New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3356367	11 (0.680)	4 (0.250)	4/250	NT	26.0%	coding (524/891 nt)	PP_2952	LysR family transcriptional regulator
	?	NC_002947	= 3356386	12 (0.760)					coding (505/891 nt)	PP_2952	LysR family transcriptional regulator

GTAGACCCGCCCCTGCTGCATGTACAGCAGGCACTGGTGTTCGAGCAGATCTCCAGGCGCTTGGACGGTGCCTTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3356291‑3356367 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccTCGCCCGAGTACCTGGCGCGGCAAGG  <  NC_002947/3356386‑3356361                                                                                                         GTAGACCCGCCCCTGCTGCATGTACAGCAGGCACTGGTGTTCGAGCAGATCTCCAGGCGCTTGGACGGTGCCTTGCCTCGCCCGAGTACCTGGCGCGGCAAGG  >  1:363207/1‑103 GTAGACCCGCCCCTGCTGCATGTACAGCAGGCACTGGTGTTCGAGCAGATCTCCAGGCGCTTGGACGGTGCCTTGCCTCGCCCGAGTACCTGGCGCGGCAAGG  <  2:363207/103‑1                  GCATGTACAGCAGGCACTGGTGTTCGAGCAGATCTCCAGGCGCTTGGACGGTGCCTTGCCTCGCCCGAGTACCTGGCGCGGCAAG   >  1:23937/1‑85                  GCATGTACAGCAGGCACTGGTGTTCGAGCAGATCTCCAGGCGCTTGGACGGTGCCTTGCCTCGCCCGAGTACCTGGCGCGGCAAG   <  2:23937/85‑1                                                                                                         GTAGACCCGCCCCTGCTGCATGTACAGCAGGCACTGGTGTTCGAGCAGATCTCCAGGCGCTTGGACGGTGCCTTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3356291‑3356367 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccTCGCCCGAGTACCTGGCGCGGCAAGG  <  NC_002947/3356386‑3356361

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.