| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4588043 | 24 (1.240) | 4 (0.230) | 4/230 | NT | 14.4% | intergenic (‑183/‑139) | PP_4063/ivd | long‑chain fatty acid‑‑CoA ligase/isovaleryl‑CoA dehydrogenase |
| ? | NC_002947 | = 4588104 | 26 (1.510) | intergenic (‑244/‑78) | PP_4063/ivd | long‑chain fatty acid‑‑CoA ligase/isovaleryl‑CoA dehydrogenase | |||||
GTTTTGGGCACGGCTGAAGCAAGCGGGAATACTCTGGCGCAGATTTACGTTTACGTAAAGGTGACGAGTGGATTGACAGTGACCCTCATGCAGGTTTACGTTAACGTAAAGGTGATGAACGACACCCACTTGAGGCGCCACGCCGCCCTCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4587881‑4588043‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtgggagcgggcATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGAGGGCGGCGTGGCGCCTCAAGTGGGTGTCGTTCATCACCTTTACGTTAACGTAAACCTGCATGAGG < NC_002947/4588104‑4587964 GTTTTGGGCACGGCTGAAGCAAGCGGGAATACTCTGGCGCAGATTTACATTTACGTAAAGGTGACGAGTGGATTGACAGTGACCCTCATGCAGGTTTACGTTAACGTAAAGGTGATGAACGACACCCACTTGAGGCGCCACGCCGCCCTC < 1:304344/150‑1 CGGCTGAAGCAAGCGGGAATACTCTGGCGCAGATTTACGTTTACGTAAAGGTGACGAGTGGATTGACAGTGACCCTCATGCAGGTTTACGTTAACGTAAAGGTGATGAACGACACCCACTTGAGGCGCCACGCCGCCCTCTGTGGGAGCG < 2:73422/150‑1 GGCTGAAGCAAGCGGGAATACTCTGGCGCAGATTTACGTTTACGTAAAGGTGACGAGTGGATTGACAGTGACCCTCATGCAGGTTTACGTTAACGTAAAGGTGATGAACGACACCCACTTGAGGCGCCACGCCGCCCTCTGTGGGAGCGG > 2:293868/1‑150 GTAAAGGTGACGAGTGGATTGACAGTGACCCTCATGCAGGTTTACGTTAACGTAAAGGTGATGAACGACACCCACTTGAGGCGCCACGCCGCCCTCTGTG < 1:42104/100‑1 GTAAAGGTGACGAGTGGATTGACAGTGACCCTCATGCAGGTTTACGTTAACGTAAAGGTGATGAACGACACCCACTTGAGGCGCCACGCCGCCCTCTGTG > 2:42104/1‑100 ACCCTCATGCAGGTTTACGTTAACGTAAAGGTGATGAACGACACCCACTTGAGGCGCCACGCCGCCCTCTGTGGGAGCGGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGC > 1:83312/1‑137 ACCCTCATGCAGGTTTACGTTAACGTAAAGGTGATGAACGACACCCACTTGAGGCGCCACGCCGCCCTCTGTGGGAGCGGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGC < 2:83312/137‑1 GTTAACGTAAAGGTGATGAACGACACCCACTTGAGGCGCCACGCCGCCCTCTGTGGGAGCGGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGC > 1:116076/1‑127 GTTAACGTAAAGGTGATGAACGACACCCACTTGAGGCGCCACGCCGCCCTCTGTGGGAGCGGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGC < 2:116076/127‑1 TGGGAGCGGGCTTGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGAGGGCGGCGTGGCGCCTCAAGTGGGTGTCGTTCATCACCTTTACGTTAACGTAAACCTGCATGA > 2:196356/1‑150 GGAGCGGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGAGGGCGGCGTGGCGCCTCAAGTGGGTGTCGTTCATCACCTTTACGTTAACGTAAACCTGCATGAGG > 1:111690/1‑150 GTTTTGGGCACGGCTGAAGCAAGCGGGAATACTCTGGCGCAGATTTACGTTTACGTAAAGGTGACGAGTGGATTGACAGTGACCCTCATGCAGGTTTACGTTAACGTAAAGGTGATGAACGACACCCACTTGAGGCGCCACGCCGCCCTCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4587881‑4588043‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtgggagcgggcATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGAGGGCGGCGTGGCGCCTCAAGTGGGTGTCGTTCATCACCTTTACGTTAACGTAAACCTGCATGAGG < NC_002947/4588104‑4587964 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |