New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3607987 | 18 (0.930) | 4 (0.220) | 4/244 | NT | 17.0% | coding (1173/2265 nt) | PP_3182 | GGDEF domain‑containing protein |
? | NC_002947 | = 3608006 | 22 (1.200) | coding (1154/2265 nt) | PP_3182 | GGDEF domain‑containing protein |
CGACAGCTTCTGCACCAGTTCGTGGACCCAGGCGTTGATCTGCTCCTCGCTGCGCTCACCGGCCAGCAACACCACGAATTCGTCGCCGCCAAACCGCGAAGCCTCGTCGCCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3607873‑3607987 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgggcGTATCCAGCGCCTGCTGGAGCCCGGCGAC < NC_002947/3608006‑3607978 CGACAGCTTCTGCACCAGTTCGTGGACCCAGGCGTTGATCTGCTCCTCGCTGCGCTCACCGGCCAGCAACACCACGAATTCGTCGCCGCCAAACCGCGAAGCCTCGTCGCCGGGCGTATCCAGCGCCTGCTGGAGCCCGGCGAC > 1:202494/1‑144 CGACAGCTTCTGCACCAGTTCGTGGACCCAGGCGTTGATCTGCTCCTCGCTGCGCTCACCGGCCAGCAACACCACGAATTCGTCGCCGCCAAACCGCGAAGCCTCGTCGCCGGGCGTATCCAGCGCCTGCTGGAGCCCGGCGAC < 2:202494/144‑1 TGATCTGCTCCTCGCTGCGCTCACCGGCCAGCAACACCACGAATTCGTCGCCGCCAAACCGCGAAGCCTCGTCGCCGGGCGTATCCAGCGCCTGCTGGAGCCCGGC < 1:121530/106‑1 TGATCTGCTCCTCGCTGCGCTCACCGGCCAGCAACACCACGAATTCGTCGCCGCCAAACCGCGAAGCCTCGTCGCCGGGCGTATCCAGCGCCTGCTGGAGCCCGGC > 2:121530/1‑106 CGACAGCTTCTGCACCAGTTCGTGGACCCAGGCGTTGATCTGCTCCTCGCTGCGCTCACCGGCCAGCAACACCACGAATTCGTCGCCGCCAAACCGCGAAGCCTCGTCGCCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3607873‑3607987 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgggcGTATCCAGCGCCTGCTGGAGCCCGGCGAC < NC_002947/3608006‑3607978 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |