New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5665145 | 20 (1.240) | 4 (0.270) | 4/238 | NT | 16.5% | coding (611/834 nt) | PP_4973 | membrane protein |
? | NC_002947 | = 5665165 | 22 (1.460) | coding (591/834 nt) | PP_4973 | membrane protein |
GGTTCTTTGAGGTAGCGCATGCCCAGCAGCACCACCAGGATCACGCTCAACTCCCGCAGTGCCGCCGCTTCGGCCACTGACCCCAGGTGCATGGCCCACAGCACCAGGGCATAGCTGAACAATACGCAGAACCCTACCGCCAACCCAAGGCGCCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5664989‑5665145 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgccattCGTACTGTTCTGGCGAACCCAATGGCGCCTTGGGTTGGCGGTAGGGTTCTGCGTATTGTTCAGCTATGCCCTGGTGCTGTGGGCCATGCACCTGGGGTCAGTGGCCGAAGCGGCGGCACTGCGGGAGTTGAGCGTGATCCTGGTG < NC_002947/5665165‑5665021 GGTTCTTTGAGGTAGCGCATGCCCAGCAGCACCACCAGGATCACGCTCAACTCCCGCAGTGCCGCCGCTTCGGCCACTGACCCCAGGTGCATGGCCCACAGCACCAGGGCATAGCTGAACAATACGCAGAACCCTACCGCCAACCCAAGG < 1:435727/150‑1 GTTCTTTGAGGTAGCGCATGCCCAGCAGCACCACCAGGATCACGCTCAACTCCCGCAGTGCCGCCGCTTCGGCCACTGACCCCAGGTGCATGGCCCACAGCACCAGGGCATAGCTGAACAATACGCAGAACCCTACCGCCAACCCAAGGC > 1:341923/1‑150 CGCAGTGCCGCCGCTTCGGCCACTGACCCCAGGTGCATGGCCCACAGCACCAGGGCATAGCTGAACAATACGCAGAACCCTACCGCCAACCCAAGGCGCCATTCGTACTGTTCTGGCGAACCCAATGGCGCCTTGGGTT > 1:249436/1‑139 CGCAGTGCCGCCGCTTCGGCCACTGACCCCAGGTGCATGGCCCACAGCACCAGGGCATAGCTGAACAATACGCAGAACCCTACCGCCAACCCAAGGCGCCATTCGTACTGTTCTGGCGAACCCAATGGCGCCTTGGGTT < 2:249436/139‑1 CCAGGTGCATGGCCCACAGCACCAGGGCATAGCTGAACAATACGCAGAACCCTACCGCCAACCCAAGGCGCCATTCGTACTGTTCTGGCGAACCCAATGGCGCCTTGGGT > 1:214100/1‑110 CCAGGTGCATGGCCCACAGCACCAGGGCATAGCTGAACAATACGCAGAACCCTACCGCCAACCCAAGGCGCCATTCGTACTGTTCTGGCGAACCCAATGGCGCCTTGGGT < 2:214100/110‑1 CCATTCGTACTGTTCTGGCGAACCCAATGGCGCCTTGGGTTGGCGGTAGGGTTCTGCGTATTGTTCAGCTATGCCCTGGTGCTGTGGGCCATGCACCTGGGGTCAGTGGCCGAAGCGGCGGCACTGCGGGAGTTGAGCGTGATCCTGGTG < 2:193101/150‑1 GGTTCTTTGAGGTAGCGCATGCCCAGCAGCACCACCAGGATCACGCTCAACTCCCGCAGTGCCGCCGCTTCGGCCACTGACCCCAGGTGCATGGCCCACAGCACCAGGGCATAGCTGAACAATACGCAGAACCCTACCGCCAACCCAAGGCGCCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5664989‑5665145 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgccattCGTACTGTTCTGGCGAACCCAATGGCGCCTTGGGTTGGCGGTAGGGTTCTGCGTATTGTTCAGCTATGCCCTGGTGCTGTGGGCCATGCACCTGGGGTCAGTGGCCGAAGCGGCGGCACTGCGGGAGTTGAGCGTGATCCTGGTG < NC_002947/5665165‑5665021 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |