| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3607987 | 18 (0.930) | 4 (0.220) | 4/244 | NT | 17.0% | coding (1173/2265 nt) | PP_3182 | GGDEF domain‑containing protein |
| ? | NC_002947 | = 3608006 | 22 (1.200) | coding (1154/2265 nt) | PP_3182 | GGDEF domain‑containing protein | |||||
GTGGCCGACAGCTTCTGCACCAGTTCGTGGACCCAGGCGTTGATCTGCTCCTCGCTGCGCTCACCGGCCAGCAACACCACGAATTCGTCGCCGCCAAACCGCGAAGCCTCGTCGCCGGGCTCCAGCAGGCGCTGGATACGCCCGGCCACAGCCTGTAGCAGCAGGTCACCAATCTTGTGGCCGAGCGAGTCGTTGATCGACTTGAAACGGTCCATGTCGATGAACAGGATCGCCATCAGTCGGCGCTTGCCACGTTGCCGAGTCAGCACCTGGCTGGCCACT > NC_002947/3607868‑3608149 | gTGGCCGACAGCTTCTGCACCAGTTCGTGGACCCAGGCGTTGATCTGCTCCTCGCTGCGCTCACCGGCCAGCAACACCACGAATTCGTCGCCGCCAAACCGCGAAGCCTCGTCGCCGGGCTCCAGCAGGCGCTGGATACGCCCGGCcaca < 2:454144/150‑1 (MQ=255) cGACAGCTTCTGCACCAGTTCGTGGACCCAGGCGTTGATCTGCTCCTCGCTGCGCTCACCGGCCAGCAACACCGCGAATTCGTCGCCGCCAAACCGCGAAGCCTCGTCGCCGGGCTCCAGCAGGCGCTGGATACGCCCGGCCACAGCCTg > 2:425064/1‑150 (MQ=255) gCTTCTGCACCAGTTCGTGGACCCAGGTGTTGATCTGCTCCTCGCTGCGCTCACCGGCCAGCAACACCACGAATTCGTCGCCGCCAAACCGCGAAGCCTCGTCGCCGGGCTCCAGCAGGCGCTGGATACGCCCGGCCACAGCCTGTagca < 2:51552/150‑1 (MQ=255) cTGCACCAGTTCGTGGACCCAGGCGTTGATCTGCTCCTCGCTGCGCTCACCGGCCAGCAACACCACGAATTCGTCGCCGCCAAACCGCGAAGCCTCGTCGCCGGGCTCCAGCAGGCGCTGGATACGCCCGGCCACAGCCTGTAGcagcag < 2:208978/150‑1 (MQ=255) tGCACCAGTTCGTGGACCCAGGCGTTGATCTGCTCCTCGCTGCGCTCACCGGCCAGCAACACCACGAATTCGTCGCCGCCAAACCGCGAAGCCTCGTCGCCGGGCTCCAGCAGGCGCTGGATACGCCCGGCCACAGCCTGTAGCAGCAgg < 1:425064/150‑1 (MQ=255) ttCGTGGACCCAGGCGTTGAGCTGCTCCTCGCTGCGCTCACCGGCCAGCAACACCACGAATTCGTCGCCGCCAAACCGCGAAGCCTCGTCGCCGGGCTCCAGCAGGCGCTGGATACGCCCGGCCACAGCCTGTAGCAGCAGGTCACCAAt > 2:15878/1‑150 (MQ=255) gATCTGCTCCTCGCTGCGCTCACCGGCCAGCAACACCACGAATTCGTCGCCGCCAAACCGCGAAGCCTCGTCGCCGGGCTCCAGCAGGCGCTGGATACGCCCGGCCACAGCCTGTAGCAGCAGGTCACCAATCTTGTGGCCGAGCGAGTc > 1:114011/1‑150 (MQ=255) tGCTCCTCGCTGCGCTCACCGGCCAGCAACACCACGAATTCGTCGCCGCCAAACCGCGAAGCCTCGTCGCCGGGCTCCAGCAGGCGCTGGATACGCCCGGCCACAGCCTGTAGCAGCAGGTCACCAATCTTGTGGCCGAGCGAGTCGTTg < 2:114011/150‑1 (MQ=255) ctcctcGCTGCGCTCACCGGCCAGCAACACAACGAATTCGTCGCCGCCAAACCGCGAAGCCTCGTCGCCAGGCTCCAGCAGGCGCTGGATACGCCCGGCCACAGCCGCGGGCAGCAAGTCACCAATCTTGTGGCCGAGCGAGGCGTTGAt > 2:64672/1‑150 (MQ=255) gCTGCGCTCACCGGCCAGCAACACCACGAATTCGTCGCCGCCAAACCGCGAAGCCTCGTCGCCGGGCTCCAGCAGGCGCTGGATACGCCCGGCCACAGCCTGTAGCAGCAGGTCACCAATCTTGTGGCCGAGCGAGTCGTTGATCGACtt < 2:260122/150‑1 (MQ=255) gcTCACCGGCCAGCAACACCACGAATTCGTCGCCGCCAAACCGCGAAGCCTCGTCGCCGGGCTCCAGCAGGCGCTGGATACGCCCGGCCACAGCCTGTAGCAGCAGGTCACCAATCTTGTGGCCGAGCGAGTCGTTGATCGACTTGAAAc > 2:124960/1‑150 (MQ=255) cACCGGCCAGCAACACCACGAATTCGTCGCCGCCAAACCGCGAAGCCTCGTCGCCGGGCTCCAGCAGGCGCTGGATACGCCCGGCCACAGCCGGTAGCAGCAGGTCACCAATCTTGTGCCCGAGCGAGTCGTTGATCGACTTGAAACGGt < 1:64672/150‑1 (MQ=255) cGGCCAGCAACACCACGAATTCGTCGCCGCCAAACCGCGAAGCCTCGTCGCCGGGCTCCAGCAGGCGCTGGATACGCCCGGCCACAGCCTGTAGCAGCAGGTCACCAATCTTGTGGCCGAGCGAGTCGTTGATCGACTTGAAACGGTCCa > 2:30651/1‑150 (MQ=255) aCCGCGAAGCCTCGTCGCCGGGCTCCAGCAGGCGCTGGATACGCCCGGCCACAGCCTGTAGCAGCAGGTCACCAATCTTGTGGCCGAGCGAGTCGTTGATCGACTTGAAACGGTCCATGTCGATGAACAGGATCGCCATCAGTCGGCGCt > 2:412450/1‑150 (MQ=255) cgcgAAGCCTCGTCGCCGGGCTCCAGCAGGCGCTGGATACGCCCGGCCACAGCCTGTAGCAGCAGGTCACCAATCTTGTGGCCGAGCGAGTCGTTGATCGACTTGAAACGGTCCATGTCGATGAACAGGATCGCCATCAGTCGGCGCTTg < 1:124960/150‑1 (MQ=255) cgAAGCCTCGTCGCCGGGCTCCAGCAGGCGCTGGATACGCCCGGCCACAGCCTGTAGCAGCAGGTCACCAATCTTGTGGCCGAGCGAGTCGTTGATCGACTTGAAACGGTCCATGTCGATGAACAGGATCGCCATCAGTCGGCGCTTGcc > 1:376024/1‑150 (MQ=255) ccTCGTCGCCGGGCTCCAGCAGGCGCTGGATACGCCCGGCCACAGCCTGTAGCAGCAGGTCACCAATCTTGTGGCCGAGCGAGTCGTTGATCGACTTGAAACGGTCCATGTCGATGAACAGGATCGCCATCAGTCGGCGCTTGCCACGtt > 2:403340/1‑150 (MQ=255) gtcgCCGGGCTCCAGCAGGCGCTGGATACgcccggcgacgaggcttcgcggtttggcggcgacgaattcgtggtgttgctggccggtgagcgcagcgaggagcagatcaacgcctgggtccacgaactggtgcagaagctgtcg > 1:202494‑M2/1‑29 (MQ=255) gtcgCCGGGCTCCAGCAGGCGCTGGATACgcccggcgacgaggcttcgcggtttggcggcgacgaattcgtggtgttgctggccggtgagcgcagcgaggagcagatcaacgcctgggtccacgaactggtgcagaagctgtcg < 2:202494‑M2/144‑116 (MQ=255) gCCGGGCTCCAGCAGGCGCTGGATACgcccggcgacgaggcttcgcggtttggcggcgacgaattcgtggtgttgctggccggtgagcgcagcgaggagcagatca < 1:121530‑M2/106‑81 (MQ=255) gCCGGGCTCCAGCAGGCGCTGGATACgcccggcgacgaggcttcgcggtttggcggcgacgaattcgtggtgttgctggccggtgagcgcagcgaggagcagatca > 2:121530‑M2/1‑26 (MQ=255) gCCGGGCTCCAGCAGGCGCTGGATACGCCCGGCCACAGCCTGTAGCAGCAGGTCACCAATCTTGTGGCCGAGCGAGTCGTTGATCGACTTGAAACGGTCCATGTCGATGAACAGGATCGCCATCAGTCGGCGCTTGCCACGTTGCCGAGt < 1:412450/150‑1 (MQ=255) gCTCCAGCAGGCGCTGGATACGCCCGGCCACAGCCTGTAGCAGCAGGTCACCAATCTTGTGGCCGAGCGAGTCGTTGATCGACTTGAAACGGTCCATGTCGATGAACAGGa < 2:197124/111‑1 (MQ=255) gCTCCAGCAGGCGCTGGATACGCCCGGCCACAGCCTGTAGCAGCAGGTCACCAATCTTGTGGCCGAGCGAGACGTTGATCGACTTGAAACGGTCCATGTCGATGAACAGGa > 1:197124/1‑111 (MQ=255) cagcagGCGCTGGATACGCCCGGCCACAGCCTGTAGCAGCAGGTCACCAATCTTGTGGCCGAGCGAGTCGTTGATCGACTTGAAACGGTCCATGTCGATGAACAGGATCGCCATCAGTCGGCGCTTGCCACGTTGCCGAGTCAGCa > 2:42383/1‑146 (MQ=255) cagcagGCGCTGGATACGCCCGGCCACAGCCTGTAGCAGCAGGTCACCAATCTTGTGGCCGAGCGAGTCGTTGATCGACTTGAAACGGTCCATGTCGATGAACAGGATCGCCATCAGTCGGCGCTTGCCACGTTGCCGAGTCAGCa < 1:42383/146‑1 (MQ=255) tGGATACGCCCGGCCACAGCCTGTAGCAGCAGGTCACCAATCTTGTGGCCGAGCGAGTCGTTGATCGACTTGAAACGGTCCATGTCGATGAACAGGATCGCCATCAGTCGGCGCTTGCCACGTTGCCGAGTCAGCACCTGGCTGGCCACt > 2:165393/1‑150 (MQ=255) | GTGGCCGACAGCTTCTGCACCAGTTCGTGGACCCAGGCGTTGATCTGCTCCTCGCTGCGCTCACCGGCCAGCAACACCACGAATTCGTCGCCGCCAAACCGCGAAGCCTCGTCGCCGGGCTCCAGCAGGCGCTGGATACGCCCGGCCACAGCCTGTAGCAGCAGGTCACCAATCTTGTGGCCGAGCGAGTCGTTGATCGACTTGAAACGGTCCATGTCGATGAACAGGATCGCCATCAGTCGGCGCTTGCCACGTTGCCGAGTCAGCACCTGGCTGGCCACT > NC_002947/3607868‑3608149 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |