New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4714580 = | 23 (1.040) | 4 (0.190) | 4/248 | NT | 14.0% | coding (652/891 nt) | PP_4172 | hypothetical protein |
? | NC_002947 | 4714619 = | 27 (1.260) | coding (691/891 nt) | PP_4172 | hypothetical protein |
GGCCAGGGCGCCGGCGCGAACGAAGCCGGCGTTCGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4714618‑4714580 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccAGTACCTACAGCGACCAGGACGACTGGCTGTGGGTGCTCGACCAGTTGCTCGACCAG > NC_002947/4714619‑4714675 GGCCAGGGCGCCGGCGCGAACGAAGCCGGCGTTCGGGCCAGTACCTACAGCGACCAGGACGACTGGCTGTGGGTGCTCGACCAGTTGCTC < 1:554118/90‑1 GGCCAGGGCGCCGGCGCGAACGAAGCCGGCGTTCGGGCCAGTACCTACAGCGACCAGGACGACTGGCTGTGGGTGCTCGACCAGTTGCTC > 2:554118/1‑90 CAGGGCGCCGGCGCGAACGAAGCCGGCGTTCGGGCCAGTACCTACAGCGACCAGGACGACTGGCTGTGGGTGCTCGACCAGTTGCTCGACCAG > 1:201910/1‑93 CAGGGCGCCGGCGCGAACGAAGCCGGCGTTCGGGCCAGTACCTACAGCGACCAGGACGACTGGCTGTGGGTGCTCGACCAGTTGCTCGACCAG < 2:201910/93‑1 GGCCAGGGCGCCGGCGCGAACGAAGCCGGCGTTCGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4714618‑4714580 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccAGTACCTACAGCGACCAGGACGACTGGCTGTGGGTGCTCGACCAGTTGCTCGACCAG > NC_002947/4714619‑4714675 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |