New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5112607 = | 33 (1.070) | 7 (0.270) | 6/226 | 2.4 | 25.2% | intergenic (‑148/+118) | rluB/PP_4497 | 23S rRNA pseudouridylate synthase B/hypothetical protein |
? | NC_002947 | 5112712 = | 14 (0.540) | intergenic (‑253/+13) | rluB/PP_4497 | 23S rRNA pseudouridylate synthase B/hypothetical protein |
ATCTGGGCACCTCCCGGTGTAGGAATGAAAACAGGTTTCTGGCGACGAACGCGCCAAAAGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCT > NC_002947/5112458‑5112747 | aTCTGGGCACCTCCCGGTGTAGGAATGAAAACAGGTTTCTGGCGACGAACGCGCCAAAAGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCttt < 2:371952/150‑1 (MQ=255) aTCTGGGCACCTCCCGGTGTAGGAATGAAAACAGGTTTCTGGCGACGAACGCGCCAAAAGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCttt > 1:511842/1‑150 (MQ=255) aTCTGGGCACCTCCCGGTGTAGGAATGAAAACAGGTTTCTGGCGACGAACGCGACAAAAAGCCGCGCATCCTATTCAGTGTATTTTGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCttt > 1:466205/1‑150 (MQ=255) gaccagcttccgtagcctgttggtggagctggatgccatggaagacggtttgaaaaccgattttgatgatctgcggggagaggagcctgagcctccggtggaggaggagatcaaggctcagccctgattgatctgctgccTGTGCTGGcc < 1:363690‑M1/10‑1 (MQ=255) tCCCGGTGTAGGAATGAAAACAGGTTTCTGGCGACGAACGCGCCAAAAGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCctc < 1:453830/150‑1 (MQ=255) agcttccgtagcctgttggtggagctggatgccatggaagacggtttgaaaaccgattttgatgatctgcggggagaggagcctgagcctccggtggaggaggagatcaaggctcagccctgattgatctgctgccTGTGCTGGCCTCtt < 1:678912‑M1/14‑1 (MQ=255) gtgtAGGAATGAAAACAGGTTTCTGGCGACGAACGCGCCAAAAGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTg < 2:264464/140‑1 (MQ=255) gtgtAGGAATGAAAACAGGTTTCTGGCGACGAACGCGCCAAAAGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTg > 1:264464/1‑140 (MQ=255) gtAGGAATGAAAACAGGTTTCTGGCGACGAACGCGCCAAAAGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCgg < 2:96988/150‑1 (MQ=255) gAATGAAAACAGGTTTCTGGCGACGAACGCGCCAAAAGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCAAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCAc > 1:702994/1‑150 (MQ=255) tggtggagctggatgccatggaagacggtttgaaaaccgattttgatgatctgcggggagaggagcctgagcctccggtggaggaggagatcaaggctcagccctgattgatctgctgccTGTGCTGGCCTCTTCGCGGGCACGCCCGCt < 1:103792‑M1/30‑1 (MQ=255) cAGGTTTCTGGCGACGAACGCGCCAAAAGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCGTGCCCGcgaa < 1:112870/150‑4 (MQ=255) tttCTGGCGACGAACGCGCCAAAAGGCCGCGCATCATACGCCGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACa < 2:511842/150‑1 (MQ=255) gCGACGAACGCGCCAAAAGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTcg > 2:328298/1‑150 (MQ=255) cgacgaACGCGCCAAAAGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTcgc < 1:456261/150‑1 (MQ=255) cgacgaACGCGCCAAAAGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTcgc < 1:1246/150‑1 (MQ=255) aGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCt < 2:286098/150‑1 (MQ=255) gaaaaccgattttgatgatctgcggggagaggagcctgagcctccggtggaggaggagatcaaggctcagccctgattgatctgctgccTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCtgt < 1:335‑M1/61‑1 (MQ=255) gCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCAAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCtgt < 2:702994/150‑1 (MQ=255) ccGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCtgtg < 2:731379/150‑1 (MQ=255) aCGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCtgtg < 1:328298/150‑1 (MQ=255) gcgGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCAGCTATTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTggg < 1:173904/150‑1 (MQ=255) tcaGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCtt < 1:123712/118‑1 (MQ=255) tcaGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCtt > 2:123712/1‑118 (MQ=255) ggAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTATTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGccc < 2:707933/150‑1 (MQ=255) aggagcctgagcctccggtggaggaggagatcaaggctcagccctgattgatctgctgccTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTTCATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGCCcgc > 2:335‑M1/61‑150 (MQ=255) gagcctgagcctccggtggaggaggagatcaaggctcagccctgattgatctgctgccTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGa > 2:103792‑M1/59‑150 (MQ=255) gCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGaa < 1:112340/150‑1 (MQ=255) gCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCAAGCCcgctcc < 2:466205/150‑4 (MQ=255) gcctgagcctccggtggaggaggagatcaaggctcagccctgattgatctgctgccTGTGCTGGCCTCTTCGCGGGCTTGCccgcgaa < 2:573440‑M1/32‑4 (MQ=255) aCTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCtt < 2:344672/69‑1 (MQ=255) aCTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCtt > 1:344672/1‑69 (MQ=255) gAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGTTCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGcc < 1:646142/150‑1 (MQ=255) tAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGcac > 1:204433/1‑150 (MQ=255) gagGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGCCcgc < 1:727557/134‑1 (MQ=255) gagGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGCCcgc > 2:727557/1‑134 (MQ=255) agGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAgg < 2:265693/150‑1 (MQ=255) caaggctcagccctgattgatctgctgccTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCtt < 1:115071‑M1/84‑1 (MQ=255) caaggctcagccctgattgatctgctgccTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCtt > 2:115071‑M1/30‑113 (MQ=255) cATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGc > 1:695739/1‑102 (MQ=255) cATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGc < 2:695739/102‑1 (MQ=255) aaagggCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCAAAGGCAGCAGATCAATCAGGGCTGAGCCTTGATctccc > 1:25834/4‑149 (MQ=255) | ATCTGGGCACCTCCCGGTGTAGGAATGAAAACAGGTTTCTGGCGACGAACGCGCCAAAAGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCT > NC_002947/5112458‑5112747 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |