New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 6174834 = | 29 (1.790) | 4 (0.260) | 4/248 | NT | 13.1% | coding (399/420 nt) | atpC | ATP synthase subunit epsilon |
? | NC_002947 | 6174870 = | 25 (1.590) | coding (363/420 nt) | atpC | ATP synthase subunit epsilon |
CGTGCAACGTGCTGCAGACCTGGATGAAGCTCAGGCTCAGGAGGCCCTCAAGGCTGCCGAGAACGCCCTGAATCTGAAAGGCGCGGACTTCGACTACGGCGCCGCCGCCGCACGTCTGGCCGAGGCCGCAGCCCAGCTGCGTACCGTCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6174984‑6174834 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagACGTGCGGCGGCGGCGCCGTAGTCGAAGTCCGCGCCTTTCAGA > NC_002947/6174870‑6174912 CGTGCAACGTGCTGCAGACCTGGATGAAGCTCAGGCTCAGGAGGCCCTCAAGGCTGCCGAGAACGCCCTGAATCTGAAAGGCGCGGACTTCGACTACGGCGCCGCCGCCGCACGTCTGGCCGAGGCCGCAGCCCAGCTGCGTACCGTCCA < 1:17206/150‑1 CCGAGAACGCCCTGAATCTGAAAGGCGCGGACTTCGACTACGGCGCCGCCGCCGCACGTCTGGCCGAGGCCGCAGCCCAGCTGCGTACCGTCCA < 1:113892/94‑1 CCGAGAACGCCCTGAATCTGAAAGGCGCGGACTTCGACTACGGCGCCGCCGCCGCACGTCTGGCCGAGGCCGCAGCCCAGCTGCGTACCGTCCA > 2:113892/1‑94 GCCGCACGTCTGGCCGAGGCCGCAGCCCAGCTGCGTCCCTGCCAGACGTGCGGCGGCGGCGCCGTAGTCGAAGTCCGCGCCTTTCAGA < 1:234930/88‑1 GCCGCACGTCTGGCCGAGGCCGCAGCCCAGCTGCGTACCGTCCAGACGTGCGGCGGCGGCGCCGTAGTCGAAGTCCGCGCCTTTCAGA > 2:234930/1‑88 GGCCGCAGCCCAGCTGCGTACCGTCCAGACGTGCGGCGGCGGCGCCG > 1:301510/1‑47 GGCCGCAGCCCAGCTGCGTACCGTCCAGACGTGCGGCGGCGGCGCCG < 2:301510/47‑1 CGTGCAACGTGCTGCAGACCTGGATGAAGCTCAGGCTCAGGAGGCCCTCAAGGCTGCCGAGAACGCCCTGAATCTGAAAGGCGCGGACTTCGACTACGGCGCCGCCGCCGCACGTCTGGCCGAGGCCGCAGCCCAGCTGCGTACCGTCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6174984‑6174834 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagACGTGCGGCGGCGGCGCCGTAGTCGAAGTCCGCGCCTTTCAGA > NC_002947/6174870‑6174912 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |