New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 836205 = | 22 (1.140) | 9 (0.510) | 6/236 | NT | 35.9% | intergenic (‑124/+53) | PP_0718/ychF | sulfate transporter/ribosome‑associated potassium‑dependent ATP/GTPase |
? | NC_002947 | 836237 = | 12 (0.680) | intergenic (‑156/+21) | PP_0718/ychF | sulfate transporter/ribosome‑associated potassium‑dependent ATP/GTPase |
CTCTGGGCGAGAAGGGCGCTGAACCTCAGCTTAGATGCTGAAGGCGGGGGCCGCTTTGCGGCCTGGCACGACGCAAGGCCGCCCCTGCCAAGGGCGCGCATGTCTGGGCAAAACAAAACCCCTTGAAGCGCAAGCCTCAAGGGGTTTGTGTGTGCTGCAGGTTACCGCTTAGACGTTAAAGCGGAAGTGCATCACGTCGCCGTCTTTGACGATGTAGTCTTTGCCTTCCAGACGCCACTTACCGGCTTCCTTGGCACCGGCTTCACCCTTGAACTGGATGAAGTCGTCATAGGCCAC > NC_002947/836090‑836386 | ctctGGGCGAGAAGGGCGCTGAACCTCAGCTTAGATGCTGAAGGCGGGGGCCGCTTTGCGGCCTGGCACGACGCAAGGCCGCCCCTGCCAAGGGCGCGCATGTCTGGGCAAAACAAAACCCCTTGAAGCGCAAGCCTCAAGGGGTTtgtg > 1:68398/1‑150 (MQ=255) tctGGGCGAGAAGGGCGCTGAACCTCAGCTTAGATGCTGAAGGCGGGGGCCGCTTTGCGGCCTGGCACGACGCAAGGCCGCCCCTGCCAAGGGCGCGCATGTCTGGGCAAAACAAAACCCCTTGAAGCGCAAGCCTCAAGGGGTTtgtgt > 1:122402/1‑150 (MQ=255) tGGGCGAGAAGGGCGCTGAACCTCAGCTTAGATGCTGAAGGCGGGGGCCGCTTTGCGGCCTGGCACGACGCAAGGCCGCCCCTGCCAAGGGCGCGCATGTCTGGGCAAAACAAAACCCCTTGAAGCGCAAGCCTCAAGGGGTTtgtgt > 2:416106/1‑148 (MQ=255) tGGGCGAGAAGGGCGCTGAACCTCAGCTTAGATGCTGAAGGCGGGGGCCGCTTTGCGGCCTGGCACGACGCAAGGCCGCCCCTGCCAAGGGCGCGCATGTCTGGGCAAAACAAAACCCCTTGAAGCGCAAGCCTCAAGGGGTTtgtgt < 1:416106/148‑1 (MQ=255) caaggaagccggtaagtggcgtctggaaggcaaagactacatcgtcaaagacggcgacgtgatgcacttccgctttaacgtctaagcggtaacctgcagcacacacaaaccccttgaagcgcaagcctcaaggggtttGTGTGTGCTGCa < 2:27077‑M2/12‑1 (MQ=255) agaAGGGCGCTGAACCTCAGCTTAGATGCTGAAGGCGGGGGCCGCTTTGCAGCCTGGCACCGCGCAAGACCGCCCCTGCCAAGGGCGCGCATGTCTGGGCAAAACAAAACCCCTTGAAGCGCAAGCCTCAAGGGGTTTGTGTGTGCTGCa < 1:182392/150‑1 (MQ=255) cTGAACCTCAGCTTAGATGCTGAAGGCGGGGGCCGCTTTGCGGCCTGGCACGACGCAAGGCCGCCCCTGCCAAGGGCGCGCATGTCTGGGCAAAACAAAACCCCTTGAAGCGCAAGCCTCAAGGGGTTTGTGTGTGCTGCAGGTTACCGc < 2:122402/150‑1 (MQ=255) tGAACCTCAGCTTAGATGCTGAAGGCGGGGGCCGCTTTGCGGCCTGGCACGACGCAAGGCCGCCCCTGCCAAGGGCGCGCATGTCTGGGCAAAACAAAACCCCTTGAAGCGCAAGCCTCAAGGGGTTTGTGTGTGCTGCAGGTTACCGCt > 1:307247/1‑150 (MQ=255) cTCAGCTTAGATGCTGAAGGCGGGGGCCGCTTTGCGGCCTGGCACGACGCAAGGCCGCCCCTGCCAAGGGCGCGCATGTCTGGGCAAAACAAAACCCCTTGAAGCGCAAGCCTCAAGGGGTTTGTGTGTGCTGCAGGTTACCGCTTAGAc > 1:77632/1‑150 (MQ=255) cAGCTTAGATGCTGAAGGCGGGGGCCGCTTTGCGGCCTGGCACGACGCAAGGCCGCCCCTGCCAAGGGCGCGCATGTCTGGGCAAAACAAAACCCCTTGAAGCGCAAGCCTCAAGGGGTTTGTGTGTGCTGCAGGTTACCGCTTAGACGt < 2:121389/150‑1 (MQ=255) cTTAGATGCTGAAGGCGGGGGCCGCTTTGCGGCCTGGCACGACGCAAGGCCGCCCCTGCCAAGGGCGCGCATGTCTGGGCAAAACAAAACCCCTTGAAGCGCAAGCCTCAAGGGGTTTGTGTGTGCTGCAGGTTACCGCTTAGACGtt > 2:110612/1‑148 (MQ=255) cTTAGATGCTGAAGGCGGGGGCCGCTTTGCGGCCTGGCACGACGCAAGGCCGCCCCTGCCAAGGGCGCGCATGTCTGGGCAAAACAAAACCCCTTGAAGCGCAAGCCTCAAGGGGTTTGTGTGTGCTGCAGGTTACCGCTTAGACGtt < 1:110612/148‑1 (MQ=255) aTGCTGAAGGCGGGGGCCGCTTTGCGGCCTGGCACGACGCAAGGCCGCCCCTGCCAAGGGCGCGCATGTCTGGGCAAAACAAAACCCCTTGAAGCGCAAGCCTCAAGGGGTTTGTGTGTGCTGCAGGTTACCGCTTAGACGTTAAAGCga < 2:77632/150‑2 (MQ=255) gCAAGGCCGCCCCTGCCAAGGGCGCGCATGTCTGGGCAAAACAAAACCCCTTGAAGCGCAAGCCTCAAGGGGTTTGTGTGTGCTGCAGGTTACCGCTTAGACGTTAAAGCGGAAGTGCATCACGTCGCCGTCTTTGACGATGTAGTCttt > 1:76991/1‑150 (MQ=255) gCAAGGCCGCCCCTGCCAAGGGCGCGCATGTCTGGGCAAAACAAAACCCCTTGAAGCGCAAGCCTCAAGGGGTTTGTGTGTGCTGC‑GGTTACCGCTTAGACGTTAAAGCGGAAGTGCATCACGTCGCCGTCTTTGACGATGTAGTCTTTg > 1:368904/1‑150 (MQ=255) tgcagcacacacAAACCCCTTGAGGCTTGCGCTTCAAGGGGTTTGTGTGTGCTGCAGGTTACCGCTTAGACGTTAAAGCGGAAGTGCATCACGTCGCCGTCTTTGACGATGTAGTCTTTGCCTTCCAGACGCCACTTACCGGCTTCCTTg < 2:27077‑M1/138‑1 (MQ=255) ggCAAAACAAAACCCCTTGAAGCGCAAGCCTCAAGGGGTTTGTGTGTGCTGCAGGTTACCGCTTAGACGt > 1:303761/1‑70 (MQ=255) ggCAAAACAAAACCCCTTGAAGCGCAAGCCTCAAGGGGTTTGTGTGTGCTGCAGGTTACCGCTTAGACGt < 2:303761/70‑1 (MQ=255) accccttgaggcttgcgcttcaaggggtttGTGTGTGCTGCAGGTTACCGCTTAGACGTTAAAGCGGAAGTGCATCACGTCGCCGTCTTTGACGATGTAGTCTTTGCCTTCCAGACGCCACTTACCGGCTTCCTTGGCACCGGCTTCAcc > 1:451374‑M2/31‑150 (MQ=255) CCCCTTGAAGCGCAAGCCTCAAGGGGTTTGTGTGTGCTGCAGGTTACCGCTTAGTCGTTAAAGCGGAAGTGCATCACGTCGCCGTCTTTGACGATGTAGTCTTTGCCTTCCAGACGCCACTTACCGGCTTCCTTGGCACCGGCTTCAccc > 2:307247‑M1/1‑150 (MQ=255) ccttgaggcttgcgcttcaaggggtttGTGTGTGCTGCAGGTTACCGCTTAGACGTTaaa < 2:261391‑M2/33‑1 (MQ=255) ccttgaggcttgcgcttcaaggggtttGTGTGTGCTGCAGGTTACCGCTTAGACGTTaaa > 1:261391‑M2/28‑60 (MQ=255) ccttgaggcttgcgcttcaaggggtttGTGTGTGCTGCAGGTTACCGCTTAGACGTTaaa < 2:384255‑M2/33‑1 (MQ=255) ccttgaggcttgcgcttcaaggggtttGTGTGTGCTGCAGGTTACCGCTTAGACGTTaaa > 1:384255‑M2/28‑60 (MQ=255) cttgaggcttgcgcttcaaggggtttGTGTGTGCTGCAGGTTACCGCTTAGACGTTAAAGCGGAAGTGCATCACGTCGCCGTCTTTGACGATGTAGTCTTTGCCTTCCAGACGCCACTTACCGGCTTCCTTGGCACCGGCTTCACCCTTg > 1:189335‑M2/27‑150 (MQ=255) TGAAGCGCAAGCCTCAAGGGGTTTGTGTGTGCTGCAGGTTACCGCTTAGACGTTAAAGCGGAAGTGCATCACGTCGCCGTCTTTGACGATGTAGTCTTTGCCTTCCAGACGCCACTTACCGGCTTCCTTGGCACCGGCTTCACCCTTGaa > 2:334184‑M1/1‑150 (MQ=255) cttgcgcttcaaggggtttGTGTGTGCTGCAGGTTACCGCTTAGACGTTAAAGCGGAAGTGCATCACGTCGCCGTCTTTGACGATGTAGTCTTTGCCTTCCAGACGCCACTTACCGGCTTCCTTGGCACCGGCTTCACCCTTGAACTGGa < 1:27077‑M2/131‑1 (MQ=255) cttgcgcttcaaggggtttGTGTGTGCTGCAGGTTACCGCTTAGACGTTAAAGCGGAAGTGCATCACGTCGCCGTCTTTGACGATGTAGTCTTTGCCTTCCAGACGCCACTTACCGGCTTCCTTGGCACCGGCTTCACCCTTGAACTGGa < 2:451374‑M2/131‑1 (MQ=255) gtgtgtgCTGCAGGTTACCGCTTAGACGTTAAAGCGGAAGTGCATCACGTCGCCGTCTTTGACGATGTAGTCTTTGCCTTCCAGACGCCACTTACCGGCTTCCTTGGCACCGGCTTCACCCTTGAACTGGATGAAGTCGTCATAGGccac < 2:189335/150‑1 (MQ=255) | CTCTGGGCGAGAAGGGCGCTGAACCTCAGCTTAGATGCTGAAGGCGGGGGCCGCTTTGCGGCCTGGCACGACGCAAGGCCGCCCCTGCCAAGGGCGCGCATGTCTGGGCAAAACAAAACCCCTTGAAGCGCAAGCCTCAAGGGGTTTGTGTGTGCTGCAGGTTACCGCTTAGACGTTAAAGCGGAAGTGCATCACGTCGCCGTCTTTGACGATGTAGTCTTTGCCTTCCAGACGCCACTTACCGGCTTCCTTGGCACCGGCTTCACCCTTGAACTGGATGAAGTCGTCATAGGCCAC > NC_002947/836090‑836386 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |