New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3483915 = | 11 (0.570) | 5 (0.270) | 5/250 | NT | 37.5% | coding (2052/3804 nt) | PP_3091 | membrane protein |
? | NC_002947 | 3483952 = | 6 (0.320) | coding (2015/3804 nt) | PP_3091 | membrane protein |
CGATCGACCAGCGAGCTGGAGATCATGAACGACTTGAGGTTCTGCCGGGTTTCGTTGATCAGCTGTTCGTTGCGCGGCAACGACGGCGCCTGGCCCTGCTCCAGCAACTGCACGTACAGCGGGGCATTTTCTGCGATCACGCCAGCGTCGGCCGGGGTGCCTTCGCCTGCGGCGCTGGCCCAGGCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCAC > NC_002947/3483766‑3484055 | ctgtcactgtccgaagaaatgctcgggcgcctggacgagcagcaggtggcctcgatcatcgaggcctacaacaccctcaagctgtacctgttgctgaccgagccccaggcccatccagacccggccttcgtcgctgccagcctgccccag > 2:115653‑M1/150‑150 (MQ=255) aCCAGCGAGCTGGAGATCATGAACGACTTGAGGTTCTGCCGGGTTTCGTTGATCAGCTGTTCGTTGCGCGGCAACGACGGCGCCTGGCCCTGCTCCAGCAACTGCACGTACAGCGGGGCATTTTCTGCGATCACGCCAGCGTCGGCCggg > 2:452343/1‑150 (MQ=255) cAGCGAGCTGGAGATCATGAACGACTTGAGGTTCTGCCGGGTTTCGTTGATCAGCTGTTCGTTGCGCGGCAACGACGGCGCCTGGCCCTGCTCCAGCAACTGCACGTACAGCGGGGCATTTTCTGCGATCACGCCAGCGTCGGCCGGGGt > 2:186523/1‑150 (MQ=255) tcgggcgcctggacgagcagcaggtggcctcgatcatcgaggcctacaacaccctcaagctgtacctgttgctgaccgagccccaggcccatccagacccggccttcgtcgctgccagcctgccccaGGCCGGGGTGCCTTCGCCTgcgg < 1:100861‑M1/23‑1 (MQ=255) gAACGACTTGAGGTTCTGCCGGGTTTCGTTGATCAGCTGTTCGTTGCGCGGCAACGACGGCGCCTGGCCCTTCTCCAGCAACTGCACGTACAGCGTGGGATTTTTTAAGGCGTGGCCATCGTCGGCCGGGTTGCCTTCGCCTTCGGctct > 1:252132/1‑150 (MQ=255) ttGAGGTTCTGCCGGGTTTCGTTGATCAGCTGTTCGTTGCGCGGCAACGACGGCGCCTGGCCCTGCTCCAGCAACTGCACGTACAGCGGGGCATTTTCTGCGATCACGCCAGCGTCGGCCGGGGTGCCTTCGCCTGCGGCGCTGGCCCAg < 2:404518/150‑1 (MQ=255) tGAGGTTCTGCCGGGTTTCGTTGATCAGCTGTTCGTTGCGCGGCAACGACGGCGCCTGGCCCTGCTCCAGCAACTGCACGTACAGCGGGGCATTTTCTGCGATCACGCCAGCGTCGGCCGGGGTGCCTTCGCCTGCGGCGCTGGCCCAgg < 2:486933/150‑1 (MQ=255) agcaggtggcctcgatcatcgaggcctacaacaccctcaagctgtacctgttgctgaccgagccccaggcccatccagacccggccttcgtcgctgccagcctgccccaGGCCGTGGTGCCTTCGCCTGCGGCGCTGGCCCAGGCCTggg > 1:11855‑M1/110‑150 (MQ=255) gggTTTCGTTGATCAGCTGTTCGTTGCGCGGCAACGACGGCGCCTGGCCCTGCTCCAGCAACTGCACGTACAGCGGGGCATTTTCTGCGATCACGCCAGCGTCGGCCGGGGTGCCTTCGCCTGCGGCGCTGCCCCAGGCCTGGGCCAgcg < 1:171041/150‑3 (MQ=255) tcatcgaggcctacaacaccctcaagctgtacctgttgctgaccgagccccaggcccatccagacccggccttcgtcgctgccagcctgccccaGGCCGGGGTGCCTTCGCCTGCGGCGCTGGCCCAGGCCTGGGGCAGGCTGGCAGcga > 2:100861‑M1/95‑150 (MQ=255) tcgaggcctacaacaccctcaagctgtacctgttgctgaccgagccccaggcccatccagacccggccttcgtcgctgccagcctgccccaGGCCGGGGTGCCTTCGCCTGCGGCGCTGGCCCAGGCCTgg < 1:359918‑M1/40‑1 (MQ=255) tcgaggcctacaacaccctcaagctgtacctgttgctgaccgagccccaggcccatccagacccggccttcgtcgctgccagcctgccccaGGCCGGGGTGCCTTCGCCTGCGGCGCTGGCCCAGGCCTgg > 2:359918‑M1/92‑131 (MQ=255) cTGGCCCTGCTCCAGCAACTGCACGTACAGCGGGGCATTTTCTGCGATCACGCCAGCGTCGGCCGGGGTGCCTTCGCCTGCGGCGCTGGCCCATGCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGt < 2:242696/150‑1 (MQ=255) cTGGCCCTGCTCCAGCAACTGCACGTACAGCGGGGCATTTTCTGCGATCACGCCAGCGTCGGCCGGGGTGCCTTCGCCTGCGGCGCTGGCCCAGGCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCAGt < 1:452343/150‑1 (MQ=255) ggCCCTGCTCCAGCAACTGCACGTACAGCGGGGCATTTTCTGCGATCACGCCAGCGTCGGCCGGGGTGCCTTCGCGTGGGGGGCTGGGGGAGGGGTGGGGGAGGCTGGGGGGGGGGGGGGGCGGGTCTGGATGGGCCTGGGGCTCGGTCa < 1:186523/150‑1 (MQ=255) cTCCAGCAACTGCACGTACAGCGGGGCATTTTCTGCGATCACGCCAGCGTCGGCCGGGGTGCCTTCGCCTGCGGCGCTGGCCCAGGCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAg > 1:286732/1‑150 (MQ=255) gCCAGCGTCGGCCGGGGTGCCTTCGCCTGCGGCGCTGGCCCAGGCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCAc > 1:462648/1‑150 (MQ=255) | CGATCGACCAGCGAGCTGGAGATCATGAACGACTTGAGGTTCTGCCGGGTTTCGTTGATCAGCTGTTCGTTGCGCGGCAACGACGGCGCCTGGCCCTGCTCCAGCAACTGCACGTACAGCGGGGCATTTTCTGCGATCACGCCAGCGTCGGCCGGGGTGCCTTCGCCTGCGGCGCTGGCCCAGGCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCAC > NC_002947/3483766‑3484055 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |