New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4625972 =NA (NA)389 (0.990) 164/294 0.2 91.5% intergenic (+4519/+45) PP_5654/PP_4091 phosphotriesterase/transposase
?NC_002947 = 4965172 36 (0.090)coding (231/1476 nt) fleQ transcriptional regulator FleQ

Only 100 of 773 total aligned reads displayed.

ATTTCGCGGTAGACCTGGGCACGGTGCAGCGAGTCCAGCAATTGGCTGTAGCTTGGCGGCATTTCCAGGTTGGAAAGCACCCGGCGGCGAAGGTCTTCCGGCAGCTCGGCGGAAGAAATTTCACCTAAAAGCAAAACCGGAAGGAACTCATCCCAGGTAGCCACTGTCTTAAGCAGCCCAAGCAGATTGCCCGGAGCATTCACGGTGCCGATGAGCACGCACAGCACTTCGCGGCTCGAGGACAATGGCTCGACCGCCTGCTGCCAGTCATGGCTGGCACACGCGAGGTTTTCTTCGCC  >  NC_002947/4965023‑4965321
                                                                                                                                                     |                                                                                                                                                     
aTTTCGCGGTAGACCTGGGCACGGTGCAGCGAGTCCAGCAATTGGCTGTAGCTTGGCGGCATTTCCAGGTTGGAAAGCACCCGGCGGCGAAGGTCTTCCGGCAGCTCGGCGGAAGAAATTTCACCTAAAAGCAAAACCGGAAGGAACTCa                                                                                                                                                       <  2:1766813/150‑1 (MQ=255)
 tttCGCGGTAGACCTGGGCACGGTGCAGCGAGTCCAGCAATTGGCTGTAGCTTGGCGGCATTTCCAGGTTGGAAAGCACCCGGCGGCGAAGGTCTTCCGGCAGCTCGGCGGAAGAAATTTCACCTAAAAGCAAAACCGGAAGGAACTCAg                                                                                                                                                      <  2:373588‑M2/150‑2 (MQ=255)
   cacgggcttggggtagaggtagactttttcgactttgctgtcggggcgcatcatggcgggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAACTCATcc                                                                                                                                                    >  1:6322115‑M2/140‑150 (MQ=255)
    acgggcttggggtagaggtagactttttcgactttgctgtcggggcgcatcatggcgggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAACTCATccc                                                                                                                                                   >  1:7586980‑M2/139‑150 (MQ=255)
      gggcttggggtagaggtagactttttcgactttgctgtcggggcgcatcatggcgggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAACTCATCCCAg                                                                                                                                                 <  2:7340291‑M2/14‑1 (MQ=255)
      cgGTAGACCTGGGCACGGTGCAGCGAGTCCAGCAATTGGCTGTAGCTTGGCGGCATTTCCAGGTTGGAAAGCACCCGGCGGCGAAGGTCTTCCGGCAGCTCGGCGGAAGAAATTTCACCTAAAAGCAAAACCGGAAGGAACTCAgtaacc                                                                                                                                                 >  1:5882946‑M2/1‑144 (MQ=255)
                 ggCACGGTGCAGCGAGTCCAGCAAATGGCTGTAGCTTGGCGGCATTTCCAGGTTGGACAGCACCCGGCGGCGAAGGTCTTCCGGCAGCTCGGCGGAAGAAATTTCACCTAACAGCAAAACCGGAAGGAACTCAgtaaccgatccatgaac                                                                                                                                      >  1:4653267‑M2/1‑133 (MQ=255)
                    ggtagactttttcgactttgctgtcggggcgcatcatggcgggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAACTCATCCCAGGTAGCCACTGTCtt                                                                                                                                   <  2:3889971‑M2/28‑1 (MQ=255)
                    aCGGTGCAGCGAGTCCAGCAATTGGCTGTAGCTTGGCGGCATTTCCAGGTTGGAAAGCACCCGGCGGCGAAGGTCTTCCGGCAGCTCGGCGGAAGAAATTTCACCTAAAAGCAAAACCGGAAGGAACTCAgtaaccgatccatgaacccc                                                                                                                                   >  1:4941812‑M2/1‑130 (MQ=255)
                     gtagactttttcgactttgctgtcggggcgcatcatggcgggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAACTCATCCCAGGTAGCCACTGTCTTa                                                                                                                                  >  1:1727111‑M2/122‑150 (MQ=255)
                     gtagactttttcgactttgctgtcggggcgcatcatggcgggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAACTCATCCCAGGTAGCCACTGTCTTa                                                                                                                                  >  1:1483261‑M2/122‑150 (MQ=255)
                     gtagacttgttcgactttgctgtcggggcgcatcatggcgggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAACTCATCCCAGGTAGCCACTGTCTTa                                                                                                                                  >  1:6409967‑M2/122‑150 (MQ=255)
                         actttttcgactttgctgtcggggcgcatcatggcgggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAACTCATCCCAGGTAGCCACTGTCTTAagca                                                                                                                              <  2:8309420‑M2/33‑1 (MQ=255)
                          cAGCGAGTCCAGCAATTGGCTGTAGCTTGGCGGCATTTCCAGGTTGGAAAGCACCCGGCGGCGAAGGTCTTCCGGCAGCTCGGCGGAAGAAATTTCACCTAAAAGCAAAACCGGAAGGAACTCAgtaaccgatccatgaaccccacctac                                                                                                                             >  2:5495938‑M2/1‑124 (MQ=255)
                           tttttcgactttgctgtcggggcgcatcatggcgggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAACTCATCCCAGGTAGCCACTGTCTTAagcagc                                                                                                                            >  2:1447202‑M2/116‑150 (MQ=255)
                           tttttcgactttgctgtcggggcgcatcatggcgggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAACTCATCCCAGGTAGCCACTGTCTTAagcagc                                                                                                                            <  2:7031593‑M2/35‑1 (MQ=255)
                           tttttcgactttgctgtcggggcgcatcatggcgggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAACTCATCCCAGGTAGCCACTGTCTTAagcagc                                                                                                                            <  1:3660329‑M2/35‑1 (MQ=255)
                           aGCGAGTCCAGCAATTGGCTGTAGCTTGGCGGCATTTCCAGGTTGGAAAGCACCCGGCGGCGAAGGTCTTCCGGCAGCTCGGCGGAAGAAATTTCACCTAAAAGCAAAACCGGAAGGAACTCAgtaaccgatccatgaaccccacctacc                                                                                                                            >  2:525695‑M2/1‑123 (MQ=255)
                            gCGAGTCCAGCAATTGGCTGTAGCTTGGCGGCATTTCCAGGTTGGAAAGCACCCGGCGGCGAAGGTCTTCCGGCAGCTCGGCGGAAGAAATTTCACCTAAAAGCAAAACCGGAAGGAACTCAgtaaccgatccatgaaccccacctacca                                                                                                                           <  2:4188709‑M2/150‑29 (MQ=255)
                            gCGAGTCCAGCAATTGGCTGTAGCTTGGCGGCATTTCCAGGTTGGAAAGCACCCGGCGGCGAAGGTCTTCCGGCAGCTCGGCGGAAGAAATTTCACCTAAAAGCAAAACCGGAAGGAACTCAgtaaccgatccatgaaccccacctacca                                                                                                                           <  2:1152764‑M2/150‑29 (MQ=255)
                            gCGAGTCCAGCAATTGGCTGTAGCTTGGCGGCATTTCCAGGTTGGAAAGCACCCGGCGGCGAAGGTCTTCCGGCAGCTCGGCGGAAGAAATTTCACCTAAAAGCAAAACCGGAAGGAACTCATCCCAGGTAGCCACTGTCTTAAGCAGcc                                                                                                                           >  1:8497053/1‑150 (MQ=255)
                                cgactttgctgtcggggcgcatcatggcgggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAACTCATCCCAGGTAGCCACTGTCTTAAGCAGCCCAAg                                                                                                                       <  1:2015941‑M2/40‑1 (MQ=255)
                                 gactttgctgtcggggcgcatcatggcgggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAACTCATCCCAGGTAGCCACTGTCTTAAGCAGCCCAAGc                                                                                                                      <  1:4785484‑M2/41‑1 (MQ=255)
                                 gactttgctgtcggggcgcatcatggcgggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAACTCATCCCAGGTAGCCACTGTCTTAAGCAGCCCAAGc                                                                                                                      >  2:6057932‑M2/110‑150 (MQ=255)
                                  actttgctgtcggggcgcatcatggcgggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAACTCATCCCAGGTAGCCACTGTCTTAAGCAGCCCAAGCa                                                                                                                     <  1:4709100‑M2/42‑1 (MQ=255)
                                   cAGCAATTGGCTGTAGCTTGGCGGCATTTCCAGGTTGGAAAGCACCCGGCGGCGAAGGTCTTCCGGCAGCTCGGCGGAAGAAATTTCACCTAAAAGCAAAACCGGAAGGAACTCAgtaaccgatccatgaaccccacctaccacaaggtg                                                                                                                    >  1:3188844‑M2/1‑115 (MQ=255)
                                    tttgctgtcggggcgcatcatggcgggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAACTCATCCCAGGTAGCCACTGTCTTAAGCAGCCCAAGCAGa                                                                                                                   >  1:6226798‑M2/107‑150 (MQ=255)
                                    aGCAATTGGCTGTAGCTTGGCGGCATTTCCAGGTTGGAAAGCACCCGGCGGCGAAGGTCTTCCGGCAGCTCGGCGGAAGAAATTTCACCTAAAAGCAAAACCGGAAGGAACTCAgtaaccgatccatgaaccccacctaccacaaggtgg                                                                                                                   <  2:5843680‑M2/150‑37 (MQ=255)
                                      cAATTGGCTGTAGCTTGGCGGCATTTCCAGGTTGGAAAGCACCCGGCGGCGAAGGTCTTCCGGCAGCTCGGCGGAAGAAATTTCACCTAAAAGCAAAACCGGAAGGAACTCAgtaaccgatccatgaaccccacctaccacaaggtggaa                                                                                                                 >  1:6811414‑M2/1‑112 (MQ=255)
                                          tGGCTGTAGCTTGGCGGCATTTCCAGGTTGGAAAGCACCCGGCGGCGAAGGTCTTCCGGCAGCTCGGCGGAAGAAATTTCACCTAAAAGCAAAACCGGAAGGAACTCATCCCAGGTAGCCACTGTCTTAAGCAGCCCAAGCAGATTGccc                                                                                                             <  1:5314898/150‑1 (MQ=255)
                                            gCTGTAGCTTGGCGGCATTTCCAGGTTGGAAAGCACCCGGCGGCGAAGGTCTTCCGGCAGCTCGGCGGAAGAAATTTCACCTAAAAGCAAAACCGGAAGGAACTCAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaa                                                                                                           >  1:6000300‑M2/1‑106 (MQ=255)
                                            gCTGTAGCTTGGCGGCATTTCCAGGTTGGAAAGCACCCGGCGGCGAAGGTCTTCCGGCAGCTCGGCGGAAGAAATTTCACCTAAAAGCAAAACCGGAAGGAACTCAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaa                                                                                                           >  2:22531‑M2/1‑106 (MQ=255)
                                             ggggcgcatcatggcgggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAACTCATCCCAGGTAGCCACTGTCTTAAGCAGCCCAAGCAGATTGCCCGGa                                                                                                          <  2:8144717‑M2/53‑1 (MQ=255)
                                              tGTAGCTTGGCGGCATTTCCAGGTTGGAAAGCACCCGGCGGCGAAGGTCTTCCGGCAGCTCGGCGGAAGAAATTTCACCTAAAAGCAAAACCGGAAGGAACTCAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagt                                                                                                         <  2:5056140‑M2/150‑47 (MQ=255)
                                                    ttGGCGGCATTTCCAGGTTGGAAAGCACCCGGCGGCGAAGGTCTTCCGGCAGCTCGGCGGAAGAAATTTCACCTAAAAGCAAAACCGGAAGGAACTCAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgt                                                                                                   <  2:7251869‑M2/150‑53 (MQ=255)
                                                    atcatggcgggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAACTCATCCCAGGTAGCCACTGTCTTAAGCAGCCCAAGCAGATTGCCCGGAGCATTCa                                                                                                   <  1:1860397‑M2/60‑1 (MQ=255)
                                                    atcatggcgggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAACTCATCCCAGGTAGCCACTGTCTTAAGCAGCCCAAGCAGATTGCCCGGAGCATTCa                                                                                                   <  1:7411568‑M2/60‑1 (MQ=255)
                                                      ggcggcATTTCCAGGTTGGAAAGCACCCGGCGGCGAAGGTCTTCCGGCAGCTCGGCGGAAGAAATTTCACCTAAAAGCAAAACCGGAAGGAACTCAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtgg                                                                                                 <  2:1554478‑M2/150‑55 (MQ=255)
                                                      catggcgggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAACTCATCCCAGGTAGCCACTGTCTTAAGCAGCCCAAGCAGATTGCCCGGAGCATTCACg                                                                                                 <  2:5763573‑M2/62‑1 (MQ=255)
                                                       gcggcATTTCCAGGTTGGAAAGCACCCGGCGGCGAAGGTCTTCCGGCAGCTCGGCGGAAGAAATTTCACCTAAAAGCAAAACCGGAAGGAACTCAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggc                                                                                                >  1:4188709‑M2/1‑95 (MQ=255)
                                                       gcggcATTTCCAGGTTGGAAAGCACCCGGCGGCGAAGGTCTTCCGGCAGCTCGGCGGAAGAAATTTCACCTAAAAGCAAAACCGGAAGGAACTCAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggc                                                                                                >  2:3256689‑M2/1‑95 (MQ=255)
                                                         ggcATTTCCAGGTTGGAAAGCACCCGGCGGCGAAGGTCTTCCGGCAGCTCGGCGGAAGAAATTTCACCTAAAAGCAAAACCGGAAGGAACTCAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcat                                                                                              <  2:6892382‑M2/150‑58 (MQ=255)
                                                         ggcATTTCCAGGTTGGAAAGCACCCGGCGGCGAAGGTCTTCCGGCAGCTCGGCGGAAGAAATTTCACCTAAAAGCAAAACCGGAAGGAACTCAgtaaccgatccatgaaccccacctacc                                                                                                                            >  1:7900690‑M2/1‑93 (MQ=255)
                                                          gcgggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAACTCATCCCAGGTAGCCACTGTCTTAAGCAGCCCAAGCAGATTGCCCGGAGCATTCACGGTGc                                                                                             <  1:5074589‑M2/66‑1 (MQ=255)
                                                             ggctggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAACTCATCCCAGGTAGCCACTGTCTTAAGCAGCCCAAGCAGATTGCCCGGAGCATTCACGGTGCCGa                                                                                          <  2:251433‑M2/69‑1 (MQ=255)
                                                                tggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAACTCATCCCAGGTAGCCACTGTCTTAAGCAGCCCAAGCAGATTGCCCGGAGCATTCACGGTGCCGATGa                                                                                       <  2:7622091‑M2/72‑1 (MQ=255)
                                                                tggctccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAACTCATCCCAGGTAGCCACTGTCTTAAGCAGCCCAAGCAGATTGCCCGGAGCATTCACGGTGCCGATGa                                                                                       <  1:3072466‑M2/72‑1 (MQ=255)
                                                                   ggTTGGAAAGCACCCGGCGGCGAAGGTCTTCCGGCAGCTCGGCGGAAGAAATTTCACCTAAAAGCAAAACCGGAAGGAACTCAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaa                                                                                    >  1:7173542‑M2/1‑83 (MQ=255)
                                                                    tccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAACTCATCCCAGGTAGCCACTGTCTTAAGCAGCCCAAGCAGATTGCCCGGAGCATTCACGGTGCCGATGAgcac                                                                                   >  1:3470004‑M2/75‑150 (MQ=255)
                                                                    tccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAACTCATCCCAGGTAGCCACTGTCTTAAGCAGCCCAAGCAGATTGCCCGGAGCATTCACGGTGCCGATGAgcac                                                                                   >  2:7513310‑M2/75‑150 (MQ=255)
                                                                    tccagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAACTCATCCCAGGTAGCCACTGTCTTAAGCAGCCCAAGCAGATTGCCCGGAGCATTCACGGTGCCGATGAgcac                                                                                   >  1:836215‑M2/75‑150 (MQ=255)
                                                                     ttGGAAAGCACCCGGCGGCGAAGGTCTTCCGGCAGCTCGGCGGACGAAATTTCACCTAAAAGCAAAACCGGAAGGAACTCAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaaca                                                                                  <  1:7746742‑M2/150‑70 (MQ=255)
                                                                      cagaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAACTCATCCCAGGTAGCCACTGTCTTAAGCAGCCCAAGCAGATTGCCCGGAGCATTCACGGTGCCGATGAgcacgc                                                                                 >  1:5546188‑M2/73‑150 (MQ=255)
                                                                       agaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAACTCATCCCAGGTAGCCACTGTCTTAAGCAGCCCAAGCAGATTGCCCGGAGCATTCACGGTGTCGATGAgcacgca                                                                                <  1:3335617‑M2/79‑1 (MQ=255)
                                                                       agaaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAACTCATCCCAGGTAGCCACTGTCTTAAGCAGCCCAAGCAGATTGCCCGGAGCATTCACGGTGCCGATGAgcacgca                                                                                >  2:6468223‑M2/72‑150 (MQ=255)
                                                                         aaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAACTCATCCCAGGTAGCCACTGTc                                                                                                                                     <  1:4080664‑M2/26‑1 (MQ=255)
                                                                         aaagaaatcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAACTCATCCCAGGTAGCCACTGTCTTAAGCAGCCCAAGCAGATTGCCCGGAGCATTCACGGTGCCGATGAGCACGcaca                                                                              >  2:6695257‑M2/70‑150 (MQ=255)
                                                                         aaaGCACCCGGCGGCGAAGGTCTTCCGGCAGCTCGGCGGAAGAAATTTCACCTAAAAGCAAAACCGGAAGGAACTCAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttc                                                                              <  2:7172890‑M2/150‑74 (MQ=255)
                                                                                tcgggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAACTCATCCCAGGTAGCCACTGTCTTAAGCAGCCCAAGCAGATTGCCCGGAGCATTCACGGTGCCGATGAGCACGCACAGCACTTc                                                                       >  2:6340486‑M2/63‑150 (MQ=255)
                                                                                 cggcggCGAAGGTCTTCCGGCAGCTCGGCGGAAGAAATTTCACCTAAAAGCAAAACCGGAAGGAACTCAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcag                                                                      <  2:4758588‑M2/150‑82 (MQ=255)
                                                                                  gggagcacagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAACTCATCCCAGGTAGCCACTGTCTTAAGCAGCCCAAGCAGATTGCCCGGAGCATTCACGGTGCCGATGAGCACGCACAGCACTTcgc                                                                     <  1:2354835‑M2/90‑1 (MQ=255)
                                                                                  ggcggcGAAGGTCTTCCGGCAGCTCGGCGGAAGAAATTTCACCTAAAAGCAAAACCGGAAGGAACTCAgtaaccgatccatgaacccca                                                                                                                                  >  2:4860643‑M2/1‑68 (MQ=255)
                                                                                        gAAGGTCTTCCGGCAGCTCGGCGGACGAAATTTCACCTAAAAGCAAAACCGGAAGGAACTCAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcagcagcgct                                                               <  1:400190‑M2/150‑89 (MQ=255)
                                                                                         cagcatcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAACTCATCCCAGGTAGCCACTGTCTTAAGCAGCCCAAGCAGATTGCCCGGAGCATTCACGGTGCCGATGAGCACGCACAGCACTTCGCGGCTCGa                                                              >  1:8122732‑M2/54‑150 (MQ=255)
                                                                                         aaGGTCTTCCGGCAGCTCGGCGGAAGAAATTTCACCTAAAAGCAAAACCGGAAGGAACTCAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcagcagcgctt                                                              >  2:1039477‑M2/1‑61 (MQ=255)
                                                                                          aGGTCTTCCGGCAGCTCGGCGGAAGAAATTTCACCTAACAGCAAAACCGGAAGGAACTCAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcagcagcgcttc                                                             >  1:3804912‑M2/1‑60 (MQ=255)
                                                                                            catcgggaatcaggtggacggttggaatgttgggatgatggatcccttacGGAACTCATCCCAGGTAGCCACTGTCTTAAGCAGCCCAAGCAGATTGCCCGGAGCATTCACGGTGCCGATGAGCACGCACAGCACTTCGCGGCTCGAGGa                                                           >  2:8495840‑M2/51‑150 (MQ=255)
                                                                                            catcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAACTCATCCCAGGTAGCCACTGTCTTAAGCAGCCCAAGCAGATTGCCCGGAGCATTCACGGTGCCGATGAGCACGCACAGCACTTCGCGGCTCGAGGa                                                           <  2:3164718‑M2/100‑1 (MQ=255)
                                                                                             tCTTCCGGCAGCTCGGCGGAAGAAATTTCACCTAAAAGCAAAACCGGAAGGAACTCAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcagcagcgcttcgta                                                          >  1:2699366‑M2/1‑57 (MQ=255)
                                                                                             tCTTCCGGCAGCTCGGCGGAAGAAATTTCACCTAAAAGCAAAACCGGAAGGAACTCAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcagcagcgcttcgta                                                          >  1:2936708‑M2/1‑57 (MQ=255)
                                                                                             atcgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAACTCATCCCAGGTAGCCACTGTCTTAAGCAGCCCAAGCAGATTGCCCGGAGCATTCACGGTGCCGATGAGCACGCACAGCACTTCGCGGCTCGAGGAc                                                          >  1:214127‑M2/50‑150 (MQ=255)
                                                                                               cgggaatcaggtggacggttggaatgtggggatgatggatcccttacGGAACTCATCCCAGGTAGCCACTGTCTTAAGCAGCCCAAGCAGATTGCCCGGAGCATTCACGGTGCCGATGAGCACGCACAGCACTTCGCGGCTCGAGGACaa                                                        >  2:4608771‑M2/48‑150 (MQ=255)
                                                                                                    atcaggtggacggttggaatgtggggatgatggatcccttacGGAACTCATCCCAGGTAGCCACTGTCTTAAGCAGCCCAAGCAGATTGCCCGGAGCATTCACGGTGCCGATGGGCACGCACAGCACTTCGCGGCTCGAGGACAATGGCt                                                   <  2:4361400‑M2/108‑1 (MQ=255)
                                                                                                         tCGGCGGAAGAAATTTCACCTAAAAGCAAAACCGGAAGGAACTCAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcagcagcgcttcgtagtctgctaccga                                              <  1:436767‑M2/150‑106 (MQ=255)
                                                                                                         gtggacggttggaatgtggggatgatggatcccttacGGAACTCATCCCAGGTAGCCACTGTCTTAAGCAGCCCAAGCAGATTGCCCGGAGCATTCACGGTGCCGATGAGCACGCACAGCACTTCGCGGCTCGAGGACAATGGCTCGAcc                                              >  1:2294493‑M2/38‑150 (MQ=255)
                                                                                                            gcggAAGAAATTTCACCTAAAAGCAAAACCGGAAGGAACTCAgtaaccgatccatgaaccccacctaccaccaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcagcagcgcttcgtagtctgctaccgatga                                           >  2:3430803‑M2/1‑42 (MQ=255)
                                                                                                            gcggAAGAAATTTCACCTAAAAGCAAAACCGGAAGGAACTCAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcagcagcgcttcgtagtctgctaccgatga                                           >  1:2800140‑M2/1‑42 (MQ=255)
                                                                                                             cggAAGAAATTTCACCTAAAAGCAAAACCGGAAGGAACTCAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcagcagcgcttcgtagtctgctaccgatgag                                          >  1:6931498‑M2/1‑41 (MQ=255)
                                                                                                              ggAAGAAATTTCACCTAAAAGCAAAACCGGAAGGAACTCAgtaaccgaaccatgaaccccaccaaccacaaggtggaagccaaagttaccgtggcatcactggcgaacagttccatggcagcagcgcttcgtagtctgctaccgatgagg                                         <  2:6213398‑M2/150‑111 (MQ=255)
                                                                                                                gttggaatgtggggatgatggatcccttacGGAACTCATCCCAGGGAGCCACTGTCTTAAGCAGCCCAAGCAGATTGCCCGGAGCATTCACGGTGCCGATGAGCACGCACAGCACTTCGCGGCTCGAGGACAATGGCTCGACCGCctgct                                       <  2:4551974‑M2/120‑1 (MQ=255)
                                                                                                                  tggaatgtggggatgatggatcccttacGGAACTCATCCCAGGTAGCCACTGTCTTAAGCAGCCCAAGCAGATTGCCCGGAGCATTCACGGTGCCGATGAGCACGCACAGCACTTCGCGGCTCGAGGACAATGGCTCGACCGCCtgctgc                                     <  2:2693992‑M2/122‑1 (MQ=255)
                                                                                                                    aaTTTCACCTAAAAGCAAAACCGGAAGGAACTCAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcagcagcgcttcgtagtctgctaccgatgaggcgtgcg                                   >  2:404115‑M2/1‑34 (MQ=255)
                                                                                                                     aTTTCACCTAAAAGCAAAACCGGAAGGAACTCAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcagcagcgcttcgtagtctgctaccgatgaggcgtgcgg                                  <  1:6168672‑M2/150‑118 (MQ=255)
                                                                                                                      atgtggggatgatggatcccttacGGAACTCATCCCAGGTAGCCACTGTCTTAAGCAGCCCAAGCAGATTGCCCGGAGCATTCACGGTGCCGATGAGCACGCACAGCACTTCGCGGCTCGAGGACAATGGCTCGACCGCCTGCTGCCAGt                                 >  2:7947284‑M2/25‑150 (MQ=255)
                                                                                                                          aCCTAAAAGCAAAACCGGAAGGAACTCAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcagcagcgcttcgtagtctgctaccgatga                                           <  1:2505439‑M2/136‑109 (MQ=255)
                                                                                                                              atgatggatcccttacGGAACTCATCCCAGGTAGCCACTGTCTTAAGCAGCCCAAGCAGATTGCCCGGAGCATTCACGGTGCCGATGAGCACGCACAGCACTTCGCGGCTCGAGGACAATGGCTCGACCGCCTGCTGCCAGTCAtggctg                         <  1:8617433‑M2/134‑1 (MQ=255)
                                                                                                                               acagcAAAACCGGAAGGAACTCAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcagcagcgcttcgtagtctgctaccgatgaggcgtgcggcagtcgctcc                        >  1:7072533‑M2/3‑23 (MQ=255)
                                                                                                                                gatggatcccttacGGAACTCATCCCAGGTAGCCACTGTCTTAAGCAGCCCAAGCAGATTGCCCGGAGCATTCACGGTGCCGATGAGCACGCACAGCACTTCGCGGCTCGAGGACAATGGCTCGACCGCCTGCTGCCAGTCAtggctggc                       >  1:6578697‑M2/15‑150 (MQ=255)
                                                                                                                                aaGCAAAACCGGAAGGAACTCAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcagcagcgcttcgtagtctgctaccgatgaggcgtgcggcagtcgctcca                       <  1:1017564‑M2/150‑129 (MQ=255)
                                                                                                                                    gatcccttacGGAACTCATCCCAGGTAGCCACTGTCTTAAGCAGCCCAAGCAGATTGCCCGGAGCATTCACGGTGCCGATGAGCACGCACAGCACTTCGCGGCTCGAGGACAATGGCTCGACCGCCTGCTGCCAGTCATGGCTGGCacac                   >  2:1991491‑M2/11‑150 (MQ=255)
                                                                                                                                       aCCGGAAGGAACTCAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcagcagcgcttcgtagtctgctaccgatgaggcgtgcggcagtcgctccaggacgtg                >  1:4538019‑M2/1‑15 (MQ=255)
                                                                                                                                        ccGGAAGGAACTCAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcagcagcgcttcgtagtctgctaccgatgaggcgtgcggcagtcgctccaggacgtgg               <  2:5589072‑M2/150‑137 (MQ=255)
                                                                                                                                               gaaCTCATCCCAGGTAGCCACTGTCTTAAGCAGCCCAAGCAGATTGCCCGGAGCATTCACGGTGCCGATGAGCACGCACAGCACTTCGCGGCTCGAGGACAATGGCTCGACCGCCTGCTGCCAGTCATGGCTGGCACACGCGAGGTTttc        <  1:5824476/150‑1 (MQ=255)
                                                                                                                                                aaCTCAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcagcagcgcttcgtagtctgctaccgatgaggcgtgcggcagtcgctccaggacgtggcgcagcca       <  1:1573439‑M2/150‑145 (MQ=255)
                                                                                                                                                 aCTCATCCCAGGTAGCCACTGTCTTAAGCAGCCCAAGCAGATTGCCCGGAGCATTCACGGTGCCGATGAGCACGCACAGCACTTCGCGGCTCGAGGACAATGGCTCGACCGCCTGCTGCCAGTCATGGCTGGCACACGCGAGGTTttctt      >  2:2992599/1‑150 (MQ=255)
                                                                                                                                                  cTCATCCCAGGTAGCCACTGTCTTAAGCAGCCCAAGCAGATTGCCCGGAGCATTCACGGTGCCGATGAGCACGCACAGCACTTCGCGGCTCGAGGACAATGGCTCGACCGCCTGCTGCCAGTCATGGCTGGCACACGCGAGGTTttcttc     <  2:8592031/150‑1 (MQ=255)
                                                                                                                                                   tCAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcagcagcgcttcgtagtctgctaccgatgaggcgtgcggcagtcgctccaggacgtggcgcagccacgt    <  1:5737077‑M2/150‑148 (MQ=255)
                                                                                                                                                   tCAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcagcagcgcttcgtagtct                                                      >  2:1370748‑M2/1‑3 (MQ=255)
                                                                                                                                                   tCAgtaaccgatccatgaaccccacctaccacaaggtggaagccaaagttaccgtggcatctctggcgaacagttccatggcagcagcgcttcgtagtct                                                      <  1:1370748‑M2/100‑98 (MQ=255)
                                                                                                                                                    cATCCCAGGTAGCCACTGTCTTAAGCAGCCCAAGCAGATTGCCCGGAGCATTCACGGTGCCGATGAGCACGCACAGCACTTCGCGGCTCGAGGACAATGGCTCGACCGCCTGCTGCCAGTCATGGCTGGCACACGCGAGGTTTTCTTCGc   <  1:1160031/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
ATTTCGCGGTAGACCTGGGCACGGTGCAGCGAGTCCAGCAATTGGCTGTAGCTTGGCGGCATTTCCAGGTTGGAAAGCACCCGGCGGCGAAGGTCTTCCGGCAGCTCGGCGGAAGAAATTTCACCTAAAAGCAAAACCGGAAGGAACTCATCCCAGGTAGCCACTGTCTTAAGCAGCCCAAGCAGATTGCCCGGAGCATTCACGGTGCCGATGAGCACGCACAGCACTTCGCGGCTCGAGGACAATGGCTCGACCGCCTGCTGCCAGTCATGGCTGGCACACGCGAGGTTTTCTTCGCC  >  NC_002947/4965023‑4965321

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.