New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5665145 | 20 (1.240) | 4 (0.270) | 4/238 | NT | 16.5% | coding (611/834 nt) | PP_4973 | membrane protein |
? | NC_002947 | = 5665165 | 22 (1.460) | coding (591/834 nt) | PP_4973 | membrane protein |
CACCAGGATCACGCTCAACTCCCGCAGTGCCGCCGCTTCGGCCACTGACCCCAGGTGCATGGCCCACAGCACCAGGG‑CATAGCTGAACAATACGCAGAACCCTACCGCCAACCCAAGGCGCCATTGGGTTCGCCAGAACAGTACGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAATTGCCAGGCGCTGAGCAGGGTCAGCCAGACCAGGTAATCCCACGGTTTGCCCCACAGGCGCACGGCCTGCCCGTCGAACCAGGTGTAGCAACCAATGCACAGGCCAATCAA > NC_002947/5665021‑5665314 | caccaGGATCACGCTCAACTCCCGCAGTGCCGCCGCTTCGGCCACTGACCCCAGGTGCATGGCCCACAGCACCAGGG‑CATAGCTGAACAATACGCAGAACCCTACCGCCAACCCAAGGCGCCATTGGGTTCGCCAGAACAGTACGaatgg < 2:193101‑M2/150‑6 (MQ=255) gATCACGCTCAACTCCCGCAGTGCCGCCGCTTCGGCCACTGACCCCAGGTGCATGGCCCACAGCACCAGGG‑CATAGCTGAACAATACGCAGAACCCTACCGCCAACCCAAGGCGCCATTGGGTTCGCCAGAACAGTACGAATGGcgcccg > 2:96807/1‑150 (MQ=255) gCTCAACTCCCGCAGTGCCGCCGCTTCGGCCACTGACCCCAGGTGCATGGCCCACAGCACCAGGG‑CATAGCTGAACAATACGCAGAACCCTACCGCCAACCCAAGGCGCCATTGGGTTCGCCAGAACAGTACGAATGGCGCCCGCCgcgc > 2:12599/1‑150 (MQ=255) ggCCACTGACCCCAGGTGCATGGCCCACAGCACCAGGG‑CATAGCTGAACAATACGCAGAACCCTACCGCCAACCCAAGGCGCCATTGGGTTCGCCAGAACAGTACGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAAtt > 2:217924/1‑146 (MQ=255) ggCCACTGACCCCAGGTGCATGGCCCACAGCACCAGGG‑CATAGCTGAACAATACGCAGAACCCTACCGCCAACCCAAGGCGCCATTGGGTTCGCCAGAACAGTACGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAAtt < 1:217924/146‑1 (MQ=255) aCCCCAGGTGCATGGCCCACAGCACCAGGGACATGGGTG‑TGGATGCGCAGAACCCTACCGCCAACCCAAGGCGCCATTGGGTTCGCCAGAACAGTACGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAATTGCCAGGCGCTGa > 1:308163/1‑150 (MQ=255) ccccAGGTGCATGGCCCACAGCACCAGGG‑CATAGCTGAACAATACGCAGAACCCTACCGCCAACCCAAGGCGCCATTGGGTTCGCCAGAACAGTACGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAATTGCCAGGCGCTGAg > 1:149692/1‑150 (MQ=255) tGGCCGACAGCCAGAGGG‑CATAGCTGAACAACACGCAGAACCCTACGGACAACCCAAAGCGGCAGTGGGTCCGCCAGAACAGTACGAATGGCGCCCGCAGCGCTACGCTCGGGAACAACGGGAGTTGACAGGCGCTGAGCAGGGTCAGcc > 2:113774/1‑150 (MQ=255) aTACGCAGAACCCTACCGCCAACCCAAGGCGCCATTGGGTTCGCCAGAACAGTACGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAATTGCCGGGCGCTGAGCAGGGTCAGCCAGACCAGGTAATCCCACGGTTTGCCCcaca < 1:193101/150‑1 (MQ=255) aCGCAGAACCCTACCGCCAACCCAAGGCGCCATTGGGTTCGCCAGAACAGTACGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAATTGCCAGGCGCTGAGCAGGGTCAGCCAGACCAGGTAATCCCACGGTTTGCCCCACAgg < 1:96807/150‑1 (MQ=255) aCGCAGAACCCTACCGCCAACCCAAGGCGCCATTGGGTTCGCCAGAACAGTACGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAATTGCCAGGCGCTGAGCAGGGTCAGCCAGACCAGGTAATCCCACGCTTTGCCCCACAgg > 1:133555/1‑150 (MQ=255) gCAGAACCCTACCGCCAACCCAAGGCGCCATTGGGTTCGCCAGAACAGTACGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAATTGCCAGGCGCTGAGCa > 2:259654/1‑107 (MQ=255) gCAGAACCCTACCGCCAACCCAAGGCGCCATTGGGTTCGCCAGAACAGTACGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAATTGCCAGGCGCTGAGCa < 1:259654/107‑1 (MQ=255) cccTACCGCCAACCCAAGGCGCCATTGGGTTCGCCAGAACAGTACGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAATTGCCAGGCGCTGAGCAGGGTCAGCCAGACCAGGTAATCCCACGGTTTGCCCCACAGGCGCACGGc > 2:239569/1‑150 (MQ=255) gCCAACCCAAGGCGCCATTGGGTTCGCCAGAACAGTACGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAATTGCCAGGCGCTGAGCAGGGTCAGCCAGACCAGGTAATCCCACGGTTTGCCCCACAGGCGCACGGCCTGCCCg > 1:86552/1‑150 (MQ=255) ccAACCCAAGGCGCCATTGGGTTCGCCAGAACAGTACGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAATTGCCAGGCGCTGAGCAGGGTCAGCCAGACCAGGTAATCCCACGGTTTGCCCCACAGGCGCACGGCCTGCCCGt > 1:402756/1‑150 (MQ=255) cAACCCAAGGCGCCATTGGGTTCGCCAGAACAGTACGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAATTGCCAGGCGCTGAGCAGGGTCAGCCAGACCAGGTAATCCCACGGTTTGCCCCACAGGCGCACGGCCTGCCCGTc < 2:402756/150‑1 (MQ=255) aaCCCAAGGCGCCATTGGGTTCGCCAGAACAGTACGaatggcgccttgggttggcggtagggttctgcgtattgttcagctatgccctggtgctgtgggccatgcacctggggtcagtggccgaagcggcggcactgcg < 2:249436‑M2/139‑104 (MQ=255) aaCCCAAGGCGCCATTGGGTTCGCCAGAACAGTACGaatggcgccttgggttggcggtagggttctgcgtattgttcagctatgccctggtgctgtgggccatgcacctggggtcagtggccgaagcggcggcactgcg > 1:249436‑M2/1‑36 (MQ=255) aCCCAAGGCGCCATTGGGTTCGCCAGAACAGTACGaatggcgccttgggttggcggtagggttctgcgtattgttcagctatgccctggtgctgtgggccatgcacctgg < 2:214100‑M2/110‑76 (MQ=255) aCCCAAGGCGCCATTGGGTTCGCCAGAACAGTACGaatggcgccttgggttggcggtagggttctgcgtattgttcagctatgccctggtgctgtgggccatgcacctgg > 1:214100‑M2/1‑35 (MQ=255) aaGGCGCCATTGGGTTCGCCAGAACAGTACGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAATTGCCAGGCGCTGAGCAGGGTCAGCCAGACCAGGTAATCCCACGGTTTGCCCCACAGGCGCACGGCCTGCCCGTCGAACCa > 1:381425/1‑150 (MQ=255) gcgcCATTGGGTTCGCCAGAACAGTACGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAATTGCCAGGCGCTGAGCAGGGTCAGCCAGACCAGGTAATCCCACGGTTTGCCCCACAGGCGCACGGCCTGCCCGTCGAACCAGgt > 2:100079/1‑150 (MQ=255) ccATTGGGTTCGCCAGAACAGTACGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAATTGCCAGGCGCTGAGCAGGGTCAGCCAGACCAGGTAATCCCACGGTTTGCCCCACAGGCGCACGGCCTGCCCGTCGAACCAGGTGTa < 1:239569/150‑1 (MQ=255) ccATTGGGTTCGCCAGAACAGTACGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAATTGCCAGGCGCTGAGCAGGGTCAGCCAGACCAGGTAATCCCACGGTTTGCCCCACAGGCGCACGGCCTGCCCGTCGAACCAGGTGTa < 1:12599/150‑1 (MQ=255) cAGAACAGTACGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAATTGCCAGGCGCTGAGCAGGGTCAGCCAGACCAGGTAATCCCACGGTTTGCCCCACAGGCGCACGGCCTGCCCGTCGAACCAGGTGTAGCAACCAATGcac > 1:162259/1‑150 (MQ=255) aCAGTACGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAATTGCCAGGCGCTGAGCAGGGTCAGCCAGAc > 1:96364/1‑76 (MQ=255) aCAGTACGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAATTGCCAGGCGCTGAGCAGGGTCAGCCAGAc < 2:96364/76‑1 (MQ=255) cGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAATTGCCAGGCGCTGAGCAGGGTCAGCCAGACCAGGTAATCCCACGGTTTGCCCCACAGGCGCACGGCCTGCCCGTCGaa < 1:439507/118‑1 (MQ=255) cGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAATTGCCAGGCGCTGAGCAGGGTCAGCCAGACCAGGTAATCCCACGGTTTGCCCCACAGGCGCACGGCCTGCCCGTCGaa > 2:439507/1‑118 (MQ=255) gAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAATTGCCAGGCGCTGAGCAGGGTCAGCCAGACCAGGTAATCCCACGGTTTGCCCCACAGGCGCACGGCCTGCCCGTCGAACCAGGTGTAGCAACCAATGCACAGGCCAATCaa > 2:365634/1‑150 (MQ=255) | CACCAGGATCACGCTCAACTCCCGCAGTGCCGCCGCTTCGGCCACTGACCCCAGGTGCATGGCCCACAGCACCAGGG‑CATAGCTGAACAATACGCAGAACCCTACCGCCAACCCAAGGCGCCATTGGGTTCGCCAGAACAGTACGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAATTGCCAGGCGCTGAGCAGGGTCAGCCAGACCAGGTAATCCCACGGTTTGCCCCACAGGCGCACGGCCTGCCCGTCGAACCAGGTGTAGCAACCAATGCACAGGCCAATCAA > NC_002947/5665021‑5665314 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |