New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2301539 = | 17 (0.880) | 3 (0.170) | 3/230 | NT | 15.7% | intergenic (‑140/‑191) | sbcD/PP_5497 | exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein |
? | NC_002947 | 2301624 = | 17 (0.990) | intergenic (‑225/‑106) | sbcD/PP_5497 | exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein |
ACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGG > NC_002947/2301394‑2301674 | gtacccgtatgctgtatagacctgtgccaaggtcgccatcgcctagcctcatacaagtgagccagttgtagtttgctcgaacacaatttttccgccgcaatcaacggcgagacaactgacaaaaatgccaggcaagcgtggtccaTGTgg < 1:313403‑M1/5‑1 (MQ=255) tgtatagacctgtgccaaggtcgccatcgcctagcctcatacaagtgagccagttgtagtttgctcgaacacaatttttccgccgcaatcaacggcgagacaactgacaaaaatgccaggcaagcgtggtccaTGTGGGAGCGGGCGTGc < 1:471947‑M1/17‑1 (MQ=255) gggAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATg > 2:490436/1‑150 (MQ=255) cctagcctcatacaagtgagccagttgtagtttgctcgaacacaatttttccgccgcaatcaacggcgagacaactgacaaaaatgccaggcaagcgtggtccaTGTgg > 1:306062‑M1/105‑109 (MQ=255) cctagcctcatacaagtgagccagttgtagtttgctcgaacacaatttttccgccgcaatcaacggcgagacaactgacaaaaatgccaggcaagcgtggtccaTGTgg < 2:306062‑M1/5‑1 (MQ=255) gCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATGACTTACTGATTTAGCAGGGACCCTGTGCAGGCGTGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGc > 1:355453/1‑150 (MQ=255) tATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGAGCAAGCCAGCTCCCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCTGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGTCACCGGCTgcg > 1:29469/1‑150 (MQ=255) ggTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCg < 1:96920/150‑1 (MQ=255) tAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGgt < 2:278069/150‑1 (MQ=255) ccAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTc > 1:90038/1‑150 (MQ=255) ccAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTc > 1:47551/1‑150 (MQ=255) ccAAGCGTGGGGCCGCTGTGCGGCCCGACCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTc > 1:13086/1‑150 (MQ=255) gCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCgg > 2:31688/1‑150 (MQ=255) cGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCggg > 2:313403/1‑150 (MQ=255) gtagtttgctcgaacacaatttttccgccgcaatcaacggcgagacaactgacaaaaatgccaggcaagcgtggtccaTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGgcgc > 2:471947‑M1/79‑150 (MQ=255) gCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGc < 1:490436/150‑1 (MQ=255) ctcgaacacaatttttccgccgcaatcaacggcgagacaactgacaaaaatgccaggcaagcgtggtccaTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGcc < 1:46288‑M1/75‑1 (MQ=255) ctcgaacacaatttttccgccgcaatcaacggcgagacaactgacaaaaatgccaggcaagcgtggtccaTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGcc > 2:46288‑M1/71‑145 (MQ=255) cAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGc < 2:90038/150‑1 (MQ=255) ccAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTgg > 2:113546/1‑150 (MQ=255) gAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAg > 1:9886/1‑150 (MQ=255) aaCTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGt < 1:31688/150‑1 (MQ=255) aCTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAAACCCACGCGGGGCATGGCACCGGCTGCGCCCGTGTTCGCGGGCGCGCCCGAACCCCTACGTACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGAt < 1:335408/150‑1 (MQ=25) tttAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTgcgg < 1:113546/150‑1 (MQ=255) cTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCt < 1:401060/102‑1 (MQ=255) cTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCt > 2:401060/1‑102 (MQ=255) | ACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGG > NC_002947/2301394‑2301674 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |