New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 526903 = | 0 (0.000) | 9 (0.330) | 8/236 | NT | 100% | noncoding (138/2902 nt) | PP_23SC | 23S ribosomal RNA |
? | NC_002947 | 700009 = | NA (NA) | noncoding (156/2902 nt) | PP_23SD | 23S ribosomal RNA |
TTGGGGTTATATGGTCAAGTGAAGAAGCGCATACGGTGGATGCCTTGGCAGTCAGAGGCGATGAAAGACGTGGTAGCCTGCGATAAGCTTTGGGGAGTCGGCAAACAGACTGTGATCCAGAGATCTCTGAATGGGGGAACCCAGCCAGCACAAGCTGGTTATCTTGTACTGAATACATAGGTGCAAGAGGCGAACCAGGGGAACTGAAACATCTAAGTACCCTGAGGAAAAGAAATCAACCGAGATTCCCTTAGTAGTGGCGAGCGAACGGGGACCAGCCCTTAAGTTGACTTGAGAT > NC_002947/526754‑527051 | ttccagagcgttccactaatctcaaatcaacttaagggctggtccccgttcgctcgccactactaagggaatctcggttgatttcttttcctcagggtacttagatgtttcagttcccctggttcgcctcttgcacctatgtattcagta > 2:661451‑M1/150‑150 (MQ=255) cagagcgttccactaatctcaaatcaacttaagggctggtccccgttcgctcgccactactaagggaatctcggttgatttcttttcctcagggtacttagatgtttcagttcccctggttcgcctcttgcacctatgtattcagtACaa > 1:194767‑M1/147‑150 (MQ=255) agagcgttccactaatctcaaatcaacttaagggctggtccccgttcgctcgccactactaagggaatctcggttgatttcttttcctcagggtacttagatgtttcagttcccctggttcgcctcttgcacctatgtattcagtACAAg < 1:337613‑M1/5‑1 (MQ=255) agagcgttccactaatctcaaatcaacttaagggctggtccccgttcgctcgccactactaagggaatctcggttgatttcttttcctcagggtacttagatgtttcagttcccctggttcgcctcttgcacctatgtattcagtACAAg > 1:634161‑M1/146‑150 (MQ=255) aaatcaacttaagggctggtccccgttcgctcgccactactaagggaatctcggttgatttcttttcctcagggtacttagatgtttcagttcccctggttcgcctcttgcacctatgtattcagcACAAGCTGGTTATCTTGTACTGaa > 2:544289‑M1/127‑150 (MQ=255) ctcgccactactaagggaatctcggttgatttctttcctcagggtacttagatgtttcagttcccctggttcgcctcttgcacctatgtattcagcACAAGCTGGTTATCTTGTACTGaa < 2:162045‑M1/24‑1 (MQ=255) ctcgccactactaagggaatctcggttgatttctttcctcagggtacttagatgtttcagttcccctggttcgcctcttgcacctatgtattcagcACAAGCTGGTTATCTTGTACTGaa > 1:162045‑M1/97‑120 (MQ=255) taagggaatctcgtttgatttcttttcctcagggtacttagatgtttcagttcccctggttcgcctcttgcacctatgtattcagta > 1:360987‑M1/87‑87 (MQ=255) taagggaatctcgtttgatttcttttcctcagggtacttagatgtttcagttcccctggttcgcctcttgcacctatgtattcagta < 2:360987‑M1/1‑1 (MQ=255) taagggaatctcggttgatttcttttcctcagggtacttagatgtttcagttcccctggttcgcctcttgcacatatgtattcagcACAAGCTGGTTATCTTGTACTGAATACa > 1:619614‑M1/87‑114 (MQ=255) taagggaatctcggttgatttcttttcctcagggtacttagatgtttcagttcccctggttcgcctcttgcacatatgtattcagcACAAGCTGGTTATCTTGTACTGAATACa < 2:619614‑M1/28‑1 (MQ=255) ggaatctcggttgatttcttttcctcagggtacttagatgtttcagttcccctggttcgcctcttgcacctatgtattcagtACaa > 2:320722‑M1/83‑86 (MQ=255) ggaatctcggttgatttcttttcctcagggtacttagatgtttcagttcccctggttcgcctcttgcacctatgtattcagtACaa < 1:320722‑M1/4‑1 (MQ=255) tagatgtttcagttcccctggttcgcctcttgcacctatgtattcagtACAAGCTGGTTATCTTGTa > 2:326628‑M1/49‑67 (MQ=255) tagatgtttcagttcccctggttcgcctcttgcacctatgtattcagtACAAGCTGGTTATCTTGTa < 1:326628‑M1/19‑1 (MQ=255) ctatgtattcagtACAAGATAACCAGCTTGTACTGAATACATAGGTGCAAGAGGCGAACCAGGGGAACTGAAACATCTAAGTACCCTGAGGAAAAGAAATCAACCGAGATTCCCTTAGTAGTGgcgagc > 1:21830‑M1/14‑129 (MQ=255) ctatgtattcagtACAAGATAACCAGCTTGTACTGAATACATAGGTGCAAGAGGCGAACCAGGGGAACTGAAACATCTAAGTACCCTGAGGAAAAGAAATCAACCGAGATTCCCTTAGTAGTGgcgagc < 2:21830‑M1/116‑1 (MQ=255) cagcACAAGCTGGTTATCTTGTACTGAATACATAGGTGCAAGAGGCGAACCAGGGGAACTGAAACATCTAAGTACCCTGAGGAAAAGAAATCAACCGAGATTCCCTTAGTAGTGGCGAGCGAACGGGGACCAGCCCTTAAGTTGACTTga < 1:536008/150‑1 (MQ=32) cacaAGCTGGTTATCTTGTACTGAATCCATAGGCTCTAGAGGCGAACCAGGGGCGGCATAACATCTAAGTACCCTGAGGAAAAGAAATCAACCGAGATTCCCTTAGTAGTGGCGAGCGAACGGGGACCAGCCCTTAAGTTGACTTGAGAt < 1:572438/150‑1 (MQ=11) cacaAGCTGGTTATCTTGTACTGAATACATAGGTGCAAGAGGCGAACCAGGGGAACTGAAACATCTAAGTACCCTGAGGAAAAGAAATCAACCGAGATTCCCTTAGTAGTGGCGAGCGAACGGGGACCAGCCCTTAAGTTGACTTGAGAt < 2:27656/150‑1 (MQ=32) | TTGGGGTTATATGGTCAAGTGAAGAAGCGCATACGGTGGATGCCTTGGCAGTCAGAGGCGATGAAAGACGTGGTAGCCTGCGATAAGCTTTGGGGAGTCGGCAAACAGACTGTGATCCAGAGATCTCTGAATGGGGGAACCCAGCCAGCACAAGCTGGTTATCTTGTACTGAATACATAGGTGCAAGAGGCGAACCAGGGGAACTGAAACATCTAAGTACCCTGAGGAAAAGAAATCAACCGAGATTCCCTTAGTAGTGGCGAGCGAACGGGGACCAGCCCTTAAGTTGACTTGAGAT > NC_002947/526754‑527051 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |