New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5200727 | 33 (1.500) | 3 (0.140) | 3/246 | NT | 8.9% | coding (324/774 nt) | yafJ | amidotransferase |
? | NC_002947 | = 5200748 | 30 (1.420) | coding (303/774 nt) | yafJ | amidotransferase |
CGGTTCGGGGAAGGCGCTGCGGATGCGGTTGAGCAAGTCGCAGAAGGCCGCTTCGCTGTCGGTGTCGCCCACTGGCCGGTAGAAACTGGCCAGGCCCTTGAAGTCACCCAGCTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5200610‑5200727 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgCAACTGGTGCTTCGCGCACAACGGCCAGCTGGGTGACTTCAAGGGCCTGGCCAGTTTCTACCGGCCAGTGGGCGACACCGACAGCGAAGCGGCCTTCTGCGACTTGCTCAACCGCATCCGCAGCGCCTTCCCCGAACCGGTGCCGGT < NC_002947/5200748‑5200602 CGGTTCCGGGAAGGCGCTGGGGATGCGGTTGCGGAGTCCGTAGAAGACCGCTTCGCTGTCGGTGTCGCCCACTGGCCGGTAGAAACTGGCCAGGCCCTTGAAGTCACCCAGCTGGCCGCAACTGGTGCTTCGCGCACAACGGCCAGCTGG < 2:429686/150‑1 CCGCTTCGCTGTCGGTGTCGCCCACTGGCCGGTAGAAACTGGCCAGGCCCTTGAAGTCACCCAGCTGGCCGCAACTGGTGCTTCGCGCACAACGGCCAGCTGGG > 1:176104/1‑104 CCGCTTCGCTGTCGGTGTCGCCCACTGGCCGGTAGAAACTGGCCAGGCCCTTGAAGTCACCCAGCTGGCCGCAACTGGTGCTTCGCGCACAACGGCCAGCTGGG < 2:176104/104‑1 CCGCAACTGGTGCTTCGCGCACAACGGCCAGCTGGGTGACTTCAAGGGCCTGGCCAGTTTCTACCGGCCAGTGGGCGACACCGACAGCGAAGCGGCCTTCTGCGACTTGCTCAACCGCATCCGCAGCGCCTTCCCCGAACCGGTGCCGGT < 1:364803/150‑1 CGGTTCGGGGAAGGCGCTGCGGATGCGGTTGAGCAAGTCGCAGAAGGCCGCTTCGCTGTCGGTGTCGCCCACTGGCCGGTAGAAACTGGCCAGGCCCTTGAAGTCACCCAGCTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5200610‑5200727 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgCAACTGGTGCTTCGCGCACAACGGCCAGCTGGGTGACTTCAAGGGCCTGGCCAGTTTCTACCGGCCAGTGGGCGACACCGACAGCGAAGCGGCCTTCTGCGACTTGCTCAACCGCATCCGCAGCGCCTTCCCCGAACCGGTGCCGGT < NC_002947/5200748‑5200602 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |