New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3483915 =	11 (0.570)	5 (0.270)	5/250	NT	37.5%	coding (2052/3804 nt)	PP_3091	membrane protein
	?	NC_002947	3483952 =	6 (0.320)					coding (2015/3804 nt)	PP_3091	membrane protein

TCTGCCGGGTTTCGTTGATCAGCTGTTCGTTGCGCGGCAACGACGGCGCCTGGCCCTGCTCCAGCAACTGCACGTACAGCGGGGCATTTTCTGCGATCACGCCAGCGTCGGCCGGGGTGCCTTCGCCTGCGGCGCTGGCCCAGGCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCTGCTCGTCCAGGCGCCCGAGCATTTCTTCGGACAGTGACAG  >  NC_002947/3483806‑3484100                                                                                                                                                   |                                                                                                                                                     agcaggtggcctcgatcatcgaggcctacaacaccctcaagctgtacctgttgctgaccgagccccaggcccatccagacccggccttcgtcgctgccagcctgccccaGGCCGTGGTGCCTTCGCCTGCGGCGCTGGCCCAGGCCTggg                                                                                                                                                   >  1:11855‑M1/110‑150 (MQ=255)       gggTTTCGTTGATCAGCTGTTCGTTGCGCGGCAACGACGGCGCCTGGCCCTGCTCCAGCAACTGCACGTACAGCGGGGCATTTTCTGCGATCACGCCAGCGTCGGCCGGGGTGCCTTCGCCTGCGGCGCTGCCCCAGGCCTGGGCCAgcg                                                                                                                                             <  1:171041/150‑3 (MQ=255)                tcatcgaggcctacaacaccctcaagctgtacctgttgctgaccgagccccaggcccatccagacccggccttcgtcgctgccagcctgccccaGGCCGGGGTGCCTTCGCCTGCGGCGCTGGCCCAGGCCTGGGGCAGGCTGGCAGcga                                                                                                                                    >  2:100861‑M1/95‑150 (MQ=255)                   tcgaggcctacaacaccctcaagctgtacctgttgctgaccgagccccaggcccatccagacccggccttcgtcgctgccagcctgccccaGGCCGGGGTGCCTTCGCCTGCGGCGCTGGCCCAGGCCTgg                                                                                                                                                    >  2:359918‑M1/92‑131 (MQ=255)                   tcgaggcctacaacaccctcaagctgtacctgttgctgaccgagccccaggcccatccagacccggccttcgtcgctgccagcctgccccaGGCCGGGGTGCCTTCGCCTGCGGCGCTGGCCCAGGCCTgg                                                                                                                                                    <  1:359918‑M1/40‑1 (MQ=255)                                                  cTGGCCCTGCTCCAGCAACTGCACGTACAGCGGGGCATTTTCTGCGATCACGCCAGCGTCGGCCGGGGTGCCTTCGCCTGCGGCGCTGGCCCATGCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGt                                                                                                  <  2:242696/150‑1 (MQ=255)                                                  cTGGCCCTGCTCCAGCAACTGCACGTACAGCGGGGCATTTTCTGCGATCACGCCAGCGTCGGCCGGGGTGCCTTCGCCTGCGGCGCTGGCCCAGGCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCAGt                                                                                                  <  1:452343/150‑1 (MQ=255)                                                    ggCCCTGCTCCAGCAACTGCACGTACAGCGGGGCATTTTCTGCGATCACGCCAGCGTCGGCCGGGGTGCCTTCGCGTGGGGGGCTGGGGGAGGGGTGGGGGAGGCTGGGGGGGGGGGGGGGCGGGTCTGGATGGGCCTGGGGCTCGGTCa                                                                                                <  1:186523/150‑1 (MQ=255)                                                           cTCCAGCAACTGCACGTACAGCGGGGCATTTTCTGCGATCACGCCAGCGTCGGCCGGGGTGCCTTCGCCTGCGGCGCTGGCCCAGGCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAg                                                                                         >  1:286732/1‑150 (MQ=255)                                                                                           tcgctgccagcctgccccaggcctgggccagcgccgcaggcgaaggcaccccggccTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCgatga                                                         >  2:100861‑M2/57‑150 (MQ=255)                                                                                                     gCCAGCGTCGGCCGGGGTGCCTTCGCCTGCGGCGCTGGCCCAGGCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCAc                                               >  1:462648/1‑150 (MQ=255)                                                                                                          cccaggcctgggccagcgccgcaggcgaaggcaccacggccTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACctgct                                          >  1:11855‑M2/42‑150 (MQ=255)                                                                                                           ccaggcctgggccagcgccgcaggcgaaggcaccccggccTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCga                                                            <  1:359918‑M2/91‑1 (MQ=255)                                                                                                           ccaggcctgggccagcgccgcaggcgaaggcaccccggccTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCga                                                            >  2:359918‑M2/41‑131 (MQ=255)                                                                                                                 CGGGGTGCCTTCGCCTGCGGCGCTGGCCCAGGCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCTGCTCGTc                                   >  2:286732‑M1/1‑150 (MQ=255)                                                                                                                            ccgcaggcgaaggcaccccggccTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCTGCTCGTCCAGGCGCCCGa                        <  1:100861‑M2/127‑1 (MQ=255)                                                                                                                                             cAGGCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAg                                                    <  1:345342/105‑1 (MQ=255)                                                                                                                                             cAGGCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAg                                                    >  2:345342/1‑105 (MQ=255)                                                                                                                                                  cTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCTGCTCGTCCAGGCGCCCGAGCATTTCTTCGGACAGTGACAg  >  2:115653‑M2/2‑150 (MQ=255)                                                                                                                                                   |                                                                                                                                                     TCTGCCGGGTTTCGTTGATCAGCTGTTCGTTGCGCGGCAACGACGGCGCCTGGCCCTGCTCCAGCAACTGCACGTACAGCGGGGCATTTTCTGCGATCACGCCAGCGTCGGCCGGGGTGCCTTCGCCTGCGGCGCTGGCCCAGGCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCTGCTCGTCCAGGCGCCCGAGCATTTCTTCGGACAGTGACAG  >  NC_002947/3483806‑3484100

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.