New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 836205 = | 22 (1.140) | 9 (0.510) | 6/236 | NT | 35.9% | intergenic (‑124/+53) | PP_0718/ychF | sulfate transporter/ribosome‑associated potassium‑dependent ATP/GTPase |
? | NC_002947 | 836237 = | 12 (0.680) | intergenic (‑156/+21) | PP_0718/ychF | sulfate transporter/ribosome‑associated potassium‑dependent ATP/GTPase |
TTCAAGGGTGAAGCCGGTGCCAAGGAAGCCGGTAAGTGGCGTCTGGAAGGCAAAGACTACATCGTCAAAGACGGCGACGTGATGCACTTCCGCTTTAACGTCTAAGCGGTAACCTGCAGCACACACAAACCCCTTGAGGCTTGCGCTTCAAGGGGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/836362‑836205 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaaggggtttGTGTGTGCTGCAGGTTACCGCTTAGACGTTAAAGCGGAAGTGCATCACGTCGCCGTCTTTGACGATGTAGTCTTTGCCTTCCAGACGCCACTTACCGGCTTCCTTGGCACCGGCTTCACCCTTGAACTGGA > NC_002947/836237‑836367 TTCAAGGGTGAAGCCGGTGCCAAGGAAGCCGGTAAGTGGCGTCTGGAAGGCAAAGACTACATCGTCAAAGACGGCGACGTGATGCACTTCCGCTTTAACGTCTAAGCGGTAACCTGCAGCACACACAAACCCCTTGAGGCTTGCGCTTCA > 2:334184/1‑150 GGGTGAAGCCGGTGCCAAGGAAGCCGGTAAGTGGCGTCTGGAAGGCAAAGACTACATCGTCAAAGACGGCGACGTGATGCACTTCCGCTTTAACGACTAAGCGGTAACCTGCAGCACACACAAACCCCTTGAGGCTTGCGCTTCAAGGGG > 2:307247/1‑150 CAAGGAAGCCGGTAAGTGGCGTCTGGAAGGCAAAGACTACATCGTCAAAGACGGCGACGTGATGCACTTCCGCTTTAACGTCTAAGCGGTAACCTGCAGCACACACAAACCCCTTGAAGCGCAAGCCTCAAGGGGTTTGTGTGTGCTGCA < 2:27077/150‑1 ACCCCTTGAGGCTTGCGCTTCAAGGGGTTTGTGTGTGCTGCAGGTTACCGCTTAGACGTTAAAGCGGAAGTGCATCACGTCGCCGTCTTTGACGATGTAGTCTTTGCCTTCCAGACGCCACTTACCGGCTTCCTTGGCACCGGCTTCACC > 1:451374/1‑150 CCTTGAGGCTTGCGCTTCAAGGGGTTTGTGTGTGCTGCAGGTTACCGCTTAGACGTTAAA > 1:261391/1‑60 CCTTGAGGCTTGCGCTTCAAGGGGTTTGTGTGTGCTGCAGGTTACCGCTTAGACGTTAAA > 1:384255/1‑60 CCTTGAGGCTTGCGCTTCAAGGGGTTTGTGTGTGCTGCAGGTTACCGCTTAGACGTTAAA < 2:261391/60‑1 CCTTGAGGCTTGCGCTTCAAGGGGTTTGTGTGTGCTGCAGGTTACCGCTTAGACGTTAAA < 2:384255/60‑1 CTTGAGGCTTGCGCTTCAAGGGGTTTGTGTGTGCTGCAGGTTACCGCTTAGACGTTAAAGCGGAAGTGCATCACGTCGCCGTCTTTGACGATGTAGTCTTTGCCTTCCAGACGCCACTTACCGGCTTCCTTGGCACCGGCTTCACCCTTG > 1:189335/1‑150 CTTGCGCTTCAAGGGGTTTGTGTGTGCTGCAGGTTACCGCTTAGACGTTAAAGCGGAAGTGCATCACGTCGCCGTCTTTGACGATGTAGTCTTTGCCTTCCAGACGCCACTTACCGGCTTCCTTGGCACCGGCTTCACCCTTGAACTGGA < 1:27077/150‑1 CTTGCGCTTCAAGGGGTTTGTGTGTGCTGCAGGTTACCGCTTAGACGTTAAAGCGGAAGTGCATCACGTCGCCGTCTTTGACGATGTAGTCTTTGCCTTCCAGACGCCACTTACCGGCTTCCTTGGCACCGGCTTCACCCTTGAACTGGA < 2:451374/150‑1 TTCAAGGGTGAAGCCGGTGCCAAGGAAGCCGGTAAGTGGCGTCTGGAAGGCAAAGACTACATCGTCAAAGACGGCGACGTGATGCACTTCCGCTTTAACGTCTAAGCGGTAACCTGCAGCACACACAAACCCCTTGAGGCTTGCGCTTCAAGGGGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/836362‑836205 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaaggggtttGTGTGTGCTGCAGGTTACCGCTTAGACGTTAAAGCGGAAGTGCATCACGTCGCCGTCTTTGACGATGTAGTCTTTGCCTTCCAGACGCCACTTACCGGCTTCCTTGGCACCGGCTTCACCCTTGAACTGGA > NC_002947/836237‑836367 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |