New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3153866 | 11 (0.680) | 3 (0.190) | 3/244 | NT | 19.7% | coding (27/1326 nt) | PP_2770 | hypothetical protein |
? | NC_002947 | = 3153911 | 14 (0.910) | coding (72/1326 nt) | PP_2770 | hypothetical protein |
CTGAGCGAACCTTCGCACCGGGCTTCGCCCGCCTTATGCCACTGCCCACTGATTTGTAAAGGATAACCACGATGTCGACCCGATCCGTCCTCGGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3153769‑3153866 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgcGTGCACGTTGAGTGCGCCGGCAGCTAAGCTTACGGCCAGCGCCAGGCGGCCGAGGA < NC_002947/3153911‑3153856 CTGAGCGAACCTTCGCACCGGGCTTCGCCCGCCTTATGCCACTGCCCACTGATTTGTAAAGGATAACCACGATGTCGACCCGATCCGTCCTCGGCCGCGTGCACGTTGAGTGCGCCGGCAGCTAAGCTTACGGCCAGCGCCAGGCGGCCG < 1:222320/150‑1 CCCACTGATTTGTAAAGGATAACCACGATGTCGACCCGATCCGTCCTCGGCCGCGTGCACGTTGAGTGCGCCGGCAGCTAAGCTTACGGCCAGCGCCAGGCGGCCGAGGA < 1:45686/110‑1 CCCACTGATTTGTAAAGGATAACCACGATGTCGACCCGATCCGTCCTCGGCCGCGTGCACGTTGAGTGCGCCGGCAGCTAAGCTTACGGCCAGCGCCAGGCGGCCGAGGA > 2:45686/1‑110 CTGAGCGAACCTTCGCACCGGGCTTCGCCCGCCTTATGCCACTGCCCACTGATTTGTAAAGGATAACCACGATGTCGACCCGATCCGTCCTCGGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3153769‑3153866 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgcGTGCACGTTGAGTGCGCCGGCAGCTAAGCTTACGGCCAGCGCCAGGCGGCCGAGGA < NC_002947/3153911‑3153856 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |