New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1965064 = | 12 (0.740) | 3 (0.190) | 3/246 | NT | 19.7% | coding (1233/2526 nt) | yegE | phosphodiesterase domain‑containing diguanylate cyclase |
? | NC_002947 | 1965122 = | 13 (0.840) | coding (1291/2526 nt) | yegE | phosphodiesterase domain‑containing diguanylate cyclase |
GTCGAGGAACATCAGCGAATGCCGCCCGGCCTGGCGCGCCAGGTCGTTGAGCGCCTGCTCCAGGCGGTATTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1965136‑1965064 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attcgCTGATGTTCCTCGACCTCGACCAGTTCAAGCTGGTCAACGACACCTGTGGCCACGCTGCCGGCGATGAGTTGCTGCGGCACATCTGCGCGGTGCTGCAATCCGGCCTGCGTGAGGGCGATACGCTGGCGCGGCTGGGCGGCGATG > NC_002947/1965122‑1965266 GTCGAGGAACATCAGCGAATGCCGCCCGGCCTGGCGCGCCAGGTCGTTGAGCGCCTGCTCCAGGCGGTATTCGCTGATGTTCCTCGACCTCGACCAGTTCAAGCTGGTCAACGACACCTGTGGCCACGCTGCCGGCGATGAGTTGCTGCG > 1:44243/1‑150 AATGCCGCCCGGCCTGGCGCGCCAGGTCGTTGAGCGCCTGCTCCAGGCGGTATTCGCTGATGTTCCTCGACCTCGACCAGTTCAAGCTGGTCAACGACACCTGTGGCCACGCTGCCGGCGATGAGTTGCTGC < 1:11155/132‑1 AATGCCGCCCGGCCTGGCGCGCCAGGTCGTTGAGCGCCTGCTCCAGGCGGTATTCGCTGATGTTCCTCGACCTCGACCAGTTCAAGCTGGTCAACGACACCTGTGGCCACGCTGCCGGCGATGAGTTGCTGC > 2:11155/1‑132 ATTCGCTGATGTTCCTCGACCTCGACCAGTTCAAGCTGGTCAACGACACCTGTGGCCACGCTGCCGGCGATGAGTTGCTGCGGCACATCTGCGCGGTGCTGCAATCCGGCCTGCGTGAGGGCGATACGCTGGCGCGGCTGGGCGGCGATG > 1:422485/1‑150 GTCGAGGAACATCAGCGAATGCCGCCCGGCCTGGCGCGCCAGGTCGTTGAGCGCCTGCTCCAGGCGGTATTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1965136‑1965064 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attcgCTGATGTTCCTCGACCTCGACCAGTTCAAGCTGGTCAACGACACCTGTGGCCACGCTGCCGGCGATGAGTTGCTGCGGCACATCTGCGCGGTGCTGCAATCCGGCCTGCGTGAGGGCGATACGCTGGCGCGGCTGGGCGGCGATG > NC_002947/1965122‑1965266 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |