| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4604719 | 23 (1.040) | 4 (0.190) | 4/244 | NT | 14.1% | coding (89/1767 nt) | PP_4077 | hypothetical protein |
| ? | NC_002947 | = 4604733 | 27 (1.290) | coding (103/1767 nt) | PP_4077 | hypothetical protein | |||||
GAGCAGTTGCAGCTTGAGCTGCTGGTAAACGGACACAACCGCTACACCCGAGTGAGGTGACCCATGTCACTGAAGGACAGATTCAGCGAAGAACTGCGTTACCTGCACGAGTTGGGAAACGACTTCGCCAAGGACAACCCCCAGCTTGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4604568‑4604719‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccgCCTTGCCTA‑GC‑AGCCGGGCAAGCTGGGGGTTGTCCTTGGCGAAGTCGTTTCCCAACTCGTGCAGGTAACGCAGTTCTTCGCTGAATCTGTCCTTCAGTGACATGGGTCACCTCACTCGGGT < NC_002947/4604733‑4604613 GAGCAGTTGCAGCTTGAGCTGCTGGTAAACGGACACAACCGCTACACCCGAGTGAGGTGACCCATGTCACTGAAGGACAGATTCAGCGAAGAACTGCGTTACCTGCACGAGTTGGGAAACGACTTCGCCAAGGACAACCCCCAGCTTGCC < 2:538570/150‑1 GAAGAACTGCGTTACCTGCACGAGTTGGGAAACGACTTCGCCAAGGACAACCCCCAGCTTGCCCGCCTTGCCTA‑GC‑AGCCGGGCAAGCTGGG < 1:257071/92‑1 GAAGAACTGCGTTACCTGCACGAGTTGGGAAACGACTTCGCCAAGGACAACCCCCAGCTTGCCCGCCTTGCCTA‑GC‑AGCCGGGCAAGCTGGG > 2:257071/1‑92 ACAACCCCCAGCTTGCCCGGC‑TG‑CTAGGCAAGGCGGGCAAGCTGGGGGTTGTCCTTGGCGAAGTCGTTTCCCAACTCGTGCAGGTAACGCAGTTCTTCGCTGAATCTGTCCTTCAGTGACATGGGTCACCTCACTCGGGT < 1:483049/140‑1 ACAACCCCCAGCTTGCCCGGC‑TG‑CTAGGCAAGGCGGGCAAGCTGGGGGTTGTCCTTGGCGAAGTCGTTTCCCAACTCGTGCAGGTAACGCAGTTCTTCGCTGAATCTGTCCTTCAGTGACATGGGTCACCTCACTCGGGT > 2:483049/1‑140 GAGCAGTTGCAGCTTGAGCTGCTGGTAAACGGACACAACCGCTACACCCGAGTGAGGTGACCCATGTCACTGAAGGACAGATTCAGCGAAGAACTGCGTTACCTGCACGAGTTGGGAAACGACTTCGCCAAGGACAACCCCCAGCTTGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4604568‑4604719‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccgCCTTGCCTA‑GC‑AGCCGGGCAAGCTGGGGGTTGTCCTTGGCGAAGTCGTTTCCCAACTCGTGCAGGTAACGCAGTTCTTCGCTGAATCTGTCCTTCAGTGACATGGGTCACCTCACTCGGGT < NC_002947/4604733‑4604613 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |