New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3356367 | 11 (0.680) | 4 (0.250) | 4/250 | NT | 26.0% | coding (524/891 nt) | PP_2952 | LysR family transcriptional regulator |
? | NC_002947 | = 3356386 | 12 (0.760) | coding (505/891 nt) | PP_2952 | LysR family transcriptional regulator |
GTAGACCCGCCCCTGCTGCATGTACAGCAGGCACTGGTGTTCGAGCAGATCTCCAGGCGCTTGGACGGTGCCTTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3356291‑3356367 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccTCGCCCGAGTACCTGGCGCGGCAAGG < NC_002947/3356386‑3356361 GTAGACCCGCCCCTGCTGCATGTACAGCAGGCACTGGTGTTCGAGCAGATCTCCAGGCGCTTGGACGGTGCCTTGCCTCGCCCGAGTACCTGGCGCGGCAAGG > 1:363207/1‑103 GTAGACCCGCCCCTGCTGCATGTACAGCAGGCACTGGTGTTCGAGCAGATCTCCAGGCGCTTGGACGGTGCCTTGCCTCGCCCGAGTACCTGGCGCGGCAAGG < 2:363207/103‑1 GCATGTACAGCAGGCACTGGTGTTCGAGCAGATCTCCAGGCGCTTGGACGGTGCCTTGCCTCGCCCGAGTACCTGGCGCGGCAAG > 1:23937/1‑85 GCATGTACAGCAGGCACTGGTGTTCGAGCAGATCTCCAGGCGCTTGGACGGTGCCTTGCCTCGCCCGAGTACCTGGCGCGGCAAG < 2:23937/85‑1 GTAGACCCGCCCCTGCTGCATGTACAGCAGGCACTGGTGTTCGAGCAGATCTCCAGGCGCTTGGACGGTGCCTTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3356291‑3356367 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccTCGCCCGAGTACCTGGCGCGGCAAGG < NC_002947/3356386‑3356361 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |