New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 217935 = | 45 (1.600) | 3 (0.110) | 3/230 | NT | 7.1% | coding (23441/26049 nt) | PP_0168 | putative surface adhesion protein |
? | NC_002947 | 217993 = | 37 (1.410) | coding (23499/26049 nt) | PP_0168 | putative surface adhesion protein |
CAAAGACCGTCTTCAGATCCTCGCCGGTAATGCCGTTGCCGCCAGTACCCAGGCCTTTGAGGCTGGTCCAGACTTCCTTGGTCAGCCCTTTGGACTCGATATCGGCGCTGCCGAAGCTCAGGGTCGGTTTGTCGGCAACCGGGCTGATATCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/218087‑217935 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatatcgaGTCCAAAGGGCTGACCAAGGAAGTCTGGACCAGCCTCAAAGGCCTGGGTACTGGCGGCAACGGCATTACCGGCGAGGATCTGAAGACGGTCTTTGCCAACTCCGGCAGCGCGAACTCCAGCAGCACCACTACCAACGTGCAGTCCGATG > NC_002947/217993‑218141 CAAAGACCGTCTTCAGATCCTCGCCGGTAATGCCGTTGCCGCCAGTACCCAGGCCTTTGAGGCTGGTCCAGACTTCCTTGGTCAGCCCTTTGGACTCGATATCGGCGCTGCCGAAGCTCAGGGTCGGTTTGTCGGCAACCGGGCTGATAT > 2:222687/1‑150 GACTCGATATCGGCGCTGCCGAAGCTCAGGGTCGGTTTGTCGGCAACCGGGCTGATATCGAGTCCAAAGGGCTGACCAAGGAAGTCTGGACCAGCCTCAAAGGCCTGGGTACTGGCGGCAACGGCATTACCGGCGAGGATCTGAAGACGG > 2:400942/1‑150 ACTCGATATCGGCGCTGCCGAAGCTCAGGGTCGGTTTGTCGGCAACCGGGCTGATATCGAGTCCAAAGGGCTGACCAAGGAAGTCTGGACCAGCCTCAAAGGCCTG > 1:76254/1‑106 ACTCGATATCGGCGCTGCCGAAGCTCAGGGTCGGTTTGTCGGCAACCGGGCTGATATCGAGTCCAAAGGGCTGACCAAGGAAGTCTGGACCAGCCTCAAAGGCCTG < 2:76254/106‑1 TCGAGTCCAAAGGGCTGACCAAGGAAGTCTGGACCAGCCTCAAAGGCCTGGGTACTGGCGGCAACGGCATTACCGGCGAGGATCTGAAGACGGTCTTTGCCAACTCCGGCAGCGCGAACTCCAGCAGCACCACTACCAACGTGCAGTCCG < 1:732716/150‑1 AGTCCAAAGGGCTGACCAAGGAAGTCTGGACCAGCCTCAAAGGCCTGGGTACTGGCGGCAACGGCATTACCGGCGAGGATCTGAAGACGGTCTTTGCCAACTCCGGCAGCGCGAACTCCAGCAGCACCACTACCAACGTGCAGTCCGATG < 1:396480/150‑1 CAAAGACCGTCTTCAGATCCTCGCCGGTAATGCCGTTGCCGCCAGTACCCAGGCCTTTGAGGCTGGTCCAGACTTCCTTGGTCAGCCCTTTGGACTCGATATCGGCGCTGCCGAAGCTCAGGGTCGGTTTGTCGGCAACCGGGCTGATATCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/218087‑217935 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatatcgaGTCCAAAGGGCTGACCAAGGAAGTCTGGACCAGCCTCAAAGGCCTGGGTACTGGCGGCAACGGCATTACCGGCGAGGATCTGAAGACGGTCTTTGCCAACTCCGGCAGCGCGAACTCCAGCAGCACCACTACCAACGTGCAGTCCGATG > NC_002947/217993‑218141 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |