| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4586100 | 23 (0.520) | 8 (0.250) | 8/198 | 2.8 | 34.3% | intergenic (+139/+78) | PP_4061/PP_4063 | hypothetical protein/long‑chain fatty acid‑‑CoA ligase |
| ? | NC_002947 | = 4586128 | 14 (0.440) | intergenic (+167/+50) | PP_4061/PP_4063 | hypothetical protein/long‑chain fatty acid‑‑CoA ligase | |||||
GACAGTGGGCGACCCGCCGAGCCAGGAGCCACCGGTGAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4585916‑4586100‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccggcctcttcgcgggtaaacccgctcctaccagggGCAGCGCC‑GCATTCAAGGCCGGCACGGTCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCGATCAATGCAAGATCTTCACCTTGCCAAGCACCCGGTCATCCTCAACCTTTCAATGGAGCAGCGCAGATCAGCTGTTCA < NC_002947/4586128‑4585983 GACAGTGGGCGACCCGCCGAGCCAGGAGCCACCGGTGAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGC < 2:737282/150‑1 AGTGGGCGACCCGCCGAGCCAGGAGCCACCGGTGAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGG > 2:88205/1‑150 GCGACCCGCCGAGCCAGGAGCCACCGGTGAAGGCTTAAGGGTAGACCACGGCGCCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCT > 2:260768/1‑150 CCGCCGAGCCAGGAGCCACCGGTGAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCG < 2:862894/150‑1 AGGAGCCACCGGTGAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCG > 1:181181/1‑150 ACCGGTGAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG > 2:781785/1‑134 ACCGGTGAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGG < 1:781785/134‑1 GTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGGCAGCGCC‑GCATTCAAGGCCGGCACGGTCCC < 1:88205/150‑1 ACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGGCAGCGCC‑GCATTCAAGGCCGGCACGGTCCCTGGT < 2:181181/150‑1 CAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGGCAGCGCC‑GCATTCAAGGCCGGCACGGTCCCTGGTA < 1:686601/150‑1 TCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGGCAGCGCC‑GCATTCAAGGCCGGCACGGTCCCTGGTAGGAGCGG < 1:1030680/150‑1 GCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCG < 2:1037284/40‑1 GCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCG > 1:1037284/1‑40 GCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGGCAGCGCC‑GCATTCAAGGCCGGCACGGTCCCTG > 2:319142/1‑81 GCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGGCAGCGCC‑GCATTCAAGGCCGGCACGGTCCCTG < 1:319142/81‑1 ATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGACCGCGCC‑GCATTCAAGGCCGGCACGGT > 2:461852/1‑74 ATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGACCGCGCC‑GCATTCAAGGCCGGCACGGT < 1:461852/74‑1 GCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGGCAGCGCC‑GCATTCAAGGCCGGCACGGTCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCGATCAATGCAAGATCTTCACCTTGCCAAGCACCCGGTCATCCTCAACCTT > 2:169885/1‑150 CTCTTCGCGGGTAAACCCGCTCCTACCAGGGGCAGCGCC‑GCATTCAAGGCCGGCACGGTCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCGATCAATGCAAGATCTTCACCTTGCCAAGCACCCGGTCATCCTCAACCTTTC > 1:907168/1‑150 TCTTCGCGGGTAAACCCGCTCCTACCAGGGGCAGCGCC‑GCATTCAAGGCCGGCACGGTCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCGATCAATGCAAGATCTTCACCTTGCCAAGCACCCGGTCATCCTCAACCTTTCA > 1:588600/1‑150 TTCGCGGGTAAACCCGCTCCTACCAGGGGCAGCGCC‑GCATTCAAGGCCGGCACGGTCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCGATCAATGCAAGATCTTCACCTTGCCAAGCACCCGGTCATCCTCAACCTTTCAAT < 1:169885/150‑1 GTAAACCCGCTCCTACCAGGGGCAGCGCC‑GCATTCAAGGCCGGCACGGTCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCGATCAATGCAAGATCTTCACCTTGCCAAGCACCCGGTCATCCTCAACCTTTCAATGGAGCAG > 2:426059/1‑150 GTAAACCCGCTCCTACCAGGGGCAGCGCC‑GCATTCAAGGCCGGCACGGTCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCGATCAATGCAAGATCTTCACCTTGCCAAGCACCCGGTCATCC < 2:483872/130‑1 GTAAACCCGCTCCTACCAGGGGCAGCGCC‑GCATTCAAGGCCGGCACGGTCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCGATCAATGCAAGATCTTCACCTTGCCAAGCACCCGGTCATCC > 1:483872/1‑130 GTAAACCCGCTCCTACCAGGGGCAGCGCC‑GCATTCAAGGCCGGCACGGTCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCGATCAAT > 1:947293/1‑95 GTAAACCCGCTCCTACCAGGGGCAGCGCC‑GCATTCAAGGCCGGCACGGTCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCGATCAAT < 2:947293/95‑1 CCCGCTCCTACCATGGGCAGCGCC‑GCATTCAAGGCCGGCACGGTCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCGATCAATGCAAGATCTTCACCTTGCCAAGCACCCGGTCATCCTCAAACTTTCCATCGAGCAGCGCAG > 2:62577/1‑150 CCGCTCCTACCAGGGACCGTGCCGGCCTTGAATG‑CGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCGATCAATGCAAGATCTTCACCTTGCCAAGCACCCGGTCATCCTCAACCTTTCAATGGAGCAGCGCAGA > 2:686906/1‑150 CTCCTACCAGGGGCAGCGCC‑GCATTCAAGGCCGGCACGGTCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCGATCAATGCAAGATCTTCACCTTGCCAAGCACCCGGTCATCCTCAACCTTTCAATGGAGCAGCGCAGATCA < 2:907168/150‑1 CTACCAGGGGCAGCGCC‑GCATTCAAGGCCGGCACGGTCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCGATCAATGCAAGATCTTCACCTTGCCAAGCACCCGGTCATCCTCAACCTTTCAATGGAGCAGCGCAGATCAGCT > 2:610727/1‑150 CTACCAGGGGCAGCGCC‑GCATTCAAGGCCGGCACGGTCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCGATCAATGCAAGA < 1:785743/89‑1 CTACCAGGGGCAGCGCC‑GCATTCAAGGCCGGCACGGTCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCGATCAATGCAAGA > 2:785743/1‑89 CAGGGGCAGCGCC‑GCATTCAAGGCCGGCACGGTCACTGGTACGAGCCGGTTTCCCCGCGAAGAGGCCGGCCCGATCAATGCAAGATCTTCACCTTGCCAAGCACCCGGTCATCCTCAACCTTTCAATGGAGCAGCGCAGATCAGCTGTTC > 2:122528/1‑150 AGGGGCAGCGCC‑GCATTCAAGGCCGGCACGGTCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCGATCAATGCAAGATCTTCACCTTGCCAAGCACCCGGTCATCCTCAACCTTTCAATGGAGCAGCGCAGATCAGCTGTTCA < 1:426059/150‑1 GACAGTGGGCGACCCGCCGAGCCAGGAGCCACCGGTGAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4585916‑4586100‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccggcctcttcgcgggtaaacccgctcctaccagggGCAGCGCC‑GCATTCAAGGCCGGCACGGTCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCGATCAATGCAAGATCTTCACCTTGCCAAGCACCCGGTCATCCTCAACCTTTCAATGGAGCAGCGCAGATCAGCTGTTCA < NC_002947/4586128‑4585983 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |