New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3153866	11 (0.680)	3 (0.190)	3/244	NT	19.7%	coding (27/1326 nt)	PP_2770	hypothetical protein
	?	NC_002947	= 3153911	14 (0.910)					coding (72/1326 nt)	PP_2770	hypothetical protein

GGGCTTCGCCCGCCTTATGCCACTGCCCACTGATTTGTAAAGGATAACCACGATGTCGACCCGATCCGTCCTCGGCCGCCTGGCGCTGGCCGTAAGCTTAGCTGCCGGCGCACTCAACGTGCACGCGGCCAACGAACAGTATTTCCCCCTGCAGAGCTACCGCGTTGGCCCCTATGCCGCAGGTGGTACCGGTTTCTTCGGTGGTTTTATCGATTACCTCAAGTACGTCAACGCCCAGGGCGGCGTGAAT  >  NC_002947/3153788‑3154037                                                                                                                            |                                                                                                                               gggCTTCGCCCGCCTTATGCCACTGCCCACTGATTTGTAAAGGATAACCACGATGTCGACCCGATCCGTCCTCGGCCGCCTGGCGCTGGCCGTAAGCTTAGCTGCCGGCGCACTCAACGTGCACGCGGCCAACGAACAGTATTTCCCCCt                                                                                                      >  2:438210/1‑150 (MQ=255)                    ccACTGCCCACTGATTTGTAAAGGATAACCACGATGTCGACCCGATCCGTCCTCGGCCGCCTGGCGCTGGCCGTAAGCTTAGCTGCCGGCGCACTCAACGTGCACGCGGCCAACGAACa                                                                                                                  >  1:180830/1‑119 (MQ=255)                    ccACTGCCCACTGATTTGTAAAGGATAACCACGATGTCGACCCGATCCGTCCTCGGCCGCCTGGCGCTGGCCGTAAGCTTAGCTGCCGGCGCACTCAACGTGCACGCGGCCAACGAACa                                                                                                                  <  2:180830/119‑1 (MQ=255)                                           gATAACCACGATGTCGACCCGATCCGTCCTCGGCCGCCTGGCGCTGGCCGTAAGCTTAGCTGCCGGCGCACTCAACGTGCACGCGGCCAACGAACAGTATTCCCCCCTGCAGAGCTACAGCGTTGGCCCCTATGCCGCAGGTGGTACCgg                                                            >  2:227651/1‑150 (MQ=255)                                                  aCGATGTCGACCCGATCCGTCCTCGGCCGCCTGGCGCTGGCCGTAAGCTTAGCTGCCGGCGCACTCAACGTGCACGCGGCCAACGAACAGTATTTCCCCCTGCAGAGCTACCGCGTTGGCCCCTATGCCGCAGGTGGTACCGGTttcttc                                                     <  1:341686/150‑1 (MQ=255)                                                      tGTCGACCCGATCCGTCCTCGGCCGCCTGGCGCTGGCCGTAAGCTTAGCTGCCGGCGCACTCAACGTGCACGCGGCCAACGAACAGTATTTCCCCCTGCAGAGCTACCGCGTTGGCCCCTATGCCGCAGGTGGTACCGGTTTCTTCggtg                                                 <  1:438210/150‑1 (MQ=255)                                                        tCGACTCGATCCTTCCTCGGCCGCCTGGCGCTGGCCGTAAGCTTAGCTGCCGGCGCACTCAACGTGCACGCGGCCAACGAACAGTATTTCCCCCTGCAGAGCTACCGCGTTGGCCCCTATGCCGCAGGTGGTACCGGTTTCTTCggtggt                                               <  1:241849/150‑1 (MQ=255)                                                          gACCCGATCCGTCCTCGGCCGCCTGGCGCTGGCCGTAAGCTTAGCTGCCGGCGCACTCAACGTGCACGCGGCCAACGAACAGTATTTCCCCCTGCAGAGCTACCGCGTTGGCCCCTATGCCGCAggtg                                                                   >  2:37586/1‑128 (MQ=255)                                                          gACCCGATCCGTCCTCGGCCGCCTGGCGCTGGCCGTAAGCTTAGCTGCCGGCGCACTCAACGTGCACGCGGCCAACGAACAGTATTTCCCCCTGCAGAGCTACCGCGTTGGCCCCTATGCCGCAggtg                                                                   <  1:37586/128‑1 (MQ=255)                                                            cccGATCCGTCCTCGGCCGCCTGGCGCTGGCCGTAAGCTTAGCTGCCGGCGCACTCAACGTGCACGCGGCCAACGAACAGTATTTCCCCCTGCAGAGCTACCGCGTTGGCCCCTATGCCGCAGGTGGTACCGGTTTCTTCGGTGGTTTTa                                           >  1:238350/1‑150 (MQ=255)                                                                     tCCTCGGCCGCCTGGCGCTGGCCGTAAGCTTAGCTGCCGGCGCACTCAACGTGCACgcggccgaggacggatcgggtcgacatcgtggttatcctttacaaatcagtggg                                                                          >  2:45686‑M2/1‑56 (MQ=255)                                                                     tCCTCGGCCGCCTGGCGCTGGCCGTAAGCTTAGCTGCCGGCGCACTCAACGTGCACgcggccgaggacggatcgggtcgacatcgtggttatcctttacaaatcagtggg                                                                          <  1:45686‑M2/110‑55 (MQ=255)                                                                         cGGCCGCCTGGCGCTGGCCGTAAGCTTAGCTGCCGGCGCACTCAACGTGCACgcggccgaggacggatcgggtcgacatcgtggttatcctttacaaatcagtgggcagtggcataaggcgggcgaagcccggtgcgaaggttcgctcag                              <  1:222320‑M2/150‑99 (MQ=255)                                                                                                 gttAGCTGCCGGCGCACTCAACGTGCACGCGGCCTATGATCAGTATTTCCCCCTGCAGAGCTACCGCGTTGGCCCCTATGCCGCAGGTGGTACCGGTTTCTTCGGTGGTTTTATCGATTACCTCAAGTACGTCAACGCCCAGGGCGGCGt      <  1:382422/149‑1 (MQ=255)                                                                                                     gCTGCCGGCGCACTCAACGTGCACGCGGCCAAAGAAGCGTCCTTCCCCCTGCGGAGCTACCGCGTTGGCCCCTATGCCGCAGGTGGTACCGGTTTCTTCGGTGGTTTTATCGATTACCTCAAGTACGTCAACGCCCAGGGCGGCGTGAAt  <  1:363518/150‑1 (MQ=255)                                                                                                               cACTCAACGTGCACGCGGCCAACGAACAGTATTTCCCCCTGCAGAGCTACCGCGTTGGCCCCTATGCCGCAggt                                                                    <  2:110906/74‑1 (MQ=255)                                                                                                               cACTCAACGTGCACGCGGCCAACGAACAGTATTTCCCCCTGCAGAGCTACCGCGTTGGCCCCTATGCCGCAggt                                                                    >  1:110906/1‑74 (MQ=255)                                                                                                                            |                                                                                                                               GGGCTTCGCCCGCCTTATGCCACTGCCCACTGATTTGTAAAGGATAACCACGATGTCGACCCGATCCGTCCTCGGCCGCCTGGCGCTGGCCGTAAGCTTAGCTGCCGGCGCACTCAACGTGCACGCGGCCAACGAACAGTATTTCCCCCTGCAGAGCTACCGCGTTGGCCCCTATGCCGCAGGTGGTACCGGTTTCTTCGGTGGTTTTATCGATTACCTCAAGTACGTCAACGCCCAGGGCGGCGTGAAT  >  NC_002947/3153788‑3154037

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.