| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4604719 | 23 (1.040) | 4 (0.190) | 4/244 | NT | 14.1% | coding (89/1767 nt) | PP_4077 | hypothetical protein |
| ? | NC_002947 | = 4604733 | 27 (1.290) | coding (103/1767 nt) | PP_4077 | hypothetical protein | |||||
GCAGCTTGAGCTGCTGGTAAACGGACACAACCGCTACACCCGAGTGAGGTGACCCATGTCACTGAAGGACAGATTCAGCGAAGAACTGCGTTACCTGCACGAGTTGGGAAACGACTTCGCCAAGGACAACCCCCAGCTTGCCCGGCT‑GC‑TAGGCAAGGCGGGCAGCGACCCCGATGTCGAGCGGTTGATGGAAGCCTTTGCGTTTCTAACGGCCAAGCTTCGGCTGAAGCTGGAAGATGACCTGCCAGAACTCACCCACCCCATGCTGCAGATACTGTGGCCCAACTACCTG > NC_002947/4604576‑4604867 | gCAGCTTGAGCTGCTGGTAAACGGACACAACCGCTACACCCGAGTGAGGTGACCCATGTCACTGAAGGACAGATTCAGCGAAGAACTGCGTTACCTGCACGAGTTGGGAAACGACTTCGCCAAGGACAACCCCCAGCTTGCCCGgct‑gc‑t > 1:496106/1‑150 (MQ=255) cGGACACAACCGCTACACCCGAGTGAGGTGACCCATGTCACTGAAGGACAGATTCAGCGAAGAACTGCGTTACCTGCACGAGTTGGGAAACGACTTCGCCAAGGACAACCCCCAGCTTGCCCGGCT‑GC‑TAGGCAAGGCGGGCAGCGAccc > 2:332176/1‑150 (MQ=255) cGGACACAACCGCTACACCCGAGTGAGGTGACCCATGTCACTGAAGGACAGATTCAGCGAAGAACTGCGTTACCTGCACGAGTTGGGAAACGACTTCGCCAAGGACAACCCCCAGCTTGCCCGGCT‑GC‑TAGGCAAGGCGGGCAGCGAccc > 1:338759/1‑150 (MQ=255) ccGCTACACCCGAGTGAGGTGACCCATGTCACTGAAGGACAGATTCAGCGAAGAACTGCGTTACCTGCACGAGTTGGGAAACGACTTCGCCAAGGACAACCCCCAGCTTGCCCGGCT‑GC‑TAGGCAAGGCGGGCAGCGACCCCGATGTCGa > 1:18060/1‑150 (MQ=255) cTACACCCGAGTGAGGTGACCCATGTCACTGAAGGACAGATTCAGCGAAGAACTGCGTTACCTGCACGAGTTGGGAAACGACTTCGCCAAGGACAACCCCCAGCTTGCCCGGCT‑GC‑TAGGCAAGGCGGGCAGCGACCCCGATGTCGAGCg > 1:278204/1‑150 (MQ=255) acCCGAGTGAGGTGACCCATGTCACTGAAGGACAGATTCAGCGAAGAACTGCGTTACCTGCACGAGTTGGGAAACGACTTCGCCAAGGACAACCCCCAGCTTGCCCGGCT‑GC‑TAGGCAAGGCGGGCAGCGACCCCGATGTCGAGCGGTTg > 1:454189/1‑150 (MQ=255) acCCGAGTGAGGTGACCCATGTCACTGAAGGACAGATTCAGCGAAGAACTGCGTTACCTGCACGAGTTGGGAAACGACTTCGCCAAGGACAACCCCCAGCTTGCCCGGCT‑GC‑TAGGCAAGGCGGGCAGCGACCCCGATGTCGAGCGGTTg > 1:309351/1‑150 (MQ=255) acCCGAGTGAGGTGACCCATGTCACTGAAGGACAGATTCAGCGAAGAACTGCGTTACCTGCACGAGTTGGGAAACGACTTCGCCAAGGACAACCCCCAGCTTGCCCGCCTTGCCTAG‑CA‑GCcgggcaagctgggggttgt > 2:483049‑M2/1‑121 (MQ=255) acCCGAGTGAGGTGACCCATGTCACTGAAGGACAGATTCAGCGAAGAACTGCGTTACCTGCACGAGTTGGGAAACGACTTCGCCAAGGACAACCCCCAGCTTGCCCGCCTTGCCTAG‑CA‑GCcgggcaagctgggggttgt < 1:483049‑M2/140‑20 (MQ=255) cGAGTGAGGTGACCCATGTCACTGAAGGACAGATTCAGCGAAGAACTGCGTTACCTGCACGAGTTGGGAAACGACTTCGCCAAGGACAACCCCCAGCTTGCCCGGCT‑GC‑TAGGCAAGGCGGGCAGCGACCCCGATGTCGAGCGGTTGATg > 2:157502/1‑150 (MQ=255) gAGGTGACCCATGTCACTGAAGGACAGATTCAGCGAAGAACTGCGTTACCTGCACGAGTTGGGAAACGACTTCGCCAAGGACAACCCCCAGCTTGCCCGGCT‑GC‑TAGGCAAGGCGGGCAGCGACCCCGATGTCGAGCGGTTGATGGAAGc < 2:268028/150‑1 (MQ=255) aCCCATGTCACTGAAGGACAGATTCAGCGAAGAACTGCGTTACCTGCACGAGTTGGGAAACGACTTCGCCAAGGACAACCCCCAGCTTGCCCGGCT‑GC‑TAGGCAAGGCGGGCAGCGACCCCGATGTCGAGCGGTTGATGGAAGCCTTTGc < 1:332176/150‑1 (MQ=255) ccATGTCACTGAAGGACAGATTCAGCGAAGAACTGCGTTACCTGCACGAGTTGGGAAACGACTTCGCCAAGGACAACCCCCAGCTTGCCCGGCT‑GC‑TAGGCAAGGCGGGCAGCGACCCCGATGTCGAGCGGTTGATGGAAGCCTTTGCGt < 1:157502/150‑1 (MQ=255) gATTCAGCGAAGAACTGCGTTACCTGCACGAGTTGGGAAACGACTTCGCCAAGGACAACCCCCAGCTTGCCCGGCT‑GC‑TAGGCAAGGCGGGCAGCGACCCCGATGTCGAGCGGTTGATGGAAGCCTTTGCGTTTCTAACGGCCAAGCTTc < 2:309351/150‑1 (MQ=255) ttCAGCGAAGAACTGCGTTACCTGCACGAGTTGGGAAACGACTTCGCCAAGGACAACCCCCAGCTTGCCCGGCT‑GC‑TAGGCAAGGCGGGCAGCGACCCCGATGTCGAGCGGTTGATGGAAGCCTTTGCGTTTCTAACGGCCAAGCTTCgg < 2:385892/150‑1 (MQ=255) gaagaaCTGCGTTACCTGCACGAGTTGGGAAACGACTTCGCCAAGGACAACCCCCAGCTTGCCCGccttgcctagcagccgggcaagctggg < 1:257071‑M1/92‑28 (MQ=255) gaagaaCTGCGTTACCTGCACGAGTTGGGAAACGACTTCGCCAAGGACAACCCCCAGCTTGCCCGccttgcctagcagccgggcaagctggg > 2:257071‑M1/1‑65 (MQ=255) aCCTGCACGAGTTGGGAAACGACTTCGCCAAGGACAACCCCCAGCTTGCCCGGCT‑GC‑TAGGCAAGGCGGGCAGCGACCCCGATGTCGAGCGGTTGATGGAAGCCTTTGCGTTTCTAACGGCCAAGCTTCGGCTGAAGCTGGAAGATGAcc < 2:454189/150‑1 (MQ=255) cTGCACGAGTTGGGAAACGACTTCGCCAAGGACAACCCCCAGCTTGCCCGGCT‑GC‑TAGGCAAGGCGGGCAGCGACCCCGATGTCGAGCGGTTGATGGAAGCCTTTGCGTTTCTAACGGCCAAGCTTCGGCTGAAGCTGGAAGATGACCTg > 2:144848/1‑150 (MQ=255) cACGAGTTGGGAAACGACTTCGCCAAGGACAACCCCCAGCTTGCCCGGCT‑GC‑TAGGCAAGGCGGGCAGCGACCCCGATGTCGAGCGGTTGATGGAAGCCTTTGCGTTTCTAACGGCCAAGCTTCGGCTGAAGCTGGAAGATGACCTGCCa > 1:253520/1‑150 (MQ=255) gAGTTGGGAAACGACTTCGCCAAGGACAACCCCCAGCTTGCCCGGCT‑GC‑TAGGCAAGGCGGGCAGCGACCCCGATGTCGAGCGGTTGATGGAAGCCTTTGCGTTTCTAACGGCCAAGCTTCGGCTGAAGCTGGAAGATGACCTGCCAGaa < 1:144848/150‑1 (MQ=255) gAGTTGGGAAACGACTTCGCCAAGGACAACCCCCAGCTTGCCCGGCT‑GC‑TAGGCAAGGCGGGCAGCGACCCCGATGTCGAGCGGTTGATGGAAGCCTTTGCGTTTCTAACGGCCAAGCTTCGGCTGAAGCTGGAAGATGACCTGCCAGaa > 1:263028/1‑150 (MQ=255) gAGTTGGGAAACGACTTCGCCAAGGACAACCCCCAGCTTGCCCGGCT‑GC‑TAGGCAAGGCGGGCAGCGACCCCGATGTCGAGCGGTTGATGGAAGCCTTTGCGTTTCTAACGGCCAAGCTTCGGCTGAAGCTGGAAGATGACCTGCCAGaa > 1:16336/1‑150 (MQ=255) tGGGAAACGACTTCGCCAAGGACAACCCCCAGCTTGCCCGGCT‑GC‑TAGGCAAGGCGGGCAGCGACCCCGATGTCGAGCGGTTGATGGAAGCCTTTGCGTTTCTAACGGCCAAGCTTCGGCTGAAGCTGGAAGATGACCTGCCAGAACTca < 2:278204/150‑1 (MQ=255) gagacccGACTTCTCCAAGGATCACCCCCAGCTTGCCCGGCT‑GC‑TAGGCAAGGCGGGCAGCGACCCCGATGTCGAGCGGTTGATGGAAGCCTTTGCGTTTCTAACGGCCAAGCTTCGGCTGAAGCTGGAAGATGACCTGCCAGAACTcac < 2:263028/144‑1 (MQ=37) cGACTTCGCCAAGGACAACCCCCAGCTTGCCCGGCT‑GC‑TAGGCAAGGCGGGCAGCGACCCCGATGTCGAGCGGTTGATGGAAGCCTTTGCGTTTCTAACGGCCAAGCTTCGGCTGAAGCTGGAAGATGACCTGCCAGAACTCacccaccc < 2:496106/150‑1 (MQ=255) aCAACCCCCAGCTTGCCCGgctgctaggcaaggcgggcaagctgggggttgtccttggcgaagtcgtttcccaactcgtgcaggtaacgcagttcttcgctgaatctgtccttcagtgacatgggtcacctcactcgggt < 1:483049‑M1/140‑122 (MQ=255) aCAACCCCCAGCTTGCCCGgctgctaggcaaggcgggcaagctgggggttgtccttggcgaagtcgtttcccaactcgtgcaggtaacgcagttcttcgctgaatctgtccttcagtgacatgggtcacctcactcgggt > 2:483049‑M1/1‑19 (MQ=255) cAACCCCCAGCTTGCCCGGCT‑GC‑TAGGCAAGGCGGGCAGCGACCCCGATGTCGAGCGGTTGATGGAAGCCTTTGCGTTTCTAACGGCCAAGCTTCGGCTGAAGCTGGAAGATGACCTGCCAGAACTCACCCACCCCATGCTGCAGATACt < 2:16336/150‑1 (MQ=255) cccAGCTTGCCCGGCT‑GC‑TAGGCAAGGcgggcaagctgggggttgtccttggcgaagtcgtttcccaactcgtgcaggtaacgcagttcttc > 2:257071‑M2/1‑27 (MQ=255) cccAGCTTGCCCGGCT‑GC‑TAGGCAAGGcgggcaagctgggggttgtccttggcgaagtcgtttcccaactcgtgcaggtaacgcagttcttc < 1:257071‑M2/92‑66 (MQ=255) cGGCT‑GC‑TAGGCAAGGCGGGCAGCGACCCCGATGTCGAGCGGTTGATGGAAGCCTTTGCGTTTCTAACGGCCAAGCTTCGGCTGAAGCTGGAAGATGACCTGCCAGAACTCACCCACCCCATGCTGCAGATACTGTGGCCCAACTAc > 2:271261/1‑147 (MQ=255) cGGCT‑GC‑TAGGCAAGGCGGGCAGCGACCCCGATGTCGAGCGGTTGATGGAAGCCTTTGCGTTTCTAACGGCCAAGCTTCGGCTGAAGCTGGAAGATGACCTGCCAGAACTCACCCACCCCATGCTGCAGATACTGTGGCCCAACTAc < 1:271261/147‑1 (MQ=255) cGGCT‑GC‑TAGGCAAGGCGGGCAGCGACCCCGATGTCGAGCGGTTGATGGAAGCCTTTGCGTTTCTAACGGCCAAGCTTCGGCTGAAGCTGGAAGATGACCTGCCAGAACTCACCCACCCCATGCTGCAGATACTGTGGCCCAACTACCTg > 1:453593/1‑150 (MQ=255) | GCAGCTTGAGCTGCTGGTAAACGGACACAACCGCTACACCCGAGTGAGGTGACCCATGTCACTGAAGGACAGATTCAGCGAAGAACTGCGTTACCTGCACGAGTTGGGAAACGACTTCGCCAAGGACAACCCCCAGCTTGCCCGGCT‑GC‑TAGGCAAGGCGGGCAGCGACCCCGATGTCGAGCGGTTGATGGAAGCCTTTGCGTTTCTAACGGCCAAGCTTCGGCTGAAGCTGGAAGATGACCTGCCAGAACTCACCCACCCCATGCTGCAGATACTGTGGCCCAACTACCTG > NC_002947/4604576‑4604867 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |