New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 6032808 = | 16 (0.990) | 7 (0.580) | 7/190 | NT | 52.1% | intergenic (+16/+120) | dppA‑IV/PP_5284 | dipeptide transport protein/hypothetical protein |
? | NC_002947 | 6032890 = | 1 (0.080) | intergenic (+98/+38) | dppA‑IV/PP_5284 | dipeptide transport protein/hypothetical protein |
TTGGTGATGGGGAGCCGTTGTCGATGGTCGAGCATGGGTGGATTGTGGTCTGAGGGAGTACTGAGAGCCTTATAGGGTCAGTACGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGTCA‑ACTGCCAGGCTGGCGCTACCCCTGTAGGAGCGGGTTTACCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6032980‑6032808 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctacccctgtaggagcgggtttacccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGCCCCCGCTTC > NC_002947/6032890‑6033030 TTGGTGATGGGGAGCCGTTGTCGATGGTCGAGCATGGGTGGATTGTGGTCTGAGGGAGTACTGAGAGCCTTATAGGGTCAGTACGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGTCA‑ACTGCCAGGCTGGCGCTACCCCT > 1:194986/1‑150 GTGATGGGGAGCCGTTGTCGATGGTCGAGCATGGGTGGATTGTGGTCTGAGGGAGTACTGAGAGCCTTATAGGGTCAGTACGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGTCA‑ACTGCCAGGCTGGCGCTACCCCTGTA < 2:194986/150‑1 GTGATGGGGAGCCGTTGTCGATGGTCGAGCATGGGTGGATTGTGGTCTGAGGGAGTACTGAGAGCCTTATAGGGTCAGTACGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCA‑GTTGACGCTACCCCTGTA < 1:399500/150‑1 GAGTACTGAGAGCCTTATAGGGTCAGTACGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGTCA‑ACTGCCAGGCTGGCGCTACCCCTGTA < 1:130958/98‑1 GAGTACTGAGAGCCTTATAGGGTCAGTACGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGTCA‑ACTGCCAGGCTGGCGCTACCCCTGTA > 2:130958/1‑98 CTGAGAGCCTTATAGGGTCAGTACGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGTCA‑ACTGCCAGGCTGGCGCTACCCATGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGACCCTATAAGGCTCTCAGTACTCC > 1:147097/1‑150 CTACAGGGGTAGCGTCA‑ACTGCCAGGCTGGCGCTACCCATGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCA < 2:147097/150‑1 ACAGGGGTAGCGTCA‑ACTGCCAGGCTGGCGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACC < 2:399500/150‑1 TAGCGTCA‑ACTGCCAGGCTGGCGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGT < 1:310266/86‑1 TAGCGTCA‑ACTGCCAGGCTGGCGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGT > 2:310266/1‑86 TAGCGTCA‑ACTGCCAGGCTGGCGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAA > 1:26297/1‑76 TAGCGTCA‑ACTGCCAGGCTGGCGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAA < 2:26297/76‑1 CCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATC > 2:75537/1‑150 CCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCT < 1:196992/65‑1 CCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCT > 2:196992/1‑65 CCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGCCCCCGCTTC > 1:290652/1‑148 CCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGCCCCCGCTTC < 2:290652/148‑1 TTGGTGATGGGGAGCCGTTGTCGATGGTCGAGCATGGGTGGATTGTGGTCTGAGGGAGTACTGAGAGCCTTATAGGGTCAGTACGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGTCA‑ACTGCCAGGCTGGCGCTACCCCTGTAGGAGCGGGTTTACCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6032980‑6032808 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctacccctgtaggagcgggtttacccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGCCCCCGCTTC > NC_002947/6032890‑6033030 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |