New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4087738 =	27 (1.230)	4 (0.200)	4/238	NT	15.1%	intergenic (+343/‑83)	PP_3597/PP_3598	amino acid ABC transporter ATP‑binding protein/peptidase C26
	?	NC_002947	4087773 =	20 (0.980)					intergenic (+378/‑48)	PP_3597/PP_3598	amino acid ABC transporter ATP‑binding protein/peptidase C26

CACGGCTCGGGGCCTTGGGTGCTGCCTGTAGCCCCGAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4087776‑4087738 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccccgagcCGTGCGCCTGCACAACAACGACAGGTCGAACCTGTCCCAAGGTGACATATGTCCAACAGCAACATTGGCAACAAGCAACCTTCCCTGCGCAAACCCGTCGTCCTGATGA  >  NC_002947/4087773‑4087881                                                                                                                                                      CACGGCTCGGGGCCTTGGGTGCTGCCTGTAGCCCCGAGCCGTGCGCCTGCACAACAACGACAGGTCGAACCTGTCCCAAGGTGACATATGTCCAACAGCAACATTGGCAACAAGCAACCTTCCCTGCGCAAACCCGTCGTCCTGATGA  >  1:89908/1‑148 CACGGCTCGGGGCCTTGGGTGCTGCCTGTAGCCCCGAGCCGTGCGCCTGCACAACAACGACAGGTCGAACCTGTCCCAAGGTGACATATGTCCAACAGCAACATTGGCAACAAGCAACCTTCCCTGCGCAAACCCGTCGTCCTGATGA  <  2:89908/148‑1       TCGGGGCCTTGGGTGCTGCCTGTAGCCCCGAGCCGTGCGCCTGCACAACAACGACAGGTCGAACCTGTCCCAAGGTGACATATGTCCAACAGCAACATT                                             <  1:107541/99‑1       TCGGGGCCTTGGGTGCTGCCTGTAGCCCCGAGCCGTGCGCCTGCACAACAACGACAGGTCGAACCTGTCCCAAGGTGACATATGTCCAACAGCAACATT                                             >  2:107541/1‑99                                                                                                                                                      CACGGCTCGGGGCCTTGGGTGCTGCCTGTAGCCCCGAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4087776‑4087738 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccccgagcCGTGCGCCTGCACAACAACGACAGGTCGAACCTGTCCCAAGGTGACATATGTCCAACAGCAACATTGGCAACAAGCAACCTTCCCTGCGCAAACCCGTCGTCCTGATGA  >  NC_002947/4087773‑4087881

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.