New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 526903 = | 0 (0.000) | 9 (0.330) | 8/236 | NT | 100% | noncoding (138/2902 nt) | PP_23SC | 23S ribosomal RNA |
? | NC_002947 | 700009 = | NA (NA) | noncoding (156/2902 nt) | PP_23SD | 23S ribosomal RNA |
CACTAATCTCAAGTCAACTTAAGGGCTGGTCCCCGTTCGCTCGCCACTACTAAGGGAATCTCGGTTGATTTCTTTTCCTCAGGGTACTTAGATGTTTCAGTTCCCCTGGTTCGCCTCTTGCACCTATGTATTCAGTACAAGATAACCAGCTTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/527056‑526903 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttgtACTGAATACATAGGTGCAAGAGGCGAACCAGGGGAACTGAAACATCTAAGTACCCTGAGGAAAAGAAATCAACCGAGATTCCCTTAGTAGTGGCGAGCGAACGGGGACCAGCCCTTAAGTTGATTTGAGATTAGTGGAACGCTCTGGAA > NC_002947/700009‑700157 CACTAATCTCAAGTCAACTTAAGGGCTGGTCCCCGTTCGCTCGCCACTACTAAGGGAATCTCGGTTGATTTCTTTTCCTCAGGGTACTTAGATGTTTCAGTTCCCCTGGTTCGCCTCTTGCACCTATGTATTCAGTACAAGATAACCAGC > 2:295406/1‑150 GCTCGCCACTACTAAGGGAATCTCGGTTGATTTCTTTTCCTCAGGGTACTTAGATGTTTCAGTTCCCCTGGTTCGCCTCTTGCACCTATGTATTCAGTACAAGCTGGTTATCTTGTACTGAATACATAG > 1:21830/1‑129 GCTCGCCACTACTAAGGGAATCTCGGTTGATTTCTTTTCCTCAGGGTACTTAGATGTTTCAGTTCCCCTGGTTCGCCTCTTGCACCTATGTATTCAGTACAAGCTGGTTATCTTGTACTGAATACATAG < 2:21830/129‑1 TGTATTCAGTACAAGATAACCAGCTTGTGCTGAATACATATGTGCAAGAGGCGAACCAGGGGAACTGAAACATCTAAGTACCCTGAGGAAAAGAAATCAACCGAGATTCCCTTA < 2:619614/114‑1 TGTATTCAGTACAAGATAACCAGCTTGTGCTGAATACATATGTGCAAGAGGCGAACCAGGGGAACTGAAACATCTAAGTACCCTGAGGAAAAGAAATCAACCGAGATTCCCTTA > 1:619614/1‑114 TTCAGTACAAGATAACCAGCTTGTGCTGAATACATAGGTGCAAGAGGCGAACCAGGGGAACTGAAACATCTAAGTACCCTGAGGAAAAGAAATCAACCGAGATTCCCTTAGTAGTGGCGAGCGAACGGGGACCAGCCCTTAAGTTGATTT > 2:544289/1‑150 TTCAGTACAAGATAACCAGCTTGTGCTGAATACATAGGTGCAAGAGGCGAACCAGGGGAACTGAAACATCTAAGTACCCTGAGG‑AAAGAAATCAACCGAGATTCCCTTAGTAGTGGCGAG > 1:162045/1‑120 TTCAGTACAAGATAACCAGCTTGTGCTGAATACATAGGTGCAAGAGGCGAACCAGGGGAACTGAAACATCTAAGTACCCTGAGG‑AAAGAAATCAACCGAGATTCCCTTAGTAGTGGCGAG < 2:162045/120‑1 TACAAGATAACCAGCTTGTACTGAATACATAGGTGCAAGAGGCGAACCAGGGGAACTGAAACATCTA < 1:326628/67‑1 TACAAGATAACCAGCTTGTACTGAATACATAGGTGCAAGAGGCGAACCAGGGGAACTGAAACATCTA > 2:326628/1‑67 CTTGTACTGAATACATAGGTGCAAGAGGCGAACCAGGGGAACTGAAACATCTAAGTACCCTGAGGAAAAGAAATCAACCGAGATTCCCTTAGTAGTGGCGAGCGAACGGGGACCAGCCCTTAAGTTGATTTGAGATTAGTGGAACGCTCT < 1:337613/150‑1 CTTGTACTGAATACATAGGTGCAAGAGGCGAACCAGGGGAACTGAAACATCTAAGTACCCTGAGGAAAAGAAATCAACCGAGATTCCCTTAGTAGTGGCGAGCGAACGGGGACCAGCCCTTAAGTTGATTTGAGATTAGTGGAACGCTCT > 1:634161/1‑150 TTGTACTGAATACATAGGTGCAAGAGGCGAACCAGGGGAACTGAAACATCTAAGTACCCTGAGGAAAAGAAATCAACCGAGATTCCCTTAGTAGTGGCGAGCGAACGGGGACCAGCCCTTAAGTTGATTTGAGATTAGTGGAACGCTCTG > 1:194767/1‑150 TTGTACTGAATACATAGGTGCAAGAGGCGAACCAGGGGAACTGAAACATCTAAGTACCCTGAGGAAAAGAAATCAACCGAGATTCC > 2:320722/1‑86 TTGTACTGAATACATAGGTGCAAGAGGCGAACCAGGGGAACTGAAACATCTAAGTACCCTGAGGAAAAGAAATCAACCGAGATTCC < 1:320722/86‑1 TACTGAATACATAGGTGCAAGAGGCGAACCAGGGGAACTGAAACATCTAAGTACCCTGAGGAAAAGAAATCAACCGAGATTCCCTTAGTAGTGGCGAGCGAACGGGGACCAGCCCTTAAGTTGATTTGAGATTAGTGGAACGCTCTGGAA > 2:661451/1‑150 TACTGAATACATAGGTGCAAGAGGCGAACCAGGGGAACTGAAACATCTAAGTACCCTGAGGAAAAGAAATCAAACGAGATTCCCTTA < 2:360987/87‑1 TACTGAATACATAGGTGCAAGAGGCGAACCAGGGGAACTGAAACATCTAAGTACCCTGAGGAAAAGAAATCAAACGAGATTCCCTTA > 1:360987/1‑87 CACTAATCTCAAGTCAACTTAAGGGCTGGTCCCCGTTCGCTCGCCACTACTAAGGGAATCTCGGTTGATTTCTTTTCCTCAGGGTACTTAGATGTTTCAGTTCCCCTGGTTCGCCTCTTGCACCTATGTATTCAGTACAAGATAACCAGCTTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/527056‑526903 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttgtACTGAATACATAGGTGCAAGAGGCGAACCAGGGGAACTGAAACATCTAAGTACCCTGAGGAAAAGAAATCAACCGAGATTCCCTTAGTAGTGGCGAGCGAACGGGGACCAGCCCTTAAGTTGATTTGAGATTAGTGGAACGCTCTGGAA > NC_002947/700009‑700157 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |