:172021/1‑150 AGAAAGATGATCAGGCCAGTTTTCATAGGTTTTCCCGTTAGCCAACCACGATCGGGCTGGCAAGAAAGTCATCGAAGTGGCCGGAGTCGTCGATACCGAGCTTGATCACCGGCTGCGCCG‑TGGCCATCAAGCTCGGTATCGACGACTCCG < 1:236404/150‑1 CGAGCTTGATGGCC‑ACGGCGCAGCCGGTGATCAAGCTCGGTATCGACGACTCCGGCCACTTCGATGACTTTCTTGCCAGCCCGATCGTGGTTGGCTAACGGGAAAACCTATGAAAACTGGCCTGATCATCTTTCTGGTGCTT > 2:113025/1‑142 CGAGCTTGATGGCC‑ACGGCACAGCCGGTGATCAAGCTCGGTATCGACGACTCCGGCCACTTCGATGACTTTCTTGCCAGCCCGATCGTGGTTGGCTAACGGGAAAACCTATGAAAACTGGCCTGATCATCTTTCTGGTGCTT < 1:113025/142‑1 CAAACCGCCGGCGGCAAGCACCAGAAAGATGATCAGGCCAGTTTTCATAGGTTTTCCCGTTAGCCAACCACGATCGGGCTGGCAAGAAAGTCATCGAAGTGGCCGGAGTCGTCGATACCGAGCTTGATGGCC‑ACGGCGCAGCCGGTGATCAAGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1758731‑1758576 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcaagctcGGTATCGACGACTCCGGCCACTTCGATGACTTTCTTGCCAGCCCGATCGTGGTTGGCTAACGGGAAAACCTATGAAAACTGGCCTGATCATCTTTCTGGTGCTT > NC_002947/1758613‑1758716 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |